apply(core::pose::Pose &pose) | protocols::enzdes::EnzRepackMinimize | virtual |
protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
backrub_ | protocols::enzdes::EnzRepackMinimize | private |
clear_info() | protocols::moves::Mover | inlinevirtual |
clone() const | protocols::enzdes::EnzRepackMinimize | virtual |
create() | protocols::moves::Mover | virtual |
create_ptask(core::pose::Pose &pose) | protocols::enzdes::EnzRepackMinimize | |
cst_opt_ | protocols::enzdes::EnzRepackMinimize | private |
design_ | protocols::enzdes::EnzRepackMinimize | private |
ensure_scofx_cstfication(core::pose::Pose const &pose) | protocols::enzdes::EnzRepackMinimize | |
EnzRepackMinimize() | protocols::enzdes::EnzRepackMinimize | |
EnzRepackMinimize(std::string const name) | protocols::enzdes::EnzRepackMinimize | |
Filters_map typedef | protocols::moves::Mover | |
fix_catalytic_ | protocols::enzdes::EnzRepackMinimize | private |
fresh_instance() const | protocols::enzdes::EnzRepackMinimize | virtual |
get_additional_output() | protocols::moves::Mover | virtual |
get_current_job() const | protocols::moves::Mover | |
get_current_tag() const | protocols::moves::Mover | inline |
get_design() const | protocols::enzdes::EnzRepackMinimize | inline |
get_input_pose() const | protocols::moves::Mover | |
get_last_move_status() const | protocols::moves::Mover | |
get_min_bb() const | protocols::enzdes::EnzRepackMinimize | inline |
get_min_lig() const | protocols::enzdes::EnzRepackMinimize | inline |
get_min_rb() const | protocols::enzdes::EnzRepackMinimize | inline |
get_min_sc() const | protocols::enzdes::EnzRepackMinimize | inline |
get_name() const | protocols::enzdes::EnzRepackMinimize | virtual |
get_native_pose() const | protocols::moves::Mover | |
get_type() const | protocols::moves::Mover | inline |
info() | protocols::moves::Mover | inlinevirtual |
info() const | protocols::moves::Mover | inlinevirtual |
last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
min_bb_ | protocols::enzdes::EnzRepackMinimize | private |
min_lig_ | protocols::enzdes::EnzRepackMinimize | private |
min_rb_ | protocols::enzdes::EnzRepackMinimize | private |
min_sc_ | protocols::enzdes::EnzRepackMinimize | private |
minimize_in_stages(core::pose::Pose &pose, core::pack::task::PackerTaskCOP task, bool const &cstopt, bool const &min_sc, bool const &min_rb, bool const &min_lig) | protocols::enzdes::EnzRepackMinimize | |
minimize_in_stages_ | protocols::enzdes::EnzRepackMinimize | private |
minimize_prot_jumps_ | protocols::enzdes::EnzRepackMinimize | private |
Mover() | protocols::moves::Mover | |
Mover(std::string const &type_name) | protocols::moves::Mover | |
Mover(Mover const &other) | protocols::moves::Mover | |
n_cycles_ | protocols::enzdes::EnzRepackMinimize | private |
name() | protocols::moves::Mover | inlinestatic |
operator=(Mover const &other) | protocols::moves::Mover | |
parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) | protocols::enzdes::EnzRepackMinimize | virtual |
parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
Pose typedef | protocols::moves::Mover | |
PoseCOP typedef | protocols::moves::Mover | |
register_options() | protocols::moves::Mover | inlinestatic |
reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
repack_ | protocols::enzdes::EnzRepackMinimize | private |
reset_status() | protocols::moves::Mover | |
save_state(SerializableState &state) | protocols::moves::Mover | virtual |
scorefxn_minimize() const | protocols::enzdes::EnzRepackMinimize | |
scorefxn_minimize_ | protocols::enzdes::EnzRepackMinimize | private |
scorefxn_repack() const | protocols::enzdes::EnzRepackMinimize | |
scorefxn_repack_ | protocols::enzdes::EnzRepackMinimize | private |
set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
set_design(bool const des) | protocols::enzdes::EnzRepackMinimize | inline |
set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
set_min_bb(bool const min_bb) | protocols::enzdes::EnzRepackMinimize | inline |
set_min_lig(bool const min_lig) | protocols::enzdes::EnzRepackMinimize | inline |
set_min_rb(bool const min_rb) | protocols::enzdes::EnzRepackMinimize | inline |
set_min_sc(bool const min_sc) | protocols::enzdes::EnzRepackMinimize | inline |
set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_scorefxn_minimize(core::scoring::ScoreFunctionCOP scorefxn) | protocols::enzdes::EnzRepackMinimize | |
set_scorefxn_repack(core::scoring::ScoreFunctionCOP scorefxn) | protocols::enzdes::EnzRepackMinimize | |
Strings typedef | protocols::moves::Mover | |
TagPtr typedef | protocols::moves::Mover | |
task_ | protocols::enzdes::EnzRepackMinimize | private |
task_factory(core::pack::task::TaskFactoryOP p) | protocols::enzdes::EnzRepackMinimize | |
task_factory_ | protocols::enzdes::EnzRepackMinimize | private |
test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
type() const | protocols::moves::Mover | inline |
type(const std::string &type_in) | protocols::moves::Mover | inline |
~EnzRepackMinimize() | protocols::enzdes::EnzRepackMinimize | virtual |
~Mover() | protocols::moves::Mover | virtual |