atoms() | protocols::features::LoopAnchorFeatures | private |
compute_anchor_transform(core::pose::Pose const &pose, utility::vector1< core::Size > const &residue_begin, utility::vector1< core::Size > const &residue_end, utility::vector1< core::Size > const &atoms) | protocols::features::LoopAnchorFeatures | private |
compute_atom_angles(core::pose::Pose const &pose, utility::vector1< core::Size > const &residues, utility::vector1< core::Size > const &atoms) | protocols::features::LoopAnchorFeatures | private |
compute_transform_and_write_to_db(boost::uuids::uuid struct_id, core::Size begin, core::Size end, core::pose::Pose const &pose, cppdb::statement &stmt) | protocols::features::LoopAnchorFeatures | private |
delete_record(boost::uuids::uuid, utility::sql_database::sessionOP) | protocols::features::FeaturesReporter | inlinevirtual |
delete_records_from_table(std::string const &table_name, boost::uuids::uuid struct_id, utility::sql_database::sessionOP db_session) | protocols::features::FeaturesReporter | protected |
determine_correct_length(utility::vector1< bool > const &relevant_residue, Size default_length) | protocols::features::LoopAnchorFeatures | private |
end_residue(Size resNo) | protocols::features::LoopAnchorFeatures | private |
features_reporter_dependencies() const | protocols::features::LoopAnchorFeatures | virtual |
find_tag(core::pose::Pose const &pose) const | protocols::features::FeaturesReporter | protected |
load_into_pose(utility::sql_database::sessionOP, boost::uuids::uuid, core::pose::Pose &) | protocols::features::FeaturesReporter | inlinevirtual |
LoopAnchorFeatures() | protocols::features::LoopAnchorFeatures | |
LoopAnchorFeatures(LoopAnchorFeatures const &) | protocols::features::LoopAnchorFeatures | |
max_loop_length(utility::vector1< bool > const &relevant_residue) | protocols::features::LoopAnchorFeatures | private |
max_loop_length_ | protocols::features::LoopAnchorFeatures | private |
min_loop_length(utility::vector1< bool > const &relevant_residue) | protocols::features::LoopAnchorFeatures | private |
min_loop_length_ | protocols::features::LoopAnchorFeatures | private |
parse_my_tag(utility::tag::TagPtr const tag, protocols::moves::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) | protocols::features::LoopAnchorFeatures | virtual |
report_features(core::pose::Pose const &pose, utility::vector1< bool > const &, boost::uuids::uuid struct_id, utility::sql_database::sessionOP db_session) | protocols::features::LoopAnchorFeatures | virtual |
protocols::features::FeaturesReporter::report_features(core::pose::Pose const &, boost::uuids::uuid, utility::sql_database::sessionOP) | protocols::features::FeaturesReporter | |
schema() const | protocols::features::FeaturesReporter | inlinevirtual |
set_use_relevant_residues_as_loop_length(bool const use_relevant_residues_as_loop_length) | protocols::features::LoopAnchorFeatures | |
set_use_single_residue_to_define_anchor_transfrom(bool const use_single_residue_to_define_anchor_transfrom) | protocols::features::LoopAnchorFeatures | |
start_residue(Size resNo) | protocols::features::LoopAnchorFeatures | private |
type_name() const | protocols::features::LoopAnchorFeatures | virtual |
use_relevant_residues_as_loop_length_ | protocols::features::LoopAnchorFeatures | private |
use_single_residue_to_define_anchor_transfrom_ | protocols::features::LoopAnchorFeatures | private |
write_loop_anchor_transforms_table_schema(utility::sql_database::sessionOP db_session) const | protocols::features::LoopAnchorFeatures | private |
write_loop_anchor_transforms_three_res_table_schema(utility::sql_database::sessionOP db_session) const | protocols::features::LoopAnchorFeatures | private |
write_loop_anchors_table_schema(utility::sql_database::sessionOP db_session) const | protocols::features::LoopAnchorFeatures | private |
write_schema_to_db(utility::sql_database::sessionOP db_session) const | protocols::features::LoopAnchorFeatures | virtual |
~FeaturesReporter() | protocols::features::FeaturesReporter | virtual |
~LoopAnchorFeatures() | protocols::features::LoopAnchorFeatures | virtual |