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rotamer_recovery Directory Reference
Directory dependency graph for rotamer_recovery:
src/protocols/rotamer_recovery

Files

file  RotamerRecovery.cc
 
file  RotamerRecovery.fwd.hh
 Measure how well rosetta is a recovering the conformation of an experimentally validated structure.
 
file  RotamerRecovery.hh
 
file  RotamerRecoveryCreator.cc
 Creator classes for components of the RotamerRecovery framework.
 
file  RotamerRecoveryCreator.fwd.hh
 
file  RotamerRecoveryCreator.hh
 
file  RotamerRecoveryFactory.cc
 Factory for creating RotamerRecoverys objects.
 
file  RotamerRecoveryFactory.fwd.hh
 report atom-atom pair geometry and scores to rotamer_recovery Statistics Scientific Benchmark
 
file  RotamerRecoveryFactory.hh
 Factory for creating RotamerRecovery objects.
 
file  RotamerRecoveryMover.cc
 A wrapper that measures how similar the rotamers are between before and after running the child mover.
 
file  RotamerRecoveryMover.fwd.hh
 Measure how well rosetta is a recovering the conformation of an experimentally validated structure.
 
file  RotamerRecoveryMover.hh
 A wrapper that measures how similar the rotamers are between before and after running the child mover.
 
file  RotamerRecoveryMoverCreator.hh
 This class will create instances of Mover ConstraintSetMover for the MoverFactory.
 
file  RRComparer.cc
 
file  RRComparer.fwd.hh
 Measure how well rosetta is a recovering the conformation of an experimentally validated structure.
 
file  RRComparer.hh
 
file  RRComparerAutomorphicRMSD.cc
 
file  RRComparerAutomorphicRMSD.fwd.hh
 Measure how well rosetta is a recovering the conformation of an experimentally validated structure by measuing the minimum root mean squared deviation of sidechain atoms for all chemical atomorphic forms.
 
file  RRComparerAutomorphicRMSD.hh
 
file  RRProtocol.cc
 
file  RRProtocol.fwd.hh
 Manage how the rotamer recovery test should be preformed.
 
file  RRProtocol.hh
 
file  RRProtocolMinPack.cc
 
file  RRProtocolMinPack.fwd.hh
 Preform the rotamer recovery test by minimizing each residue in a fixed context.
 
file  RRProtocolMinPack.hh
 
file  RRProtocolMover.cc
 Preform the rotamer recovery after applying mover.
 
file  RRProtocolMover.fwd.hh
 Preform the rotamer recovery after applying mover.
 
file  RRProtocolMover.hh
 Preform the rotamer recovery after applying mover.
 
file  RRProtocolPackRotamers.cc
 
file  RRProtocolPackRotamers.fwd.hh
 Preform the rotamer recovery test using the pack_rotamers discrete optimization algorithm.
 
file  RRProtocolPackRotamers.hh
 
file  RRProtocolReferenceStructure.cc
 Preform the rotamer recovery against a reference structure.
 
file  RRProtocolReferenceStructure.fwd.hh
 Preform the rotamer recovery after applying mover.
 
file  RRProtocolReferenceStructure.hh
 Preform the rotamer recovery against a reference structure.
 
file  RRProtocolRotamerTrials.cc
 
file  RRProtocolRotamerTrials.fwd.hh
 Preform the rotamer recovery test by determining the lowest energy (discrete) rotamer for each residue in a fixed context.
 
file  RRProtocolRotamerTrials.hh
 
file  RRProtocolRTMin.cc
 
file  RRProtocolRTMin.fwd.hh
 Preform the rotamer recovery test by minimizing each residue in a fixed context.
 
file  RRProtocolRTMin.hh
 
file  RRReporter.cc
 
file  RRReporter.fwd.hh
 
file  RRReporter.hh
 
file  RRReporterHuman.cc
 
file  RRReporterHuman.fwd.hh
 Report how well rosetta is a recovering the conformation of an experimentally validated structure in a human readable format.
 
file  RRReporterHuman.hh
 
file  RRReporterSQLite.cc
 
file  RRReporterSQLite.fwd.hh
 Report Rotamer Recovery to an SQLite database.
 
file  RRReporterSQLite.hh