Rosetta 3.5
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chemical Directory Reference
Directory dependency graph for chemical:
src/core/chemical

Directories

directory  carbohydrates
 
directory  orbitals
 
directory  rna
 
directory  sdf
 

Files

file  AA.cc
 translation between amino acid enum and string name/one letter char codes
 
file  AA.hh
 
file  Adduct.cc
 definition of residue adduct class
 
file  Adduct.fwd.hh
 declaration of class for adducts on residues
 
file  Adduct.hh
 declaration of implementation class for residue adducts
 
file  adduct_util.cc
 
file  adduct_util.hh
 
file  Atom.cc
 
file  Atom.fwd.hh
 
file  Atom.hh
 
file  AtomICoor.cc
 declaration of implementation class for abstract class Residue
 
file  AtomICoor.fwd.hh
 declaration of implementation class for abstract class Residue
 
file  AtomICoor.hh
 declaration of implementation class for abstract class Residue
 
file  AtomType.cc
 
file  AtomType.fwd.hh
 
file  AtomType.hh
 
file  AtomTypeDatabaseIO.cc
 Write chemical information associated with atom types to a database.
 
file  AtomTypeDatabaseIO.fwd.hh
 
file  AtomTypeDatabaseIO.hh
 
file  AtomTypeSet.cc
 
file  AtomTypeSet.fwd.hh
 
file  AtomTypeSet.hh
 
file  automorphism.cc
 
file  automorphism.hh
 
file  ChemicalManager.cc
 Chemical manager class.
 
file  ChemicalManager.fwd.hh
 
file  ChemicalManager.hh
 Chemical manager class header.
 
file  CSDAtomType.hh
 
file  CSDAtomTypeSet.cc
 
file  CSDAtomTypeSet.fwd.hh
 
file  CSDAtomTypeSet.hh
 
file  Element.cc
 Element class.
 
file  Element.fwd.hh
 
file  Element.hh
 Molecular mechanics atom type class.
 
file  ElementSet.cc
 
file  ElementSet.fwd.hh
 
file  ElementSet.hh
 
file  IdealBondLengthSet.cc
 
file  IdealBondLengthSet.fwd.hh
 
file  IdealBondLengthSet.hh
 
file  MMAtomType.cc
 Molecular mechanics atom type class.
 
file  MMAtomType.fwd.hh
 
file  MMAtomType.hh
 Molecular mechanics atom type class.
 
file  MMAtomTypeSet.cc
 
file  MMAtomTypeSet.fwd.hh
 
file  MMAtomTypeSet.hh
 
file  Orbital.cc
 
file  Orbital.fwd.hh
 
file  Orbital.hh
 
file  Patch.cc
 
file  Patch.fwd.hh
 
file  Patch.hh
 
file  PatchOperation.cc
 
file  PatchOperation.fwd.hh
 
file  PatchOperation.hh
 
file  ResConnID.cc
 
file  ResConnID.fwd.hh
 
file  ResConnID.hh
 
file  residue_io.cc
 
file  residue_io.hh
 
file  ResidueConnection.cc
 
file  ResidueConnection.fwd.hh
 declaration of implementation class for abstract class Residue
 
file  ResidueConnection.hh
 Inter-residue chemical bond connection point class declaration.
 
file  ResidueDatabaseIO.cc
 
file  ResidueDatabaseIO.fwd.hh
 
file  ResidueDatabaseIO.hh
 
file  ResidueLoader.cc
 
file  ResidueLoader.fwd.hh
 implementation of the Residue Loader
 
file  ResidueLoader.hh
 
file  ResidueLoaderCreator.hh
 
file  ResidueLoaderOptions.cc
 forward headers for the Residue Loader Options
 
file  ResidueLoaderOptions.fwd.hh
 forward headers for the Residue Loader Options
 
file  ResidueLoaderOptions.hh
 forward headers for the Residue Loader Options
 
file  ResidueLoaderOptionsCreator.hh
 
file  ResidueSelector.cc
 
file  ResidueSelector.fwd.hh
 
file  ResidueSelector.hh
 
file  ResidueSupport.cc
 
file  ResidueSupport.hh
 support functions for class residue; functions that should not be included as part of the class.
 
file  ResidueType.cc
 A class for defining a type of residue.
 
file  ResidueType.fwd.hh
 declaration of implementation class for abstract class Residue
 
file  ResidueType.hh
 
file  ResidueTypeSet.cc
 ResidueTypeSet class.
 
file  ResidueTypeSet.fwd.hh
 
file  ResidueTypeSet.hh
 
file  types.hh
 
file  util.cc
 Utilities for modifying and utilizing Residues and other core::chemical classes.
 
file  util.hh
 Utilities for modifying and utilizing Residues and other core::chemical classes.
 
file  VariantType.cc
 VariantTypes are used by Patches.
 
file  VariantType.fwd.hh
 
file  VariantType.hh