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hybridization Directory Reference
Directory dependency graph for hybridization:
src/protocols/hybridization

Files

file  AllResiduesChanged.hh
 
file  CartesianHybridize.cc
 
file  CartesianHybridize.fwd.hh
 
file  CartesianHybridize.hh
 
file  CartesianSampler.cc
 
file  CartesianSampler.fwd.hh
 
file  CartesianSampler.hh
 
file  ChunkTrialMover.cc
 Wrapper for InsertChunkMover. It can take a random template and steal coordinates of all chunks or a random one.
 
file  ChunkTrialMover.fwd.hh
 
file  ChunkTrialMover.hh
 Wrapper for InsertChunkMover. It can take a random template and steal coordinates of all chunks or a random one.
 
file  DDomainParse.cc
 A reimplementation of DDomain domain parsing algorithm, Protein Sci.16,947–955 (2007)
 
file  DDomainParse.hh
 A reimplementation of DDomain domain parsing algorithm, Protein Sci.16,947–955 (2007)
 
file  DomainAssembly.cc
 Domain Assembly.
 
file  DomainAssembly.fwd.hh
 
file  DomainAssembly.hh
 
file  FoldTreeHybridize.cc
 Align a random jump to template.
 
file  FoldTreeHybridize.fwd.hh
 
file  FoldTreeHybridize.hh
 Align a random jump to template.
 
file  HybridizeFoldtreeDynamic.cc
 A mover to dynamically manipulate fold tree during the template hybridization sampling.
 
file  HybridizeFoldtreeDynamic.fwd.hh
 
file  HybridizeFoldtreeDynamic.hh
 
file  HybridizeProtocol.cc
 
file  HybridizeProtocol.fwd.hh
 
file  HybridizeProtocol.hh
 Add constraints to the current pose conformation.
 
file  HybridizeProtocolCreator.hh
 
file  InsertChunkMover.cc
 Align a random jump to template.
 
file  InsertChunkMover.hh
 Align a random jump to template.
 
file  TemplateHistory.cc
 
file  TemplateHistory.fwd.hh
 
file  TemplateHistory.hh
 
file  TMalign.hh
 A reimplementation of TM-align algorithm.
 
file  util.cc
 Align a random jump to template.
 
file  util.hh
 Align a random jump to template.
 
file  WeightedFragmentSmoothTrialMover.cc
 Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.
 
file  WeightedFragmentSmoothTrialMover.fwd.hh
 
file  WeightedFragmentSmoothTrialMover.hh
 Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.
 
file  WeightedFragmentTrialMover.cc
 Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.
 
file  WeightedFragmentTrialMover.fwd.hh
 
file  WeightedFragmentTrialMover.hh
 Fragment insertion and trial, each residue has a customized weight for the frequency of insertion.