Here is a list of all class members with links to the classes they belong to:
- x -
- x
: core::io::pdb::AtomInformation
, core::scoring::PQR
, core::scoring::packstat::Circle
, protocols::pockets::PCluster::Cxyz
, core::kinematics::tree::Atom_
, core::scoring::packing::Ball
, protocols::sic_dock::Rose
, core::scoring::packing::Ball
, core::sequence::Cell
, core::scoring::packstat::Event
, protocols::simple_filters::Quat
, core::sequence::Cell
, protocols::frag_picker::VallResidue
, protocols::swa::rna::Atom_Bin
, protocols::frag_picker::VallResidue
- X
: protocols::sic_dock::Rose
- x
: core::scoring::packstat::Point
, core::scoring::packstat::SimplePDB_Atom
, core::fragment::BBTorsionSRFD
- X
: protocols::sparta::CORdata
, protocols::frags::RMSVallData
- x()
: core::fragment::picking_old::vall::VallResidue
, protocols::pockets::NonPlaidFingerprint::float4
, core::fragment::picking_old::vall::VallResidue
, core::kinematics::tree::Atom
- x0()
: core::scoring::constraints::MinMultiHarmonicFunc
, core::scoring::constraints::SigmoidFunc
, core::scoring::constraints::SquareWell2Func
, core::scoring::constraints::SquareWellFunc
, core::scoring::constraints::TopOutFunc
, core::scoring::constraints::CircularHarmonicFunc
, core::scoring::constraints::FlatHarmonicFunc
, core::scoring::constraints::HarmonicFunc
, core::scoring::constraints::MinMultiHarmonicFunc
- x0_
: core::scoring::constraints::AmberPeriodicFunc
, core::scoring::constraints::CharmmPeriodicFunc
, core::scoring::constraints::CircularHarmonicFunc
, core::scoring::constraints::CircularPowerFunc
, core::scoring::constraints::FlatHarmonicFunc
, core::scoring::constraints::HarmonicFunc
, core::scoring::constraints::IdentityFunc
, core::scoring::constraints::KarplusFunc
, core::scoring::constraints::MinMultiHarmonicFunc
, core::scoring::constraints::PeriodicFunc
, core::scoring::constraints::SigmoidFunc
, core::scoring::constraints::SquareWell2Func
, core::scoring::constraints::SquareWellFunc
, core::scoring::constraints::TopOutFunc
- X_
: protocols::frags::RMSVallData
- x_
: core::fragment::picking_old::vall::VallResidue
, protocols::frag_picker::VallResidue
- X_all_
: protocols::scoring::methods::pcs::PCS_data
, protocols::scoring::methods::pcs2::PcsDataCenter
- x_center_
: protocols::scoring::methods::pcs::GridSearchIterator
, protocols::scoring::methods::pcs2::GridSearchIterator
- x_current_
: protocols::scoring::methods::pcs::GridSearchIterator
, protocols::scoring::methods::pcs2::GridSearchIterator
- x_increment_
: protocols::swa::RigidBodySampler
- x_max
: protocols::hotspot_hashing::RotationSearchPattern
, protocols::hotspot_hashing::CartesianSearchPattern
- x_max_
: protocols::swa::RigidBodySampler
- x_middle_
: core::scoring::constraints::LinearPenaltyFunction
- x_min
: protocols::hotspot_hashing::RotationSearchPattern
, protocols::hotspot_hashing::CartesianSearchPattern
- x_min_
: protocols::swa::RigidBodySampler
- x_range()
: core::scoring::constraints::SquareWell2Func
- x_range_
: core::scoring::constraints::SquareWell2Func
- X_RAY_DIFFRACTION
: core::io::pdb::HeaderInformation
- x_sampling
: protocols::hotspot_hashing::RotationSearchPattern
, protocols::hotspot_hashing::CartesianSearchPattern
- x_vec_
: protocols::scoring::methods::pcs2::GridSearchIteratorCA
- x_vector_
: protocols::scoring::methods::pcs::GridSearchIterator
, protocols::scoring::methods::pcs2::GridSearchIterator
- xa
: protocols::hybridization::TMalign
- xav_
: protocols::evaluation::PCA
- xbin_
: core::scoring::constraints::CircularGeneral1D_Func
- XC
: protocols::sic_dock::Rose
- xC_
: core::scoring::constraints::CircularSigmoidalFunc
- xcorn_
: protocols::pockets::PocketGrid
- XCR
: protocols::sic_dock::Rose
- xdim_
: protocols::pockets::PocketGrid
- Xdim_
: core::scoring::packstat::Octree2D
- XfoxmScore()
: protocols::sic_dock::XfoxmScore
- XH_cutoff_
: core::scoring::NeighborList
- XH_cutoff_wide_
: core::scoring::NeighborList
- xhi
: core::scoring::etable::ExtraQuadraticRepulsion
- xlab()
: core::sequence::DP_Matrix
- xlabels_
: core::sequence::DP_Matrix
- xlen
: protocols::hybridization::TMalign
- xlo
: core::scoring::etable::ExtraQuadraticRepulsion
- xmaxs_
: protocols::sasa_scores::PPoly
- xmin_
: core::scoring::constraints::CircularGeneral1D_Func
- xmins_
: protocols::sasa_scores::PPoly
- xnum_points()
: core::scoring::geometric_solvation::GridInfo
- xnum_points_
: core::scoring::geometric_solvation::GridInfo
- xorigin()
: core::scoring::geometric_solvation::GridInfo
- xorigin_
: core::scoring::geometric_solvation::GridInfo
- xref_
: protocols::evaluation::PCA
- xresno
: protocols::hybridization::TMalign
- xstep()
: core::scoring::geometric_solvation::GridInfo
- xstep_
: core::scoring::geometric_solvation::GridInfo
- xt
: protocols::hybridization::TMalign
- xtm
: protocols::hybridization::TMalign
- xval_end_ramp_
: protocols::moves::FastLinearFunc
- xval_start_ramp_
: protocols::moves::FastLinearFunc
- XX_cutoff_
: core::scoring::NeighborList
- XX_cutoff_wide_
: core::scoring::NeighborList
- xx_init()
: core::optimization::MinimizerOptions
- xx_init_
: core::optimization::MinimizerOptions
- xyz()
: core::conformation::Atom
, core::conformation::orbitals::OrbitalXYZCoords
, core::pose::Pose
, core::conformation::orbitals::OrbitalXYZCoords
, core::conformation::PointGraphVertexData
, core::scoring::hbonds::hbtrie::HBAtom
, core::conformation::Residue
, core::kinematics::AtomTree
, core::kinematics::tree::Atom
, core::conformation::PointGraphVertexData
, core::conformation::Atom
, core::chemical::ICoorAtomID
, core::kinematics::tree::Atom_
, core::chemical::ICoorAtomID
, core::io::pdb::ResidueInformation
, core::scoring::hbonds::hbtrie::HBAtom
, core::scoring::packing::Ball
, core::scoring::packstat::SimplePDB_Atom
, core::pose::MiniPose
, core::scoring::constraints::FourPointsFunc
, core::scoring::packstat::CavityBall
, core::scoring::packing::Ball
, core::pose::Pose
, core::conformation::Conformation
, core::kinematics::tree::Atom_
, core::conformation::Residue
, core::kinematics::tree::Atom
, core::scoring::packstat::Sphere
, protocols::qsar::scoring_grid::ChargeAtom
, core::chemical::ICoorAtomID
- xyz2index_in_cell()
: core::scoring::electron_density_atomwise::ElectronDensityAtomwise
- xyz_
: core::conformation::PointGraphVertexData
, core::scoring::packing::Ball
, core::scoring::hbonds::hbtrie::HBAtom
, core::scoring::packstat::CavityBall
, core::conformation::Atom
, protocols::frag_picker::DiversifyCrmsdByClustering
, core::conformation::orbitals::OrbitalXYZCoords
- xyz_bin_halfwidths_
: protocols::match::OccupiedSpaceHash
, protocols::match::VoxelSetIterator
- xyz_bin_widths_
: protocols::match::HitHasher
, protocols::match::VoxelSetIterator
, protocols::match::MatchCounter
, protocols::match::OccupiedSpaceHash
, protocols::match::HitNeighborFinder
- xyz_coords_need_updating_
: core::kinematics::AtomTree
- xyz_event_link_
: protocols::viewer::ConformationViewer
- XYZ_Func
: protocols::constraints_additional::SequenceCoupling1BDConstraint
, core::scoring::constraints::SequenceProfileConstraint
, protocols::constraints_additional::SequenceCouplingConstraint
- xyz_local_
: core::scoring::methods::WaterBuilder
- xyz_moved_
: core::conformation::Conformation
- xyz_obs_hub_
: core::conformation::Conformation
- xyz_target()
: core::scoring::constraints::LocalCoordinateConstraint
- xyz_target_
: core::scoring::constraints::CoordinateConstraint
, core::scoring::constraints::LocalCoordinateConstraint
- XYZEvent()
: core::conformation::signals::XYZEvent
, core::conformation::Conformation
, core::conformation::signals::XYZEvent
- xyzhash_
: protocols::sic_dock::CBScore
- xyzMatrix
: protocols::simple_moves::BBGaussianMover
, protocols::simple_moves::BBConRotMover
, protocols::simple_moves::symmetry::DetectSymmetry
- xyzStripeHashPose()
: protocols::sic_dock::xyzStripeHashPose
- xyzStripeHashPoseWithMeta()
: protocols::sic_dock::xyzStripeHashPoseWithMeta
- xyzVector
: protocols::simple_moves::symmetry::DetectSymmetry