Rosetta Core  2014.35
Classes | Namespaces | Functions | Variables
ScoreFunctionFactory.hh File Reference
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/scoring/symmetry/SymmetricScoreFunction.fwd.hh>
#include <utility/vector1.hh>
#include <string>


class  core::scoring::ScoreFunctionFactory
 a collection of functions making a single score_function More...


 A class for reading in the atom type properties.


core::scoring::ScoreFunctionOP core::scoring::get_score_function (bool const is_fullatom=true)
 A helper function which returns a scoring function owning pointer according to the user's command line parameters -score:weights and -score:patch By default it returns weights=standard and patch=score12 for fullatom, and weights=cen_std and patch="" for centroid. More...
core::scoring::ScoreFunctionOP core::scoring::get_score_function_legacy (std::string pre_talaris_2013_weight_set, std::string pre_talaris_2013_patch_file="")
 A helper function that either returns a ScoreFunctionOP created by get_score_function() or the one specified by the protocol which is activated by the -restore_pre_talaris_2013_behavior flag. The purpose of this function is to preserve legacy behavior for the sake of reproducibility and so that a record of the old behavior is still preserved in the code to ease the process of reverting the change to get_score_function if that were the wrong behavior. More...
std::string core::scoring::get_score_functionName (bool const is_fullatom=true)
 use the logic of get_score_function to get the name. The name format is <weights_tag>[_<patch_tag> ... ] More...


std::string const core::scoring::TALARIS_2013
std::string const core::scoring::PRE_TALARIS_2013_STANDARD_WTS
std::string const core::scoring::SCORE13
std::string const core::scoring::CENTROID_WTS
std::string const core::scoring::SOFT_REP_WTS
std::string const core::scoring::SOFT_REP_DESIGN_WTS
std::string const core::scoring::DNA_INT_WTS
std::string const core::scoring::DNA_INT_WTS_GB
std::string const core::scoring::MM_STD_WTS
std::string const core::scoring::RNA_LORES_WTS
std::string const core::scoring::RNA_HIRES_WTS
std::string const core::scoring::RNA_LORES_PLUS_HIRES_WTS
std::string const core::scoring::MEMB_HIGHRES_WTS
std::string const core::scoring::SCORE12_PATCH
std::string const core::scoring::DOCK_PATCH
std::string const core::scoring::DOCK_LOW_PATCH

Detailed Description

Andrew Leaver-Fay (