Rosetta Core  2014.35
Classes | Functions | Variables
core::init Namespace Reference

Classes

struct  pre_talaris_2013_behavior_settings
 

Functions

void init_mpi (int, char **)
 
void init_options (int argc, char *argv[])
 Initialize the option system, which manages command line options. More...
 
void init_tracers ()
 Tracers control output to std::cout and std::cerr. More...
 
void init_source_revision ()
 Choose to output source version control information? More...
 
void init_paths ()
 Setup basic search paths. More...
 
void check_deprecated_flags ()
 Check for deprecated flags specified by the user and output error messages if necessary. More...
 
void report_application_command (int argc, char *argv[])
 Describe the application execution command. More...
 
void init_random_number_generators ()
 Initalize random number generators. More...
 
void init_random_generators (int const start_seed, RND_RunType run_type, std::string const &RGtype)
 Initialize random generator systems (and send debug io to tracer with seed/mode info). More...
 
void random_delay ()
 Choose to randomly delay execution to desyncronize parallel execution. More...
 
void locate_rosetta_database ()
 Locate rosetta_database. More...
 
void init_profiling ()
 Profiling measures execution performance. More...
 
void init (int argc, char *argv[])
 Init basic core systems: options system, random system. More...
 
void init (utility::vector1< std::string > const &args)
 wrapper for core system Init More...
 
void init_mpi (int argc, char *argv[])
 Initialize MPI (message passing interface) for parallel applications. More...
 
void init_revert_to_pre_talaris_2013_mistake ()
 Initialize the "revert to before Talaris2013" mistake. More...
 
void revert_to_pre_talaris_2013_defaults ()
 Reset a set of flags to their pre-talaris behavior. More...
 
void init_hbond_sp2_correction ()
 Initialize the hbond Sp2 correction Deprecated as Talaris2013 becomes default. More...
 
void init_facts_correction ()
 Initialize the FACTS correction. More...
 
void init_correct_correction ()
 Initialize the -correct correction. More...
 
void init_crystal_refinement_correction ()
 Initialize the crystal refinement correction. More...
 
void init_beta_correction ()
 Initialize the -beta score function. More...
 
void init_nonideal_correction ()
 Initialize nonideal bond geometry correction. More...
 
void init_restore_score12prime ()
 restore the the score function to the Score12prime version More...
 
void init_score_function_corrections ()
 Initialize the latest and greatest score function parameters. More...
 
void check_score_function_sanity (std::string const &scorefxn_key, bool warn_only=false)
 Check if a score function is requested with incompatible option flags. More...
 

Variables

static EnergyMethodRegistrator
< scoring::constraints::ConstraintsEnergyCreator
ConstraintsEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::disulfides::CentroidDisulfideEnergyCreator
CentroidDisulfideEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::disulfides::DisulfideMatchingEnergyCreator
DisulfideMatchingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::disulfides::FullatomDisulfideEnergyCreator
FullatomDisulfideEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::etable::EtableEnergyCreator
EtableEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::hbonds::HBondEnergyCreator
HBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ChainbreakEnergyCreator
ChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenPairEnergyCreator
CenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ContactOrderEnergyCreator
ContactOrderEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::IntermolEnergyCreator
IntermolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MissingEnergyCreator
MissingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::EnvEnergyCreator
EnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::EnvSmoothEnergyCreator
EnvSmoothEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::OmegaTetherEnergyCreator
OmegaTetherEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::OtherPoseEnergyCreator
OtherPoseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::NMerRefEnergyCreator
NMerRefEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::NMerPSSMEnergyCreator
NMerPSSMEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::NMerSVMEnergyCreator
NMerSVMEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::P_AA_EnergyCreator
P_AA_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::P_AA_pp_EnergyCreator
P_AA_pp_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PackStatEnergyCreator
PackStatEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PairEnergyCreator
PairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PeptideBondEnergyCreator
PeptideBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ProClosureEnergyCreator
ProClosureEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::BurialEnergyCreator
BurialCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RG_Energy_FastCreator
RG_Energy_FastCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RG_LocalEnergyCreator
RG_LocalEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SA_EnergyCreator
SA_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::D2H_SA_EnergyCreator
D2H_SA_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ProQ_EnergyCreator
ProQ_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RMS_EnergyCreator
RMS_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::Rama2BOffsetEnergyCreator
Ramac2BOffsetEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RamachandranEnergy2BCreator
RamachandranEnergy2BCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::RamachandranEnergyCreator
RamachandranEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ReferenceEnergyCreator
ReferenceEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ReferenceEnergyNoncanonicalCreator
ReferenceEnergyNoncanonicalCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SecondaryStructureEnergyCreator
SecondaryStructureEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::dfire::DFIRE_EnergyCreator
DFIRE_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::vdwaals::VDW_EnergyCreator
VDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::GoapEnergyCreator
GoapEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::dunbrack::DunbrackEnergyCreator
DunbrackEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::dunbrack::cenrot::CenRotDunEnergyCreator
CenRotDunEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::nv::NVscoreCreator
NVscoreCreator_registrator
 
static EnergyMethodRegistrator
< scoring::orbitals::OrbitalsScoreCreator
OrbitalsScoreCreator_registrator
 
static EnergyMethodRegistrator
< scoring::interface_::DDPscoreCreator
DDPscoreCreator_registrator
 
static EnergyMethodRegistrator
< scoring::carbon_hbonds::CarbonHBondEnergyCreator
CarbonHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::custom_pair_distance::FullatomCustomPairDistanceEnergyCreator
FullatomCustomPairDistanceEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CustomAtomPairEnergyCreator
CustomAtomPairEnergy_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::FastDensEnergyCreator
FastDensEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::ElecDensCenEnergyCreator
ElecDensCenEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::ElecDensAllAtomCenEnergyCreator
ElecDensAllAtomCenEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::ElecDensEnergyCreator
ElecDensEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density::PattersonCorrEnergyCreator
PattersonCorrEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::cryst::XtalMLEnergyCreator
XtalMLEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::electron_density_atomwise::ElecDensAtomwiseEnergyCreator
ElecDensAtomwiseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::ExactOccludedHbondSolEnergyCreator
ExactOccludedHbondSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::ContextDependentGeometricSolEnergyCreator
ContextDependentGeometricSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::ContextIndependentGeometricSolEnergyCreator
ContextIndependentGeometricSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::OccludedHbondSolEnergyCreator
OccludedHbondSolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::geometric_solvation::OccludedHbondSolEnergy_onebodyCreator
OccludedHbondSolEnergy_onebodyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::FA_ElecEnergyCreator
FA_ElecEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::RNA_FA_ElecEnergyCreator
RNA_FA_ElecEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::FA_ElecEnergyAroAroCreator
FA_ElecEnergyAroAroCreator_registrator
 
static EnergyMethodRegistrator
< scoring::elec::FA_ElecEnergyAroAllCreator
FA_ElecEnergyAroAllCreator_registrator
 
static EnergyMethodRegistrator
< scoring::hackaro::HackAroEnergyCreator
HackAroEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::dna::DNAChiEnergyCreator
DNAChiEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::dna::DNATorsionEnergyCreator
DNATorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::loop_graph::LoopCloseEnergyCreator
LoopCloseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DNA_BaseEnergyCreator
DNA_BaseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DirectReadoutEnergyCreator
DirectReadoutEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DistanceChainbreakEnergyCreator
DistanceChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::Fa_MbenvEnergyCreator
Fa_MbenvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::Fa_MbsolvEnergyCreator
Fa_MbsolvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::FreeMoietyEnergyCreator
FreeMoietyEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::GenBornEnergyCreator
GenBornEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::FACTSEnergyCreator
FACTSEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::HybridVDW_EnergyCreator
HybridVDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LK_PolarNonPolarEnergyCreator
LK_PolarNonPolarEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LK_hackCreator
LK_hackCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LK_BallEnergyCreator
LK_BallEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::LinearChainbreakEnergyCreator
LinearChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMBondAngleEnergyCreator
MMBondAngleEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CartesianBondedEnergyCreator
CartesianBondedEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMBondLengthEnergyCreator
MMBondLengthEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMTorsionEnergyCreator
MMTorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMLJEnergyInterCreator
MMLJEnergyInterCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MMLJEnergyIntraCreator
MMLJEnergyIntraCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneCbetaEnergyCreator
MembraneCbetaEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneCenPairEnergyCreator
MembraneCenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneEnvEnergyCreator
MembraneEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneEnvPenaltiesCreator
MembraneEnvPenaltiesCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPPairEnergyCreator
MPPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPEnvEnergyCreator
MPEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPCbetaEnergyCreator
MPCbetaEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPNonHelixPenaltyCreator
MPNonHelixPenaltyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPTerminiPenaltyCreator
MPTerminiPenaltyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::MPTMProjPenaltyCreator
MPTMProjPenaltyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::FaMPEnvEnergyCreator
FaMPEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::FaMPSolvEnergyCreator
FaMPSolvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::membrane::FaMPEnvSmoothEnergyCreator
FaMPEnvSMoothEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SmoothCenPairEnergyCreator
SmoothCenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SmoothEnvEnergyCreator
SmoothEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenRotPairEnergyCreator
CenRotPairEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenRotEnvEnergyCreator
CenRotEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::CenHBEnergyCreator
CenHBEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneLipoCreator
MembraneLipoCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::MembraneEnvSmoothEnergyCreator
MembraneEnvSmoothEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::pHEnergyCreator
pHEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ChemicalShiftAnisotropyEnergyCreator
ChemicalShiftAnisotropyEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::DipolarCouplingEnergyCreator
DipolarCouplingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ResidualDipolarCouplingEnergyCreator
ResidualDipolarCouplingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::ResidualDipolarCouplingEnergy_RohlCreator
ResidualDipolarCouplingEnergy_RohlCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SuckerEnergyCreator
SuckerEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::GaussianOverlapEnergyCreator
GaussianOverlapEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::YHHPlanarityEnergyCreator
YYHPlanarityEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::interaction_graph::SurfaceEnergyCreator
SurfaceEnergyCreator_registrator
 
static EnergyMethodRegistrator
< pack::interaction_graph::HPatchEnergyCreator
HPatchEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::SymmetricLigandEnergyCreator
SymmetricLigandEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::UnfoldedStateEnergyCreator
UnfoldedStateEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::WaterAdductHBondEnergyCreator
WaterAdductHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::WaterAdductIntraEnergyCreator
WaterAdductIntraEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::packing::HolesEnergyCreator
HolesEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::packing::SurfVolEnergyCreator
SurfVolEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::packing::SurfEnergyCreator
SurfEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RG_Energy_RNACreator
RG_Energy_RNACreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_BulgeEnergyCreator
RNA_BulgeEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::data::RNA_ChemicalMappingEnergyCreator
RNA_ChemicalMappingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::data::RNA_DataBackboneEnergyCreator
RNA_DataBackboneEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_FullAtomStackingEnergyCreator
RNA_FullAtomStackingEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_JR_SuiteEnergyCreator
RNA_JR_SuiteEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_LJ_BaseEnergyCreator
RNA_LJ_BaseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_PairwiseLowResolutionEnergyCreator
RNA_PairwiseLowResolutionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_SugarCloseEnergyCreator
RNA_SugarCloseEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_SuiteEnergyCreator
RNA_SuiteEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_TorsionEnergyCreator
RNA_TorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_VDW_EnergyCreator
RNA_VDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_Mg_EnergyCreator
RNA_Mg_EnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::RNA_FullAtomVDW_BasePhosphateCreator
RNA_FullAtomVDW_BasePhosphateCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::StackElecEnergyCreator
StackElecEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::rna::chemical_shift::RNA_ChemicalShiftEnergyCreator
NA_ChemicalShiftEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::sym_e::symECreator
symECreator_registrator
 
static EnergyMethodRegistrator
< scoring::methods::PoissonBoltzmannEnergyCreator
PoissonBoltzmannEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::FastSAXSEnergyCreator
FastSAXSEnergyCreator_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::SAXSEnergyCreatorCEN
SAXSEnergyCreatorCEN_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::SAXSEnergyCreatorFA
SAXSEnergyCreatorFA_registrator
 
static EnergyMethodRegistrator
< scoring::saxs::SAXSEnergyCreator
SAXSEnergyCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AmbiguousConstraintCreator
AmbiguousConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AmbiguousNMRConstraintCreator
AmbiguousNMRConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AmbiguousNMRDistanceConstraintCreator
AmbiguousNMRDistanceConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AngleConstraintCreator
AngleConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::AtomPairConstraintCreator
AtomPairConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::BigBinConstraintCreator
BigBinConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::CoordinateConstraintCreator
CoordinateConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::DihedralConstraintCreator
DihedralConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::DihedralPairConstraintCreator
DihedralPairConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::KofNConstraintCreator
KofNConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::LocalCoordinateConstraintCreator
LocalCoordinateConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::MultiConstraintCreator
MultiConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::FabConstraintCreator
FabConstraintCreator_registrator
 
static ConstraintRegistrator
< core::pack::dunbrack::DunbrackConstraintCreator
DunbrackConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::SiteConstraintCreator
SiteConstraintCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::SiteConstraintResiduesCreator
SiteConstraintResiduesCreator_registrator
 
static ConstraintRegistrator
< core::scoring::constraints::SequenceProfileConstraintCreator
SequenceProfileConstraintCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ProteinSilentStructCreator
ProteinSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ProteinSilentStruct_SinglePrecCreator
ProteinSilentStruct_SinglePrecCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::RNA_SilentStructCreator
RNA_SilentStructCreator_registrator
 
static SilentStructRegistrator
< core::import_pose::PDBSilentStructCreator
PDBSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::BinarySilentStructCreator
BinarySilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ScoreFileSilentStructCreator
ScoreFileSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::ScoreJumpFileSilentStructCreator
ScoreJumpFileSilentStructCreator_registrator
 
static SilentStructRegistrator
< core::io::silent::RigidBodySilentStructCreator
RigidBodySilentStructCreator_registrator
 
static SequenceRegistrator
< core::sequence::SimpleSequenceCreator
SimpleSequenceCreator_registrator
 
static SequenceRegistrator
< core::sequence::SequenceProfileCreator
SequenceProfileCreator_registrator
 
static SequenceRegistrator
< core::sequence::SequenceCouplingCreator
SequenceCouplingCreator_registrator
 
static SequenceRegistrator
< core::sequence::CompositeSequenceCreator
CompositeSequenceCreator_registrator
 
static
TaskOperationRegistrator
< RestrictYSDesignCreator
RestrictYSDesignCreator_registrator
 
static
TaskOperationRegistrator
< PreventRepackingCreator
PreventRepackingCreator_registrator
 
static
TaskOperationRegistrator
< PreserveCBetaCreator
PreserveCBetaCreator_registrator
 
static
TaskOperationRegistrator
< AppendRotamerSetCreator
AppendRotamerSetCreator_registrator
 
static
TaskOperationRegistrator
< AppendRotamerCreator
AppendRotamerCreator_registrator
 
static
TaskOperationRegistrator
< ExtraRotamersCreator
ExtraRotamersCreator_registrator
 
static
TaskOperationRegistrator
< ExtraChiCutoffCreator
ExtraChiCutoffCreator_registrator
 
static
TaskOperationRegistrator
< SetRotamerCouplingsCreator
SetRotamerCouplingsCreator_registrator
 
static
TaskOperationRegistrator
< SetRotamerLinksCreator
SetRotamerLinksCreator_registrator
 
static
TaskOperationRegistrator
< ReadResfileCreator
ReadResfileCreator_registrator
 
static
TaskOperationRegistrator
< ReadResfileAndObeyLengthEventsCreator
ReadResfileAndObeyLengthEventsCreator_registrator
 
static
TaskOperationRegistrator
< IncludeCurrentCreator
IncludeCurrentCreator_registrator
 
static
TaskOperationRegistrator
< InitializeExtraRotsFromCommandlineCreator
InitializeExtraRotsFromCommandlineCreator_registrator
 
static
TaskOperationRegistrator
< InitializeFromCommandlineCreator
InitializeFromCommandlineCreator_registrator
 
static
TaskOperationRegistrator
< ExtraRotamersGenericCreator
ExtraRotamersGenericCreator_registrator
 
static
TaskOperationRegistrator
< RotamerExplosionCreator
RotamerExplosionCreator_registrator
 
static
TaskOperationRegistrator
< RestrictAbsentCanonicalAASCreator
RestrictAbsentCanonicalAASCreator_registrator
 
static
TaskOperationRegistrator
< DisallowIfNonnativeCreator
DisallowIfNonnativeCreator_registrator
 
static
TaskOperationRegistrator
< RestrictResidueToRepackingCreator
RestrictResidueToRepackingCreator_registrator
 
static
TaskOperationRegistrator
< RestrictToRepackingCreator
RestrictToRepackingCreator_registrator
 
static
TaskOperationRegistrator
< OperateOnCertainResiduesCreator
OperateOnCertainResiduesCreator_registrator
 
static
TaskOperationRegistrator
< OperateOnResidueSubsetCreator
OperateOnResidueSubsetCreator_registrator
 
static
TaskOperationRegistrator
< NoRepackDisulfidesCreator
NoRepackDisulfidesCreator_registrator
 
static
TaskOperationRegistrator
< ReplicateTaskCreator
ReplicateTaskCreator_registrator
 
static
TaskOperationRegistrator
< OptCysHGCreator
OptCysHGCreator_registrator
 
static
TaskOperationRegistrator
< OptHCreator
OptHCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< RestrictToRepackingRLTCreator
RestrictToRepackingRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< RestrictAbsentCanonicalAASRLTCreator
RestrictAbsentCanonicalAASRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< DisallowIfNonnativeRLTCreator
DisallowIfNonnativeRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< PreventRepackingRLTCreator
PreventRepackingRLTCreator_registrator
 
static
ResLvlTaskOperationRegistrator
< AddBehaviorRLTCreator
AddBehaviorRLTCreator_registrator
 
static ResFilterRegistrator
< ResidueHasPropertyCreator
ResidueHasPropertyCreator_registrator
 
static ResFilterRegistrator
< ResiduePDBInfoHasLabelCreator
ResiduePDBInfoHasLabelCreator_registrator
 
static ResFilterRegistrator
< ResidueLacksPropertyCreator
ResidueLacksPropertyCreator_registrator
 
static ResFilterRegistrator
< ResidueName3IsCreator
ResidueName3IsCreator_registrator
 
static ResFilterRegistrator
< ResidueName3IsntCreator
ResidueName3IsntCreator_registrator
 
static ResFilterRegistrator
< ResidueIndexIsCreator
ResidueIndexIsCreator_registrator
 
static ResFilterRegistrator
< ResidueIndexIsntCreator
ResidueIndexIsntCreator_registrator
 
static ResFilterRegistrator
< ResiduePDBIndexIsCreator
ResiduePDBIndexIsCreator_registrator
 
static ResFilterRegistrator
< ResiduePDBIndexIsntCreator
ResiduePDBIndexIsntCreator_registrator
 
static ResFilterRegistrator
< ChainIsCreator
ChainIsCreator_registrator
 
static ResFilterRegistrator
< ChainIsntCreator
ChainIsntCreator_registrator
 
static ResFilterRegistrator
< AnyResFilterCreator
AnyResFilterCreator_registrator
 
static ResFilterRegistrator
< AllResFilterCreator
AllResFilterCreator_registrator
 
static ResFilterRegistrator
< NoResFilterCreator
NoResFilterCreator_registrator
 
static ResFilterRegistrator
< ResidueTypeFilterCreator
ResidueTypeResFilterCreator_registrator
 
static
ResidueSelectorRegistrator
< AndResidueSelectorCreator
reg_AndResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< ChainSelectorCreator
reg_ChainSelectorCreator
 
static
ResidueSelectorRegistrator
< InterGroupInterfaceByVectorSelectorCreator
reg_InterGroupInterfaceByVectorSelectorCreator
 
static
ResidueSelectorRegistrator
< JumpDownstreamSelectorCreator
reg_JumpDownstreamSelectorCreator
 
static
ResidueSelectorRegistrator
< JumpUpstreamSelectorCreator
reg_JumpUpstreamSelectorCreator
 
static
ResidueSelectorRegistrator
< NeighborhoodResidueSelectorCreator
reg_NeighborhoodResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< NotResidueSelectorCreator
reg_NotResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< NumNeighborsSelectorCreator
reg_NumNeighborsSelectorCreator
 
static
ResidueSelectorRegistrator
< OrResidueSelectorCreator
reg_OrResidueSelectorCreator
 
static
ResidueSelectorRegistrator
< ResidueIndexSelectorCreator
reg_ResidueIndexSelectorCreator
 
static
ResourceLoaderRegistrator
< core::conformation::symmetry::SymmDataLoaderCreator
SymmDataLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::io::silent::SilentFileLoaderCreator
SilentFileLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::import_pose::PoseFromPDBLoaderCreator
PoseFromPDBLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::scoring::electron_density::ElectronDensityLoaderCreator
ElectronDensityLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::chemical::ResidueLoaderCreator
ResidueLoaderCreator_registrator
 
static
ResourceLoaderRegistrator
< core::membrane::io::LipoFileLoaderCreator
LipOFileLoaderCreator_registrator
 
static
ResourceOptionsRegistrator
< core::conformation::symmetry::SymmDataOptionsCreator
SymmDataOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::import_pose::ImportPoseOptionsCreator
ImportPoseOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::io::silent::SilentFileOptionsCreator
SilentFileOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::scoring::electron_density::ElectronDensityOptionsCreator
ElectronDensityOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::chemical::ResidueLoaderOptionsCreator
ResiudeLoaderOptionsCreator_registrator
 
static
ResourceOptionsRegistrator
< core::membrane::io::LipoFileOptionsCreator
LipoFileLoaderCreator_registrator
 
static basic::Tracer TR ("core.init")
 
pre_talaris_2013_behavior_settings
const 
restore_sc12_settings
 
static basic::Tracer TR ("core.init.score_function_corrections")
 

Function Documentation

void core::init::check_deprecated_flags ( )

Check for deprecated flags specified by the user and output error messages if necessary.

Check for deprecated flags and utility exit if any deprecated flags are detected.

If you deprecate a long standing flag, add a line to this function to describe what the deprecated flag has been replaced with. If the user specifies one of these flags, Rosetta will utility exit with a helpful message directing the user towards the new functionality

References LoopModel::input_pdb, option, TR, and user.

Referenced by init().

void core::init::check_score_function_sanity ( std::string const &  scorefxn_key,
bool  only_warn 
)

Check if a score function is requested with incompatible option flags.

References option, mistakes::restore_pre_talaris_2013_behavior, and TR.

void core::init::init ( int  argc,
char *  argv[] 
)
void core::init::init ( utility::vector1< std::string > const &  args)

wrapper for core system Init

References init(), and core::io::serialization::size().

void core::init::init_beta_correction ( )

Initialize the -beta score function.

References corrections::beta, score::bonded_params_dir, optimization::nonideal, option, user, and score::weights.

Referenced by init_score_function_corrections().

void core::init::init_correct_correction ( )
void core::init::init_crystal_refinement_correction ( )
void core::init::init_facts_correction ( )
void core::init::init_hbond_sp2_correction ( )
void core::init::init_mpi ( int  argc,
char *  argv[] 
)

Initialize MPI (message passing interface) for parallel applications.

void core::init::init_mpi ( int  ,
char **   
)

Referenced by init().

void core::init::init_nonideal_correction ( )
void core::init::init_options ( int  argc,
char *  argv[] 
)
void core::init::init_paths ( )

Setup basic search paths.

References option, in::path::path, utility::io::izstream::set_alternative_search_paths(), and user.

Referenced by init().

void core::init::init_profiling ( )

Profiling measures execution performance.

References basic::prof_reset().

Referenced by init().

void core::init::init_random_generators ( int const  start_seed,
RND_RunType  run_type,
std::string const &  RGtype 
)

Initialize random generator systems (and send debug io to tracer with seed/mode info).

References _RND_TestRun_, and numeric::random::RandomGenerator::initializeRandomGenerators().

Referenced by init_random_number_generators().

void core::init::init_random_number_generators ( )
void core::init::init_restore_score12prime ( )

restore the the score function to the Score12prime version

References option, score::patch, revert_to_pre_talaris_2013_defaults(), corrections::score::score12prime, and score::weights.

void core::init::init_revert_to_pre_talaris_2013_mistake ( )

Initialize the "revert to before Talaris2013" mistake.

References option, mistakes::restore_pre_talaris_2013_behavior, and revert_to_pre_talaris_2013_defaults().

Referenced by init_score_function_corrections().

void core::init::init_score_function_corrections ( )
void core::init::init_source_revision ( )

Choose to output source version control information?

References core::minirosetta_svn_url(), core::minirosetta_svn_version(), option, TR, and run::version.

Referenced by init().

void core::init::init_tracers ( )
void core::init::locate_rosetta_database ( )

Locate rosetta_database.

References in::path::database, option, path, TR, and user.

Referenced by init().

void core::init::random_delay ( )

Choose to randomly delay execution to desyncronize parallel execution.

References run::delay, run::nodelay, option, run::random_delay, utility::sys_sleep(), TR, and numeric::random::uniform().

Referenced by init().

void core::init::report_application_command ( int  argc,
char *  argv[] 
)

Describe the application execution command.

References TR.

Referenced by init().

void core::init::revert_to_pre_talaris_2013_defaults ( )

Reset a set of flags to their pre-talaris behavior.

References score::analytic_etable_evaluation, core::init::pre_talaris_2013_behavior_settings::analytic_etable_evaluation, corrections::score::dun10, core::init::pre_talaris_2013_behavior_settings::dun10, score::elec_min_dis, core::init::pre_talaris_2013_behavior_settings::elec_min_dis, corrections::chemical::expand_st_chi2sampling, core::init::pre_talaris_2013_behavior_settings::expand_st_chi2sampling, corrections::score::hb_fade_energy, core::init::pre_talaris_2013_behavior_settings::hb_fade_energy, corrections::score::hb_sp2_chipen, core::init::pre_talaris_2013_behavior_settings::hb_sp2_chipen, corrections::score::hb_sp2_outer_width, core::init::pre_talaris_2013_behavior_settings::hb_sp2_outer_width, corrections::score::hbond_measure_sp3acc_BAH_from_hvy, core::init::pre_talaris_2013_behavior_settings::hbond_measure_sp3acc_BAH_from_hvy, score::hbond_params, core::init::pre_talaris_2013_behavior_settings::hbond_params, corrections::score::lj_hbond_hdis, core::init::pre_talaris_2013_behavior_settings::lj_hbond_hdis, corrections::score::lj_hbond_OH_donor_dis, core::init::pre_talaris_2013_behavior_settings::lj_hbond_OH_donor_dis, ddg::min_cst_weights, option, score::pack_weights, params, score::patch, mistakes::chemical::pre_talaris2013_geometries, core::init::pre_talaris_2013_behavior_settings::pre_talaris2013_geometries, restore_sc12_settings, core::init::pre_talaris_2013_behavior_settings::score_patch, core::init::pre_talaris_2013_behavior_settings::score_weights, basic::options::OptionKeys::chemical::set_atom_properties, score::smooth_fa_elec, core::init::pre_talaris_2013_behavior_settings::smooth_fa_elec, corrections::score::use_bicubic_interpolation, core::init::pre_talaris_2013_behavior_settings::use_bicubic_interpolation, user, score::weights, and qsar::weights.

Referenced by init_restore_score12prime(), and init_revert_to_pre_talaris_2013_mistake().

Variable Documentation

ResLvlTaskOperationRegistrator< AddBehaviorRLTCreator > core::init::AddBehaviorRLTCreator_registrator
static
ResFilterRegistrator< AllResFilterCreator > core::init::AllResFilterCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::AmbiguousConstraintCreator > core::init::AmbiguousConstraintCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::AmbiguousNMRConstraintCreator > core::init::AmbiguousNMRConstraintCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::AmbiguousNMRDistanceConstraintCreator > core::init::AmbiguousNMRDistanceConstraintCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::AngleConstraintCreator > core::init::AngleConstraintCreator_registrator
static
ResFilterRegistrator< AnyResFilterCreator > core::init::AnyResFilterCreator_registrator
static
TaskOperationRegistrator< AppendRotamerCreator > core::init::AppendRotamerCreator_registrator
static
TaskOperationRegistrator< AppendRotamerSetCreator > core::init::AppendRotamerSetCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::AtomPairConstraintCreator > core::init::AtomPairConstraintCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::BigBinConstraintCreator > core::init::BigBinConstraintCreator_registrator
static
SilentStructRegistrator< core::io::silent::BinarySilentStructCreator > core::init::BinarySilentStructCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::BurialEnergyCreator > core::init::BurialCreator_registrator
static
EnergyMethodRegistrator< scoring::carbon_hbonds::CarbonHBondEnergyCreator > core::init::CarbonHBondEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::CartesianBondedEnergyCreator > core::init::CartesianBondedEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::CenHBEnergyCreator > core::init::CenHBEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::CenPairEnergyCreator > core::init::CenPairEnergyCreator_registrator
static
EnergyMethodRegistrator< pack::dunbrack::cenrot::CenRotDunEnergyCreator > core::init::CenRotDunEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::CenRotEnvEnergyCreator > core::init::CenRotEnvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::CenRotPairEnergyCreator > core::init::CenRotPairEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::disulfides::CentroidDisulfideEnergyCreator > core::init::CentroidDisulfideEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ChainbreakEnergyCreator > core::init::ChainbreakEnergyCreator_registrator
static
ResFilterRegistrator< ChainIsCreator > core::init::ChainIsCreator_registrator
static
ResFilterRegistrator< ChainIsntCreator > core::init::ChainIsntCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ChemicalShiftAnisotropyEnergyCreator > core::init::ChemicalShiftAnisotropyEnergyCreator_registrator
static
SequenceRegistrator< core::sequence::CompositeSequenceCreator > core::init::CompositeSequenceCreator_registrator
static
EnergyMethodRegistrator< scoring::constraints::ConstraintsEnergyCreator > core::init::ConstraintsEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ContactOrderEnergyCreator > core::init::ContactOrderEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::geometric_solvation::ContextDependentGeometricSolEnergyCreator > core::init::ContextDependentGeometricSolEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::geometric_solvation::ContextIndependentGeometricSolEnergyCreator > core::init::ContextIndependentGeometricSolEnergyCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::CoordinateConstraintCreator > core::init::CoordinateConstraintCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::CustomAtomPairEnergyCreator > core::init::CustomAtomPairEnergy_registrator
static
EnergyMethodRegistrator< scoring::methods::D2H_SA_EnergyCreator > core::init::D2H_SA_EnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::interface_::DDPscoreCreator > core::init::DDPscoreCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::dfire::DFIRE_EnergyCreator > core::init::DFIRE_EnergyCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::DihedralConstraintCreator > core::init::DihedralConstraintCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::DihedralPairConstraintCreator > core::init::DihedralPairConstraintCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::DipolarCouplingEnergyCreator > core::init::DipolarCouplingEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::DirectReadoutEnergyCreator > core::init::DirectReadoutEnergyCreator_registrator
static
TaskOperationRegistrator< DisallowIfNonnativeCreator > core::init::DisallowIfNonnativeCreator_registrator
static
ResLvlTaskOperationRegistrator< DisallowIfNonnativeRLTCreator > core::init::DisallowIfNonnativeRLTCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::DistanceChainbreakEnergyCreator > core::init::DistanceChainbreakEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::disulfides::DisulfideMatchingEnergyCreator > core::init::DisulfideMatchingEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::DNA_BaseEnergyCreator > core::init::DNA_BaseEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::dna::DNAChiEnergyCreator > core::init::DNAChiEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::dna::DNATorsionEnergyCreator > core::init::DNATorsionEnergyCreator_registrator
static
ConstraintRegistrator< core::pack::dunbrack::DunbrackConstraintCreator > core::init::DunbrackConstraintCreator_registrator
static
EnergyMethodRegistrator< pack::dunbrack::DunbrackEnergyCreator > core::init::DunbrackEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::electron_density::ElecDensAllAtomCenEnergyCreator > core::init::ElecDensAllAtomCenEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::electron_density_atomwise::ElecDensAtomwiseEnergyCreator > core::init::ElecDensAtomwiseEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::electron_density::ElecDensCenEnergyCreator > core::init::ElecDensCenEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::electron_density::ElecDensEnergyCreator > core::init::ElecDensEnergyCreator_registrator
static
ResourceLoaderRegistrator< core::scoring::electron_density::ElectronDensityLoaderCreator > core::init::ElectronDensityLoaderCreator_registrator
static
ResourceOptionsRegistrator< core::scoring::electron_density::ElectronDensityOptionsCreator > core::init::ElectronDensityOptionsCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::EnvEnergyCreator > core::init::EnvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::EnvSmoothEnergyCreator > core::init::EnvSmoothEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::etable::EtableEnergyCreator > core::init::EtableEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::geometric_solvation::ExactOccludedHbondSolEnergyCreator > core::init::ExactOccludedHbondSolEnergyCreator_registrator
static
TaskOperationRegistrator< ExtraChiCutoffCreator > core::init::ExtraChiCutoffCreator_registrator
static
TaskOperationRegistrator< ExtraRotamersCreator > core::init::ExtraRotamersCreator_registrator
static
TaskOperationRegistrator< ExtraRotamersGenericCreator > core::init::ExtraRotamersGenericCreator_registrator
static
EnergyMethodRegistrator< scoring::elec::FA_ElecEnergyAroAllCreator > core::init::FA_ElecEnergyAroAllCreator_registrator
static
EnergyMethodRegistrator< scoring::elec::FA_ElecEnergyAroAroCreator > core::init::FA_ElecEnergyAroAroCreator_registrator
static
EnergyMethodRegistrator< scoring::elec::FA_ElecEnergyCreator > core::init::FA_ElecEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::Fa_MbenvEnergyCreator > core::init::Fa_MbenvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::Fa_MbsolvEnergyCreator > core::init::Fa_MbsolvEnergyCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::FabConstraintCreator > core::init::FabConstraintCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::FACTSEnergyCreator > core::init::FACTSEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::FaMPEnvEnergyCreator > core::init::FaMPEnvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::FaMPEnvSmoothEnergyCreator > core::init::FaMPEnvSMoothEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::FaMPSolvEnergyCreator > core::init::FaMPSolvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::electron_density::FastDensEnergyCreator > core::init::FastDensEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::saxs::FastSAXSEnergyCreator > core::init::FastSAXSEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::FreeMoietyEnergyCreator > core::init::FreeMoietyEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::custom_pair_distance::FullatomCustomPairDistanceEnergyCreator > core::init::FullatomCustomPairDistanceEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::disulfides::FullatomDisulfideEnergyCreator > core::init::FullatomDisulfideEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::GaussianOverlapEnergyCreator > core::init::GaussianOverlapEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::GenBornEnergyCreator > core::init::GenBornEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::GoapEnergyCreator > core::init::GoapEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::hackaro::HackAroEnergyCreator > core::init::HackAroEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::hbonds::HBondEnergyCreator > core::init::HBondEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::packing::HolesEnergyCreator > core::init::HolesEnergyCreator_registrator
static
EnergyMethodRegistrator< pack::interaction_graph::HPatchEnergyCreator > core::init::HPatchEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::HybridVDW_EnergyCreator > core::init::HybridVDW_EnergyCreator_registrator
static
ResourceOptionsRegistrator< core::import_pose::ImportPoseOptionsCreator > core::init::ImportPoseOptionsCreator_registrator
static
TaskOperationRegistrator< IncludeCurrentCreator > core::init::IncludeCurrentCreator_registrator
static
TaskOperationRegistrator< InitializeExtraRotsFromCommandlineCreator > core::init::InitializeExtraRotsFromCommandlineCreator_registrator
static
TaskOperationRegistrator< InitializeFromCommandlineCreator > core::init::InitializeFromCommandlineCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::IntermolEnergyCreator > core::init::IntermolEnergyCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::KofNConstraintCreator > core::init::KofNConstraintCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::LinearChainbreakEnergyCreator > core::init::LinearChainbreakEnergyCreator_registrator
static
ResourceLoaderRegistrator< core::membrane::io::LipoFileLoaderCreator > core::init::LipOFileLoaderCreator_registrator
static
ResourceOptionsRegistrator< core::membrane::io::LipoFileOptionsCreator > core::init::LipoFileLoaderCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::LK_BallEnergyCreator > core::init::LK_BallEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::LK_hackCreator > core::init::LK_hackCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::LK_PolarNonPolarEnergyCreator > core::init::LK_PolarNonPolarEnergyCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::LocalCoordinateConstraintCreator > core::init::LocalCoordinateConstraintCreator_registrator
static
EnergyMethodRegistrator< scoring::loop_graph::LoopCloseEnergyCreator > core::init::LoopCloseEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MembraneCbetaEnergyCreator > core::init::MembraneCbetaEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MembraneCenPairEnergyCreator > core::init::MembraneCenPairEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MembraneEnvEnergyCreator > core::init::MembraneEnvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MembraneEnvPenaltiesCreator > core::init::MembraneEnvPenaltiesCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MembraneEnvSmoothEnergyCreator > core::init::MembraneEnvSmoothEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MembraneLipoCreator > core::init::MembraneLipoCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MissingEnergyCreator > core::init::MissingEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MMBondAngleEnergyCreator > core::init::MMBondAngleEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MMBondLengthEnergyCreator > core::init::MMBondLengthEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MMLJEnergyInterCreator > core::init::MMLJEnergyInterCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MMLJEnergyIntraCreator > core::init::MMLJEnergyIntraCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::MMTorsionEnergyCreator > core::init::MMTorsionEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::MPCbetaEnergyCreator > core::init::MPCbetaEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::MPEnvEnergyCreator > core::init::MPEnvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::MPNonHelixPenaltyCreator > core::init::MPNonHelixPenaltyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::MPPairEnergyCreator > core::init::MPPairEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::MPTerminiPenaltyCreator > core::init::MPTerminiPenaltyCreator_registrator
static
EnergyMethodRegistrator< scoring::membrane::MPTMProjPenaltyCreator > core::init::MPTMProjPenaltyCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::MultiConstraintCreator > core::init::MultiConstraintCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::chemical_shift::RNA_ChemicalShiftEnergyCreator > core::init::NA_ChemicalShiftEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::NMerPSSMEnergyCreator > core::init::NMerPSSMEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::NMerRefEnergyCreator > core::init::NMerRefEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::NMerSVMEnergyCreator > core::init::NMerSVMEnergyCreator_registrator
static
TaskOperationRegistrator< NoRepackDisulfidesCreator > core::init::NoRepackDisulfidesCreator_registrator
static
ResFilterRegistrator< NoResFilterCreator > core::init::NoResFilterCreator_registrator
static
EnergyMethodRegistrator< scoring::nv::NVscoreCreator > core::init::NVscoreCreator_registrator
static
EnergyMethodRegistrator< scoring::geometric_solvation::OccludedHbondSolEnergy_onebodyCreator > core::init::OccludedHbondSolEnergy_onebodyCreator_registrator
static
EnergyMethodRegistrator< scoring::geometric_solvation::OccludedHbondSolEnergyCreator > core::init::OccludedHbondSolEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::OmegaTetherEnergyCreator > core::init::OmegaTetherEnergyCreator_registrator
static
TaskOperationRegistrator< OperateOnCertainResiduesCreator > core::init::OperateOnCertainResiduesCreator_registrator
static
TaskOperationRegistrator< OperateOnResidueSubsetCreator > core::init::OperateOnResidueSubsetCreator_registrator
static
TaskOperationRegistrator< OptCysHGCreator > core::init::OptCysHGCreator_registrator
static
TaskOperationRegistrator< OptHCreator > core::init::OptHCreator_registrator
static
EnergyMethodRegistrator< scoring::orbitals::OrbitalsScoreCreator > core::init::OrbitalsScoreCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::OtherPoseEnergyCreator > core::init::OtherPoseEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::P_AA_EnergyCreator > core::init::P_AA_EnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::P_AA_pp_EnergyCreator > core::init::P_AA_pp_EnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::PackStatEnergyCreator > core::init::PackStatEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::PairEnergyCreator > core::init::PairEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::electron_density::PattersonCorrEnergyCreator > core::init::PattersonCorrEnergyCreator_registrator
static
SilentStructRegistrator< core::import_pose::PDBSilentStructCreator > core::init::PDBSilentStructCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::PeptideBondEnergyCreator > core::init::PeptideBondEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::pHEnergyCreator > core::init::pHEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::PoissonBoltzmannEnergyCreator > core::init::PoissonBoltzmannEnergyCreator_registrator
static
ResourceLoaderRegistrator< core::import_pose::PoseFromPDBLoaderCreator > core::init::PoseFromPDBLoaderCreator_registrator
static
TaskOperationRegistrator< PreserveCBetaCreator > core::init::PreserveCBetaCreator_registrator
static
TaskOperationRegistrator< PreventRepackingCreator > core::init::PreventRepackingCreator_registrator
static
ResLvlTaskOperationRegistrator< PreventRepackingRLTCreator > core::init::PreventRepackingRLTCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ProClosureEnergyCreator > core::init::ProClosureEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ProQ_EnergyCreator > core::init::ProQ_EnergyCreator_registrator
static
SilentStructRegistrator< core::io::silent::ProteinSilentStruct_SinglePrecCreator > core::init::ProteinSilentStruct_SinglePrecCreator_registrator
static
SilentStructRegistrator< core::io::silent::ProteinSilentStructCreator > core::init::ProteinSilentStructCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::Rama2BOffsetEnergyCreator > core::init::Ramac2BOffsetEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::RamachandranEnergy2BCreator > core::init::RamachandranEnergy2BCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::RamachandranEnergyCreator > core::init::RamachandranEnergyCreator_registrator
static
TaskOperationRegistrator< ReadResfileAndObeyLengthEventsCreator > core::init::ReadResfileAndObeyLengthEventsCreator_registrator
static
TaskOperationRegistrator< ReadResfileCreator > core::init::ReadResfileCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ReferenceEnergyCreator > core::init::ReferenceEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ReferenceEnergyNoncanonicalCreator > core::init::ReferenceEnergyNoncanonicalCreator_registrator
static
ResidueSelectorRegistrator< AndResidueSelectorCreator > core::init::reg_AndResidueSelectorCreator
static
ResidueSelectorRegistrator< ChainSelectorCreator > core::init::reg_ChainSelectorCreator
static
ResidueSelectorRegistrator< InterGroupInterfaceByVectorSelectorCreator > core::init::reg_InterGroupInterfaceByVectorSelectorCreator
static
ResidueSelectorRegistrator< JumpDownstreamSelectorCreator > core::init::reg_JumpDownstreamSelectorCreator
static
ResidueSelectorRegistrator< JumpUpstreamSelectorCreator > core::init::reg_JumpUpstreamSelectorCreator
static
ResidueSelectorRegistrator< NeighborhoodResidueSelectorCreator > core::init::reg_NeighborhoodResidueSelectorCreator
static
ResidueSelectorRegistrator< NotResidueSelectorCreator > core::init::reg_NotResidueSelectorCreator
static
ResidueSelectorRegistrator< NumNeighborsSelectorCreator > core::init::reg_NumNeighborsSelectorCreator
static
ResidueSelectorRegistrator< OrResidueSelectorCreator > core::init::reg_OrResidueSelectorCreator
static
ResidueSelectorRegistrator< ResidueIndexSelectorCreator > core::init::reg_ResidueIndexSelectorCreator
static
TaskOperationRegistrator< ReplicateTaskCreator > core::init::ReplicateTaskCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ResidualDipolarCouplingEnergy_RohlCreator > core::init::ResidualDipolarCouplingEnergy_RohlCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::ResidualDipolarCouplingEnergyCreator > core::init::ResidualDipolarCouplingEnergyCreator_registrator
static
ResFilterRegistrator< ResidueHasPropertyCreator > core::init::ResidueHasPropertyCreator_registrator
static
ResFilterRegistrator< ResidueIndexIsCreator > core::init::ResidueIndexIsCreator_registrator
static
ResFilterRegistrator< ResidueIndexIsntCreator > core::init::ResidueIndexIsntCreator_registrator
static
ResFilterRegistrator< ResidueLacksPropertyCreator > core::init::ResidueLacksPropertyCreator_registrator
static
ResourceLoaderRegistrator< core::chemical::ResidueLoaderCreator > core::init::ResidueLoaderCreator_registrator
static
ResFilterRegistrator< ResidueName3IsCreator > core::init::ResidueName3IsCreator_registrator
static
ResFilterRegistrator< ResidueName3IsntCreator > core::init::ResidueName3IsntCreator_registrator
static
ResFilterRegistrator< ResiduePDBIndexIsCreator > core::init::ResiduePDBIndexIsCreator_registrator
static
ResFilterRegistrator< ResiduePDBIndexIsntCreator > core::init::ResiduePDBIndexIsntCreator_registrator
static
ResFilterRegistrator< ResiduePDBInfoHasLabelCreator > core::init::ResiduePDBInfoHasLabelCreator_registrator
static
ResFilterRegistrator< ResidueTypeFilterCreator > core::init::ResidueTypeResFilterCreator_registrator
static
ResourceOptionsRegistrator< core::chemical::ResidueLoaderOptionsCreator > core::init::ResiudeLoaderOptionsCreator_registrator
static
pre_talaris_2013_behavior_settings const core::init::restore_sc12_settings
TaskOperationRegistrator< RestrictAbsentCanonicalAASCreator > core::init::RestrictAbsentCanonicalAASCreator_registrator
static
ResLvlTaskOperationRegistrator< RestrictAbsentCanonicalAASRLTCreator > core::init::RestrictAbsentCanonicalAASRLTCreator_registrator
static
TaskOperationRegistrator< RestrictResidueToRepackingCreator > core::init::RestrictResidueToRepackingCreator_registrator
static
TaskOperationRegistrator< RestrictToRepackingCreator > core::init::RestrictToRepackingCreator_registrator
static
ResLvlTaskOperationRegistrator< RestrictToRepackingRLTCreator > core::init::RestrictToRepackingRLTCreator_registrator
static
TaskOperationRegistrator< RestrictYSDesignCreator > core::init::RestrictYSDesignCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::RG_Energy_FastCreator > core::init::RG_Energy_FastCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RG_Energy_RNACreator > core::init::RG_Energy_RNACreator_registrator
static
EnergyMethodRegistrator< scoring::methods::RG_LocalEnergyCreator > core::init::RG_LocalEnergyCreator_registrator
static
SilentStructRegistrator< core::io::silent::RigidBodySilentStructCreator > core::init::RigidBodySilentStructCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::RMS_EnergyCreator > core::init::RMS_EnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_BulgeEnergyCreator > core::init::RNA_BulgeEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::data::RNA_ChemicalMappingEnergyCreator > core::init::RNA_ChemicalMappingEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::data::RNA_DataBackboneEnergyCreator > core::init::RNA_DataBackboneEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::elec::RNA_FA_ElecEnergyCreator > core::init::RNA_FA_ElecEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_FullAtomStackingEnergyCreator > core::init::RNA_FullAtomStackingEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_FullAtomVDW_BasePhosphateCreator > core::init::RNA_FullAtomVDW_BasePhosphateCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_JR_SuiteEnergyCreator > core::init::RNA_JR_SuiteEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_LJ_BaseEnergyCreator > core::init::RNA_LJ_BaseEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_Mg_EnergyCreator > core::init::RNA_Mg_EnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_PairwiseLowResolutionEnergyCreator > core::init::RNA_PairwiseLowResolutionEnergyCreator_registrator
static
SilentStructRegistrator< core::io::silent::RNA_SilentStructCreator > core::init::RNA_SilentStructCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_SugarCloseEnergyCreator > core::init::RNA_SugarCloseEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_SuiteEnergyCreator > core::init::RNA_SuiteEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_TorsionEnergyCreator > core::init::RNA_TorsionEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::RNA_VDW_EnergyCreator > core::init::RNA_VDW_EnergyCreator_registrator
static
TaskOperationRegistrator< RotamerExplosionCreator > core::init::RotamerExplosionCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::SA_EnergyCreator > core::init::SA_EnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::saxs::SAXSEnergyCreator > core::init::SAXSEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::saxs::SAXSEnergyCreatorCEN > core::init::SAXSEnergyCreatorCEN_registrator
static
EnergyMethodRegistrator< scoring::saxs::SAXSEnergyCreatorFA > core::init::SAXSEnergyCreatorFA_registrator
static
SilentStructRegistrator< core::io::silent::ScoreFileSilentStructCreator > core::init::ScoreFileSilentStructCreator_registrator
static
SilentStructRegistrator< core::io::silent::ScoreJumpFileSilentStructCreator > core::init::ScoreJumpFileSilentStructCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::SecondaryStructureEnergyCreator > core::init::SecondaryStructureEnergyCreator_registrator
static
SequenceRegistrator< core::sequence::SequenceCouplingCreator > core::init::SequenceCouplingCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::SequenceProfileConstraintCreator > core::init::SequenceProfileConstraintCreator_registrator
static
SequenceRegistrator< core::sequence::SequenceProfileCreator > core::init::SequenceProfileCreator_registrator
static
TaskOperationRegistrator< SetRotamerCouplingsCreator > core::init::SetRotamerCouplingsCreator_registrator
static
TaskOperationRegistrator< SetRotamerLinksCreator > core::init::SetRotamerLinksCreator_registrator
static
ResourceLoaderRegistrator< core::io::silent::SilentFileLoaderCreator > core::init::SilentFileLoaderCreator_registrator
static
ResourceOptionsRegistrator< core::io::silent::SilentFileOptionsCreator > core::init::SilentFileOptionsCreator_registrator
static
SequenceRegistrator< core::sequence::SimpleSequenceCreator > core::init::SimpleSequenceCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::SiteConstraintCreator > core::init::SiteConstraintCreator_registrator
static
ConstraintRegistrator< core::scoring::constraints::SiteConstraintResiduesCreator > core::init::SiteConstraintResiduesCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::SmoothCenPairEnergyCreator > core::init::SmoothCenPairEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::SmoothEnvEnergyCreator > core::init::SmoothEnvEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::rna::StackElecEnergyCreator > core::init::StackElecEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::SuckerEnergyCreator > core::init::SuckerEnergyCreator_registrator
static
EnergyMethodRegistrator< pack::interaction_graph::SurfaceEnergyCreator > core::init::SurfaceEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::packing::SurfEnergyCreator > core::init::SurfEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::packing::SurfVolEnergyCreator > core::init::SurfVolEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::sym_e::symECreator > core::init::symECreator_registrator
static
ResourceLoaderRegistrator< core::conformation::symmetry::SymmDataLoaderCreator > core::init::SymmDataLoaderCreator_registrator
static
ResourceOptionsRegistrator< core::conformation::symmetry::SymmDataOptionsCreator > core::init::SymmDataOptionsCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::SymmetricLigandEnergyCreator > core::init::SymmetricLigandEnergyCreator_registrator
static
basic::Tracer core::init::TR("core.init.score_function_corrections")
static
basic::Tracer core::init::TR("core.init")
static
EnergyMethodRegistrator< scoring::methods::UnfoldedStateEnergyCreator > core::init::UnfoldedStateEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::vdwaals::VDW_EnergyCreator > core::init::VDW_EnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::WaterAdductHBondEnergyCreator > core::init::WaterAdductHBondEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::WaterAdductIntraEnergyCreator > core::init::WaterAdductIntraEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::cryst::XtalMLEnergyCreator > core::init::XtalMLEnergyCreator_registrator
static
EnergyMethodRegistrator< scoring::methods::YHHPlanarityEnergyCreator > core::init::YYHPlanarityEnergyCreator_registrator
static