chi(unsigned int seqpos) const | core::io::raw_data::DecoyStruct | inline |
chi(unsigned int seqpos, utility::vector1< Real > chis) | core::io::raw_data::DecoyStruct | inline |
chi_ | core::io::raw_data::DecoyStruct | protected |
coords(unsigned int seqpos) const | core::io::raw_data::DecoyStruct | inline |
coords(unsigned int seqpos, Vector coords) | core::io::raw_data::DecoyStruct | inline |
coords_ | core::io::raw_data::DecoyStruct | protected |
decoy_tag() | core::io::raw_data::RawStruct | inline |
decoy_tag(std::string tag) | core::io::raw_data::RawStruct | inline |
decoy_tag_ | core::io::raw_data::RawStruct | protected |
DecoyStruct(Size const nres_in) | core::io::raw_data::DecoyStruct | inline |
DecoyStruct() | core::io::raw_data::DecoyStruct | inline |
DecoyStruct(core::pose::Pose const &pose, std::string tag="empty_tag", bool fa=false) | core::io::raw_data::DecoyStruct | |
fill_pose(core::pose::Pose &pose) | core::io::raw_data::DecoyStruct | virtual |
fill_pose(core::pose::Pose &pose, core::chemical::ResidueTypeSet const &residue_set) | core::io::raw_data::DecoyStruct | virtual |
fullatom() const | core::io::raw_data::DecoyStruct | inline |
fullatom(bool fullatom) | core::io::raw_data::DecoyStruct | inline |
fullatom_ | core::io::raw_data::DecoyStruct | protected |
get_debug_rmsd() | core::io::raw_data::DecoyStruct | virtual |
nres() | core::io::raw_data::RawStruct | inline |
nres(Size nres) | core::io::raw_data::RawStruct | inline |
nres_ | core::io::raw_data::RawStruct | protected |
omega(unsigned int seqpos) const | core::io::raw_data::DecoyStruct | inline |
omega(unsigned int seqpos, Real omega) | core::io::raw_data::DecoyStruct | inline |
omega_ | core::io::raw_data::DecoyStruct | protected |
phi(unsigned int seqpos) const | core::io::raw_data::DecoyStruct | inline |
phi(unsigned int seqpos, Real phi) | core::io::raw_data::DecoyStruct | inline |
phi_ | core::io::raw_data::DecoyStruct | protected |
print_conformation(std::ostream &output) const | core::io::raw_data::DecoyStruct | virtual |
print_header(std::ostream &out, std::map< std::string, core::Real > const &score_map, std::map< std::string, std::string > const &string_map=(std::map< std::string, std::string >()), bool print_sequence=true) const | core::io::raw_data::RawStruct | virtual |
print_scores(std::ostream &out, std::map< std::string, core::Real > const &score_map, std::map< std::string, std::string > const &string_map=(std::map< std::string, std::string >())) const | core::io::raw_data::RawStruct | virtual |
psi(unsigned int seqpos) const | core::io::raw_data::DecoyStruct | inline |
psi(unsigned int seqpos, Real psi) | core::io::raw_data::DecoyStruct | inline |
psi_ | core::io::raw_data::DecoyStruct | protected |
resize(Size const nres_in) | core::io::raw_data::DecoyStruct | |
secstruct(unsigned int seqpos) const | core::io::raw_data::DecoyStruct | inline |
secstruct(unsigned int seqpos, char ss) | core::io::raw_data::DecoyStruct | inline |
secstruct_ | core::io::raw_data::DecoyStruct | protected |
sequence() | core::io::raw_data::RawStruct | inline |
sequence(std::string sequence) | core::io::raw_data::RawStruct | inline |
sequence_ | core::io::raw_data::RawStruct | protected |
~DecoyStruct() | core::io::raw_data::DecoyStruct | inline |
~RawStruct() | core::io::raw_data::RawStruct | virtual |