Rosetta Core  2014.35
Public Member Functions | Private Attributes | List of all members
core::scoring::func::SkipViolFunc Class Reference

#include <SkipViolFunc.hh>

Public Member Functions

 SkipViolFunc (Real const weight, FuncOP myfunc)
 
 ~SkipViolFunc ()
 
FuncOP clone () const
 
Real func (Real const x) const
 Returns a value representing this function evaluated at a given point. More...
 
Real dfunc (Real const x) const
 Returns a value representing the derivative of this function evaluated at a given point. More...
 
void read_data (std::istream &)
 initialize this Func from the given std::istream. More...
 
virtual core::Size show_violations (std::ostream &out, Real r, core::Size verbose_level, Real threshold=1) const
 show some sort of stringified representation of the violations for this constraint. More...
 
virtual void show_definition (std::ostream &out) const
 shows the definition of this function, usually the string type of function and the parameters passed in to the constructor. More...
 
Size viols () const
 
- Public Member Functions inherited from core::scoring::func::Func
virtual ~Func ()
 Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...
 
virtual Real estimate_dfunc (Real const r) const
 Estimates the derivative of this function at a given radius by calculating the slope of the secant line from func(r) and func(r+1e-05). More...
 
virtual Real estimate_dfunc (Real const r, Real const h) const
 Estimates the derivative of this function at a given radius by calculating the slope of the secant line from func(r) and func(r+h). More...
 
virtual void show (std::ostream &out) const
 Prints out space-delimited columns for r, func, dfunc and dfunc_est. The values for func, dfunc and dfunc_est are plotted as a function of r, which is varied from 2-20 in steps of 0.5. The value for dfunc_est is the estimated by the method estimate_dfunc( r ). More...
 

Private Attributes

Real weight_
 
core::Size count_viols_
 
FuncOP func_to_weight_
 

Constructor & Destructor Documentation

core::scoring::func::SkipViolFunc::SkipViolFunc ( Real const  weight,
FuncOP  myfunc 
)
inline

Referenced by clone().

core::scoring::func::SkipViolFunc::~SkipViolFunc ( )
inline

Member Function Documentation

FuncOP core::scoring::func::SkipViolFunc::clone ( ) const
inlinevirtual

Implements core::scoring::func::Func.

References SkipViolFunc().

Real core::scoring::func::SkipViolFunc::dfunc ( Real const  const) const
virtual

Returns a value representing the derivative of this function evaluated at a given point.

Implements core::scoring::func::Func.

References func_to_weight_, and weight_.

Real core::scoring::func::SkipViolFunc::func ( Real const  const) const
virtual

Returns a value representing this function evaluated at a given point.

Implements core::scoring::func::Func.

References func_to_weight_, and weight_.

void core::scoring::func::SkipViolFunc::read_data ( std::istream &  )
virtual

initialize this Func from the given std::istream.

Reimplemented from core::scoring::func::Func.

References count_viols_, func_to_weight_, core::scoring::func::FuncFactory::func_types_, and weight_.

void core::scoring::func::SkipViolFunc::show_definition ( std::ostream &  out) const
virtual

shows the definition of this function, usually the string type of function and the parameters passed in to the constructor.

Reimplemented from core::scoring::func::Func.

References count_viols_, and func_to_weight_.

core::Size core::scoring::func::SkipViolFunc::show_violations ( std::ostream &  out,
Real  r,
core::Size  verbose_level,
Real  threshold = 1 
) const
virtual

show some sort of stringified representation of the violations for this constraint.

Reimplemented from core::scoring::func::Func.

References func_to_weight_.

Size core::scoring::func::SkipViolFunc::viols ( ) const
inline

References count_viols_.

Member Data Documentation

core::Size core::scoring::func::SkipViolFunc::count_viols_
private

Referenced by read_data(), show_definition(), and viols().

FuncOP core::scoring::func::SkipViolFunc::func_to_weight_
private
Real core::scoring::func::SkipViolFunc::weight_
private

Referenced by dfunc(), func(), and read_data().


The documentation for this class was generated from the following files: