core::chemical::AddAtomAlias Class Reference

A patch operation for adding an atom alias to a ResidueType. More...

#include <PatchOperation.hh>

Public Member Functions
	AddAtomAlias (std::string const &rosetta_atom_name_in, std::string const &alias_in)
virtual bool	apply (ResidueType &rsd) const
	Apply this patch to the given ResidueType. More...
Public Member Functions inherited from core::chemical::PatchOperation
virtual	~PatchOperation ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

Private Attributes
std::string	rosetta_atom_name_
std::string	alias_

Detailed Description

A patch operation for adding an atom alias to a ResidueType.

Note

See residue_io.cc for a description of atom aliases.

Remarks

Atom aliases were graciously added to Rosetta by Rocco Moretti.

Author

Labonte JWLab.nosp@m.onte.nosp@m.@jhu..nosp@m.edu

Constructor & Destructor Documentation

core::chemical::AddAtomAlias::AddAtomAlias	(	std::string const &	rosetta_atom_name_in,
		std::string const &	alias_in
	)

Member Function Documentation

bool core::chemical::AddAtomAlias::apply ( ResidueType &  rsd ) const

virtual

Apply this patch to the given ResidueType.

Returns

true on failure

Remarks

Because ResidueType is not throwing exceptions, this will never return true. Failure will lead to exits from ResidueType. ~Labonte

Implements core::chemical::PatchOperation.

References core::chemical::ResidueType::add_atom_alias(), alias_, and rosetta_atom_name_.

Member Data Documentation

std::string core::chemical::AddAtomAlias::alias_

private

Referenced by apply().

std::string core::chemical::AddAtomAlias::rosetta_atom_name_

private

Referenced by apply().

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The documentation for this class was generated from the following files:

• src/core/chemical/PatchOperation.hh
• src/core/chemical/PatchOperation.cc