#include <InterfaceDefinitionCalculatorBase.hh>

Public Member Functions
	InterfaceDefinitionCalculator (core::Size const chain1_number, core::Size const chain2_number)

	InterfaceDefinitionCalculator (char const chain1_letter, char const chain2_letter)

core::pose::metrics::PoseMetricCalculatorOP	clone () const =0

Public Member Functions inherited from core::pose::metrics::StructureDependentCalculator
	StructureDependentCalculator ()

void	notify_structure_change ()

void	get (std::string const &key, basic::MetricValueBase &val, Pose const &this_pose)

std::string	get (std::string const &key, Pose const &this_pose)

Public Member Functions inherited from core::pose::metrics::PoseMetricCalculator
	PoseMetricCalculator ()

virtual void	notify_energy_change ()

Protected Member Functions
virtual std::string	print (std::string const &key) const =0

virtual void	lookup (std::string const &key, basic::MetricValueBase *valptr) const =0

virtual void	recompute (core::pose::Pose const &this_pose)=0

virtual void	verify_chain_setup (core::pose::Pose const &pose)

virtual core::Size	chain_letter_to_number (core::pose::Pose const &pose, char const chain_id)

virtual void	fill_in_chain_terminii (core::pose::Pose const &pose)

Protected Attributes
core::Size	ch1_begin_num_

core::Size	ch1_end_num_

core::Size	ch2_begin_num_

core::Size	ch2_end_num_

core::Size	chain1_number_

core::Size	chain2_number_

char	chain1_letter_

char	chain2_letter_

bool	got_chain_numbers_

Constructor & Destructor Documentation

core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::InterfaceDefinitionCalculator	(	core::Size const	chain1_number,
		core::Size const	chain2_number
	)

core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::InterfaceDefinitionCalculator	(	char const	chain1_letter,
		char const	chain2_letter
	)

Member Function Documentation

Size core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::chain_letter_to_number	(	core::pose::Pose const &	pose,
		char const	chain_id
	)

protectedvirtual

References core::pose::Pose::chain(), core::pose::Pose::pdb_info(), and core::pose::Pose::total_residue().

Referenced by verify_chain_setup().

core::pose::metrics::PoseMetricCalculatorOP core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::clone ( ) const

pure virtual

Implements core::pose::metrics::PoseMetricCalculator.

Implemented in core::pose::metrics::simple_calculators::InterfaceSasaDefinitionCalculator, and core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator.

void core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::fill_in_chain_terminii ( core::pose::Pose const & pose )

protectedvirtual

References ch1_begin_num_, ch1_end_num_, ch2_begin_num_, ch2_end_num_, chain1_number_, chain2_number_, core::conformation::Conformation::chain_begin(), core::conformation::Conformation::chain_end(), and core::pose::Pose::conformation().

Referenced by verify_chain_setup().

virtual void core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::lookup	(	std::string const &	key,
		basic::MetricValueBase *	valptr
	)		const

protectedpure virtual

Implements core::pose::metrics::StructureDependentCalculator.

Implemented in core::pose::metrics::simple_calculators::InterfaceSasaDefinitionCalculator, and core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator.

virtual std::string core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::print ( std::string const & key ) const

protectedpure virtual

Implements core::pose::metrics::StructureDependentCalculator.

Implemented in core::pose::metrics::simple_calculators::InterfaceSasaDefinitionCalculator, and core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator.

virtual void core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::recompute ( core::pose::Pose const & this_pose )

protectedpure virtual

Implements core::pose::metrics::StructureDependentCalculator.

Implemented in core::pose::metrics::simple_calculators::InterfaceSasaDefinitionCalculator, and core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator.

void core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::verify_chain_setup ( core::pose::Pose const & pose )

protectedvirtual

References chain1_letter_, chain1_number_, chain2_letter_, chain2_number_, chain_letter_to_number(), fill_in_chain_terminii(), and got_chain_numbers_.

Member Data Documentation

core::Size core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::ch1_begin_num_

protected

Referenced by fill_in_chain_terminii().

core::Size core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::ch1_end_num_

protected

Referenced by fill_in_chain_terminii().

core::Size core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::ch2_begin_num_

protected

Referenced by fill_in_chain_terminii().

core::Size core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::ch2_end_num_

protected

Referenced by fill_in_chain_terminii().

char core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::chain1_letter_

protected

Referenced by verify_chain_setup().

core::Size core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::chain1_number_

protected

Referenced by core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator::clone(), core::pose::metrics::simple_calculators::InterfaceSasaDefinitionCalculator::clone(), fill_in_chain_terminii(), and verify_chain_setup().

char core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::chain2_letter_

protected

Referenced by verify_chain_setup().

core::Size core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::chain2_number_

protected

Referenced by core::pose::metrics::simple_calculators::InterfaceNeighborDefinitionCalculator::clone(), core::pose::metrics::simple_calculators::InterfaceSasaDefinitionCalculator::clone(), fill_in_chain_terminii(), and verify_chain_setup().

bool core::pose::metrics::simple_calculators::InterfaceDefinitionCalculator::got_chain_numbers_

protected

Referenced by verify_chain_setup().

The documentation for this class was generated from the following files:

src/core/pose/metrics/simple_calculators/InterfaceDefinitionCalculatorBase.hh
src/core/pose/metrics/simple_calculators/InterfaceDefinitionCalculatorBase.cc

Public Member Functions

Protected Member Functions

Protected Attributes

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation