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Rosetta Core
2014.35
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#include <FACTSPose.hh>
Public Types | |
typedef conformation::Residue | Residue |
typedef conformation::ResidueOP | ResidueOP |
Public Member Functions | |
FACTSPoseInfo () | |
FACTSPoseInfo (FACTSPoseInfo const &src) | |
basic::datacache::CacheableDataOP | clone () const |
Size | size () const |
FACTSResidueInfo & | residue_info (Size const i) |
FACTSResidueInfo const & | residue_info (Size const i) const |
bool | being_packed (Size const seqpos) const |
void | set_placeholder (Size const i, ResidueOP rsd, FACTSResidueInfoOP info) |
FACTSResidueInfo const & | placeholder_info (Size const seqpos) const |
Residue const & | placeholder_residue (Size const seqpos) const |
void | initialize (pose::Pose const &pose, FACTSRsdTypeMap &rsdtypemap) |
void | set_repack_list (utility::vector1< bool > const &repacking_residues) |
bool | is_changed (pose::Pose const &pose) |
void | update_enumeration_shell (pose::Pose const &pose, bool const enumerate_second_shell=false) |
bool | context_derivative_empty () |
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virtual | ~CacheableData () |
core::scoring::FACTSPoseInfo::FACTSPoseInfo | ( | ) |
Referenced by clone().
core::scoring::FACTSPoseInfo::FACTSPoseInfo | ( | FACTSPoseInfo const & | src | ) |
References being_packed_, context_derivative_empty_, placeholder_info_, placeholder_residue_, residue_info_, and size().
References being_packed_.
Referenced by core::scoring::FACTSPotential::get_template_born_radii().
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inlinevirtual |
Implements basic::datacache::CacheableData.
References FACTSPoseInfo().
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inline |
References context_derivative_empty_.
void core::scoring::FACTSPoseInfo::initialize | ( | pose::Pose const & | pose, |
FACTSRsdTypeMap & | rsdtypemap | ||
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bool core::scoring::FACTSPoseInfo::is_changed | ( | pose::Pose const & | pose | ) |
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inline |
References placeholder_info_.
References placeholder_residue_.
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inline |
References residue_info_.
Referenced by core::scoring::FACTSPotential::eval_atom_nonpolar_derivative(), core::scoring::FACTSPotential::eval_atom_polar_derivative(), core::scoring::FACTSPotential::get_single_rotamer_born_radii(), core::scoring::FACTSPotential::get_template_born_radii(), is_changed(), core::scoring::methods::FACTSEnergy::residue_pair_energy(), update_enumeration_shell(), and core::scoring::FACTSPotential::update_residue_for_packing().
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inline |
References residue_info_.
void core::scoring::FACTSPoseInfo::set_placeholder | ( | Size const | i, |
ResidueOP | rsd, | ||
FACTSResidueInfoOP | info | ||
) |
References placeholder_info_, and placeholder_residue_.
void core::scoring::FACTSPoseInfo::set_repack_list | ( | utility::vector1< bool > const & | repacking_residues | ) |
References being_packed_, and size().
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inline |
References residue_info_.
Referenced by FACTSPoseInfo(), core::scoring::FACTSPotential::get_template_born_radii(), and set_repack_list().
void core::scoring::FACTSPoseInfo::update_enumeration_shell | ( | pose::Pose const & | pose, |
bool const | enumerate_second_shell = false |
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utility::vector1< bool > core::scoring::FACTSPoseInfo::being_packed_ |
Referenced by being_packed(), FACTSPoseInfo(), and set_repack_list().
bool core::scoring::FACTSPoseInfo::context_derivative_empty_ |
Referenced by context_derivative_empty(), and FACTSPoseInfo().
utility::vector1< FACTSResidueInfoOP > core::scoring::FACTSPoseInfo::placeholder_info_ |
Referenced by FACTSPoseInfo(), initialize(), placeholder_info(), and set_placeholder().
utility::vector1< ResidueOP > core::scoring::FACTSPoseInfo::placeholder_residue_ |
Referenced by FACTSPoseInfo(), initialize(), placeholder_residue(), and set_placeholder().
utility::vector1< FACTSResidueInfoOP > core::scoring::FACTSPoseInfo::residue_info_ |
Referenced by FACTSPoseInfo(), initialize(), residue_info(), and size().