Rosetta Core  2014.35
core::scoring::etable::MembEtable Member List

This is the complete list of members for core::scoring::etable::MembEtable, including all inherited members.

add_long_range_dampingcore::scoring::etable::MembEtableprivate
analytic_etable_derivatives(conformation::Atom const &at1, conformation::Atom const &at2, Real &dljatrE_ddis, Real &dljrepE_ddis, Real &dfasolE_ddis, Real &inv_d) const core::scoring::etable::Etableinline
analytic_etable_evaluation(conformation::Atom const &at1, conformation::Atom const &at2, Real &lj_atrE, Real &lj_repE, Real &fa_solE, Real &d2) const core::scoring::etable::Etableinline
analytic_lk_derivatives(conformation::Atom const &at1, conformation::Atom const &at2, Real &dfasolE1_ddis, Real &dfasolE2_ddis, Real &inv_d) const core::scoring::etable::Etableinline
analytic_lk_energy(conformation::Atom const &at1, conformation::Atom const &at2, Real &fa_solE1, Real &fa_solE2) const core::scoring::etable::Etableinline
analytic_params_for_pair(Size atype1, Size atype2) const core::scoring::etable::Etableinline
atom_set() const core::scoring::etable::MembEtableinline
atom_set() const core::scoring::etable::MembEtableinline
atom_set_core::scoring::etable::MembEtableprivate
atom_type(int const type)core::scoring::etable::MembEtableinlineprivate
atom_type(int const type)core::scoring::etable::MembEtableinlineprivate
bins_per_A2core::scoring::etable::MembEtableprivate
calc_etable_value(Real &dis2, int &atype1, int &atype2, Real &solvE1, Real &solvE2, Real &dsolvE1, Real &dsolvE2, ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, Real &memb_solvE1, Real &memb_solvE2, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value, Real &memb_dsolvE1, Real &memb_dsolvE2)core::scoring::etable::MembEtableprivate
calc_etable_value(Real &dis2, int &atype1, int &atype2, Real &solvE1, Real &solvE2, Real &dsolvE1, Real &dsolvE2, ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, Real &memb_solvE1, Real &memb_solvE2, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value, Real &memb_dsolvE1, Real &memb_dsolvE2)core::scoring::etable::MembEtableprivate
copy_from(Etable const *source)core::scoring::etable::MembEtable
copy_from(Etable const *source)core::scoring::etable::MembEtable
cubic_polynomial_deriv(Real const x, CubicPolynomial const &cp)core::scoring::etable::Etableinlinestatic
cubic_polynomial_from_spline(Real xlo, Real xhi, SplineParameters const &sp)core::scoring::etable::Etablestatic
dljatr() const core::scoring::etable::Etableinline
dljrep() const core::scoring::etable::Etableinline
dsolv() const core::scoring::etable::Etableinline
dsolv1() const core::scoring::etable::MembEtableinline
dsolv1() const core::scoring::etable::MembEtableinline
dsolv1_core::scoring::etable::MembEtableprivate
dsolv2() const core::scoring::etable::MembEtableinline
dsolv2() const core::scoring::etable::MembEtableinline
dsolv2_core::scoring::etable::MembEtableprivate
epsiloncore::scoring::etable::MembEtableprivate
Etable typedefcore::scoring::etable::MembEtable
Etable typedefcore::scoring::etable::MembEtable
core::scoring::etable::Etable::Etable(chemical::AtomTypeSetCAP atom_set_in, EtableOptions const &options, std::string const alternate_parameter_set="")core::scoring::etable::Etable
etable_disbinscore::scoring::etable::MembEtableprivate
eval_cubic_polynomial(Real const x, CubicPolynomial const &sp)core::scoring::etable::Etableinlinestatic
fasol_cubic_poly_far_xhi() const core::scoring::etable::Etableinline
fasol_cubic_poly_far_xlo() const core::scoring::etable::Etableinline
get_bins_per_A2() const core::scoring::etable::MembEtableinline
get_bins_per_A2() const core::scoring::etable::MembEtableinline
get_lj_hbond_hdis() const core::scoring::etable::Etableinline
get_lj_hbond_OH_donor_dis() const core::scoring::etable::Etableinline
get_safe_max_dis2() const core::scoring::etable::MembEtableinline
get_safe_max_dis2() const core::scoring::etable::MembEtableinline
hydrogen_interaction_cutoff2() const core::scoring::etable::MembEtableinline
hydrogen_interaction_cutoff2() const core::scoring::etable::MembEtableinline
hydrogen_interaction_cutoff2_core::scoring::etable::MembEtableprivate
input_etable(ObjexxFCL::FArray3D< Real > &etable, const std::string label, std::istream &in)core::scoring::etable::MembEtableprivate
input_etable(ObjexxFCL::FArray3D< Real > &etable, const std::string label, std::istream &in)core::scoring::etable::MembEtableprivate
interpolated_analytic_etable_evaluation(conformation::Atom const &at1, conformation::Atom const &at2, Real &lj_atrE, Real &lj_repE, Real &fa_solE, Real &d2) const core::scoring::etable::Etable
lj_hbond_accOch_discore::scoring::etable::MembEtableprivate
lj_hbond_accOch_hdiscore::scoring::etable::MembEtableprivate
lj_hbond_discore::scoring::etable::MembEtableprivate
lj_hbond_hdiscore::scoring::etable::MembEtableprivate
lj_radius(int const i) const core::scoring::etable::MembEtableinline
lj_radius(int const i) const core::scoring::etable::MembEtableinline
lj_radius_core::scoring::etable::MembEtableprivate
lj_slope_interceptcore::scoring::etable::MembEtableprivate
lj_switch_dis2sigmacore::scoring::etable::MembEtableprivate
lj_use_hbond_radiicore::scoring::etable::MembEtableprivate
lj_use_lj_deriv_slopecore::scoring::etable::MembEtableprivate
lj_use_water_radiicore::scoring::etable::MembEtableprivate
lj_water_discore::scoring::etable::MembEtableprivate
lj_water_hdiscore::scoring::etable::MembEtableprivate
lj_wdepth(int const i) const core::scoring::etable::Etableinline
ljatr() const core::scoring::etable::Etableinline
ljrep() const core::scoring::etable::Etableinline
lk_dgfree(int const i) const core::scoring::etable::MembEtableinline
lk_dgfree(int const i) const core::scoring::etable::MembEtableinline
lk_dgfree_core::scoring::etable::MembEtableprivate
lk_dgrefce() const core::scoring::etable::MembEtableinline
lk_dgrefce() const core::scoring::etable::MembEtableinline
lk_dgrefce_core::scoring::etable::MembEtableprivate
lk_inv_lambda2(int const i) const core::scoring::etable::Etableinline
lk_lambda(int const i) const core::scoring::etable::MembEtableinline
lk_lambda(int const i) const core::scoring::etable::MembEtableinline
lk_lambda_core::scoring::etable::MembEtableprivate
lk_min_dis2sigmacore::scoring::etable::MembEtableprivate
lk_volume(int const i) const core::scoring::etable::MembEtableinline
lk_volume(int const i) const core::scoring::etable::MembEtableinline
lk_volume_core::scoring::etable::MembEtableprivate
long_range_damping_lengthcore::scoring::etable::MembEtableprivate
make_pairenergy_table()core::scoring::etable::MembEtableprivate
make_pairenergy_table()core::scoring::etable::MembEtableprivate
max_dis() const core::scoring::etable::MembEtableinline
max_dis() const core::scoring::etable::MembEtableinline
max_dis2core::scoring::etable::MembEtableprivate
max_dis_core::scoring::etable::MembEtableprivate
max_heavy_heavy_cutoff() const core::scoring::etable::Etableinline
max_heavy_hydrogen_cutoff() const core::scoring::etable::Etableinline
max_hydrogen_hydrogen_cutoff() const core::scoring::etable::Etableinline
max_hydrogen_lj_radius() const core::scoring::etable::MembEtable
max_hydrogen_lj_radius() const core::scoring::etable::MembEtable
max_hydrogen_lj_radius_core::scoring::etable::MembEtableprivate
max_non_hydrogen_lj_radius() const core::scoring::etable::MembEtable
max_non_hydrogen_lj_radius() const core::scoring::etable::MembEtable
max_non_hydrogen_lj_radius_core::scoring::etable::MembEtableprivate
memb_dsolv1() const core::scoring::etable::MembEtableinline
memb_dsolv1() const core::scoring::etable::MembEtableinline
memb_dsolv1_core::scoring::etable::MembEtableprivate
memb_dsolv2() const core::scoring::etable::MembEtableinline
memb_dsolv2() const core::scoring::etable::MembEtableinline
memb_dsolv2_core::scoring::etable::MembEtableprivate
memb_lk_dgfree(int const i) const core::scoring::etable::MembEtableinline
memb_lk_dgfree(int const i) const core::scoring::etable::MembEtableinline
memb_lk_dgfree_core::scoring::etable::MembEtableprivate
memb_lk_dgrefce() const core::scoring::etable::MembEtableinline
memb_lk_dgrefce() const core::scoring::etable::MembEtableinline
memb_lk_dgrefce_core::scoring::etable::MembEtableprivate
memb_solv1() const core::scoring::etable::MembEtableinline
memb_solv1() const core::scoring::etable::MembEtableinline
memb_solv1_core::scoring::etable::MembEtableprivate
memb_solv2() const core::scoring::etable::MembEtableinline
memb_solv2() const core::scoring::etable::MembEtableinline
memb_solv2_core::scoring::etable::MembEtableprivate
MembEtable(chemical::AtomTypeSetCAP atom_set_in, EtableOptions const &options, std::string const alternate_parameter_set="")core::scoring::etable::MembEtable
MembEtable(chemical::AtomTypeSetCAP atom_set_in, EtableOptions const &options, std::string const alternate_parameter_set="")core::scoring::etable::MembEtable
min_discore::scoring::etable::MembEtableprivate
min_dis2core::scoring::etable::MembEtableprivate
modify_pot()core::scoring::etable::MembEtableprivate
modify_pot()core::scoring::etable::MembEtableprivate
n_atomtypescore::scoring::etable::MembEtableprivate
core::scoring::etable::Etable::n_atomtypes() const core::scoring::etable::Etableinline
nblist_dis2_cutoff_HH() const core::scoring::etable::MembEtableinline
nblist_dis2_cutoff_HH() const core::scoring::etable::MembEtableinline
nblist_dis2_cutoff_HH_core::scoring::etable::MembEtableprivate
nblist_dis2_cutoff_XH() const core::scoring::etable::MembEtableinline
nblist_dis2_cutoff_XH() const core::scoring::etable::MembEtableinline
nblist_dis2_cutoff_XH_core::scoring::etable::MembEtableprivate
nblist_dis2_cutoff_XX() const core::scoring::etable::MembEtableinline
nblist_dis2_cutoff_XX() const core::scoring::etable::MembEtableinline
nblist_dis2_cutoff_XX_core::scoring::etable::MembEtableprivate
output_etable(ObjexxFCL::FArray3D< Real > &etable, std::string label, std::ostream &out)core::scoring::etable::MembEtableprivate
output_etable(ObjexxFCL::FArray3D< Real > &etable, std::string label, std::ostream &out)core::scoring::etable::MembEtableprivate
precalc_etable_coefficients(ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value)core::scoring::etable::MembEtableprivate
precalc_etable_coefficients(ObjexxFCL::FArray2< Real > &lj_sigma, ObjexxFCL::FArray1< Real > &lk_inv_lambda2, ObjexxFCL::FArray2< Real > &lk_coeff, ObjexxFCL::FArray2< Real > &memb_lk_coeff, ObjexxFCL::FArray2< Real > &lk_min_dis2sigma_value, ObjexxFCL::FArray2< Real > &memb_lk_min_dis2sigma_value)core::scoring::etable::MembEtableprivate
safe_max_dis2core::scoring::etable::MembEtableprivate
smooth_etables()core::scoring::etable::MembEtableprivate
smooth_etables()core::scoring::etable::MembEtableprivate
solv1() const core::scoring::etable::MembEtableinline
solv1() const core::scoring::etable::MembEtableinline
solv1_core::scoring::etable::MembEtableprivate
solv2() const core::scoring::etable::MembEtableinline
solv2() const core::scoring::etable::MembEtableinline
solv2_core::scoring::etable::MembEtableprivate
Wradiuscore::scoring::etable::MembEtableprivate
~Etable()core::scoring::etable::Etablevirtual