Rosetta Core  2014.35
core::pack::task::PackerTask_ Member List

This is the complete list of members for core::pack::task::PackerTask_, including all inherited members.

AA typedefcore::pack::task::PackerTask
add_behavior(std::string const &behavior)core::pack::task::PackerTask_virtual
add_behavior(std::string const &behavior, Size resid)core::pack::task::PackerTask_virtual
adducts(Size resid) const core::pack::task::PackerTask_virtual
and_max_rotbump_energy(Real setting)core::pack::task::PackerTask_virtual
append_rotamer_operation(rotamer_set::RotamerOperationOP rotop)core::pack::task::PackerTask_virtual
append_rotamerset_operation(rotamer_set::RotamerSetOperationOP rotsetop)core::pack::task::PackerTask_virtual
being_designed(Size resid) const core::pack::task::PackerTask_inlinevirtual
being_packed(Size resid) const core::pack::task::PackerTask_inlinevirtual
bump_check() const core::pack::task::PackerTask_virtual
bump_check_core::pack::task::PackerTask_private
clean_residue_task(conformation::Residue const &original_residue, Size const seqpos)core::pack::task::PackerTask_virtual
clone() const core::pack::task::PackerTask_virtual
decrease_double_lazy_ig_memlimit(Size nbytes_for_rpes)core::pack::task::PackerTask_virtual
decrease_linmem_ig_history_size(Size setting)core::pack::task::PackerTask_virtual
design_any() const core::pack::task::PackerTask_virtual
design_residue(int resid) const core::pack::task::PackerTask_virtual
designing_residues() const core::pack::task::PackerTask_virtual
disallow_quench(bool const &disallow_quench)core::pack::task::PackerTask_virtual
disallow_quench() const core::pack::task::PackerTask_virtual
disallow_quench_core::pack::task::PackerTask_private
dlig_mem_limit_core::pack::task::PackerTask_private
double_lazy_ig() const core::pack::task::PackerTask_virtual
double_lazy_ig_core::pack::task::PackerTask_private
double_lazy_ig_memlimit() const core::pack::task::PackerTask_virtual
has_behavior(std::string const &behavior, Size resid) const core::pack::task::PackerTask_virtual
has_behavior(Size resid) const core::pack::task::PackerTask_virtual
high_temp(Real const &high_temp)core::pack::task::PackerTask_virtual
high_temp() const core::pack::task::PackerTask_virtual
high_temp_core::pack::task::PackerTask_private
IG_edge_reweights_core::pack::task::PackerTask_private
IGEdgeReweights() const core::pack::task::PackerTask_virtual
include_current(Size resid) const core::pack::task::PackerTask_virtual
increase_multi_cool_annealer_history_size(Size setting)core::pack::task::PackerTask_virtual
initialize_extra_rotamer_flags_from_command_line()core::pack::task::PackerTask_virtual
initialize_from_command_line()core::pack::task::PackerTask_virtual
lazy_ig() const core::pack::task::PackerTask_virtual
lazy_ig_core::pack::task::PackerTask_private
linmem_ig() const core::pack::task::PackerTask_virtual
linmem_ig_core::pack::task::PackerTask_private
linmem_ig_history_size() const core::pack::task::PackerTask_virtual
linmem_ig_history_size_core::pack::task::PackerTask_private
linmem_ig_history_size_at_default_core::pack::task::PackerTask_private
low_temp(Real const &low_temp)core::pack::task::PackerTask_virtual
low_temp() const core::pack::task::PackerTask_virtual
low_temp_core::pack::task::PackerTask_private
max_rotbump_energy() const core::pack::task::PackerTask_virtual
max_rotbump_energy_core::pack::task::PackerTask_private
mca_history_size_core::pack::task::PackerTask_private
multi_cool_annealer() const core::pack::task::PackerTask_virtual
multi_cool_annealer_core::pack::task::PackerTask_private
multi_cool_annealer_history_size() const core::pack::task::PackerTask_virtual
n_to_be_packed_core::pack::task::PackerTask_mutableprivate
n_to_be_packed_up_to_date_core::pack::task::PackerTask_mutableprivate
nonconst_residue_task(Size resid)core::pack::task::PackerTask_virtual
nres_core::pack::task::PackerTask_private
num_to_be_packed() const core::pack::task::PackerTask_virtual
operator=(PackerTask const &)core::pack::task::PackerTask_privatevirtual
optimize_H_core::pack::task::PackerTask_private
or_adducts(bool setting)core::pack::task::PackerTask_virtual
or_adducts(bool setting, Size resid)core::pack::task::PackerTask_virtual
or_double_lazy_ig(bool setting)core::pack::task::PackerTask_virtual
or_fix_his_tautomer(utility::vector1< int > const &positions, bool setting)core::pack::task::PackerTask_virtual
or_flip_HNQ(bool setting)core::pack::task::PackerTask_virtual
or_include_current(bool setting)core::pack::task::PackerTask_virtual
or_include_current(bool setting, Size resid)core::pack::task::PackerTask_virtual
or_lazy_ig(bool setting)core::pack::task::PackerTask_virtual
or_linmem_ig(bool setting)core::pack::task::PackerTask_virtual
or_multi_cool_annealer(bool setting)core::pack::task::PackerTask_virtual
or_optimize_h_mode(bool setting)core::pack::task::PackerTask_virtual
or_preserve_c_beta(bool setting)core::pack::task::PackerTask_virtual
pack_residue(int resid) const core::pack::task::PackerTask_virtual
pack_residue_core::pack::task::PackerTask_private
PackerTask_()core::pack::task::PackerTask_
PackerTask_(pose::Pose const &pose)core::pack::task::PackerTask_
remap_residue_level_tasks(core::id::SequenceMappingCOP seqmap, core::pose::Pose const &pose)core::pack::task::PackerTask_virtual
repacking_residues() const core::pack::task::PackerTask_virtual
request_symmetrize_by_intersection()core::pack::task::PackerTask_virtual
request_symmetrize_by_union()core::pack::task::PackerTask_virtual
residue_task(Size resid) const core::pack::task::PackerTask_virtual
residue_tasks_core::pack::task::PackerTask_private
restrict_to_repacking()core::pack::task::PackerTask_virtual
restrict_to_residues(utility::vector1< bool > const &residues_allowed_to_be_packed)core::pack::task::PackerTask_virtual
rotamer_couplings() const core::pack::task::PackerTask_virtual
rotamer_couplings(RotamerCouplingsCOP setting)core::pack::task::PackerTask_virtual
rotamer_couplings_core::pack::task::PackerTask_private
rotamer_couplings_exist() const core::pack::task::PackerTask_virtual
rotamer_links() const core::pack::task::PackerTask_virtual
rotamer_links(RotamerLinksCOP setting)core::pack::task::PackerTask_virtual
rotamer_links_core::pack::task::PackerTask_private
rotamer_links_exist() const core::pack::task::PackerTask_virtual
RotamerCouplingsCOP typedefcore::pack::task::PackerTask
RotamerLinksCOP typedefcore::pack::task::PackerTask
set_bump_check(bool setting)core::pack::task::PackerTask_virtual
set_IGEdgeReweights()core::pack::task::PackerTask_virtual
show(std::ostream &out) const core::pack::task::PackerTask_virtual
show() const core::pack::task::PackerTask_virtual
show_all_residue_tasks(std::ostream &out) const core::pack::task::PackerTask_virtual
show_all_residue_tasks() const core::pack::task::PackerTask_virtual
show_residue_task(std::ostream &out, Size resid) const core::pack::task::PackerTask_virtual
show_residue_task(Size resid) const core::pack::task::PackerTask_virtual
symmetrize_by_intersection() const core::pack::task::PackerTask_virtual
symmetrize_by_union() const core::pack::task::PackerTask_virtual
symmetry_status_core::pack::task::PackerTask_private
target_type(Size resid) const core::pack::task::PackerTask_virtual
task_string(pose::Pose const &pose) const core::pack::task::PackerTask_virtual
temporarily_fix_everything()core::pack::task::PackerTask_virtual
temporarily_set_pack_residue(int resid, bool setting)core::pack::task::PackerTask_virtual
total_residue() const core::pack::task::PackerTask_virtual
update_commutative(PackerTask const &tark_in)core::pack::task::PackerTask_virtual
update_n_to_be_packed() const core::pack::task::PackerTask_private
update_residue_commutative(Size resid, ResidueLevelTask const &res_task_in)core::pack::task::PackerTask_virtual
update_residue_intersection(Size resid, ResidueLevelTask const &res_task_in)core::pack::task::PackerTask_virtual
update_residue_union(Size resid, ResidueLevelTask const &res_task_in)core::pack::task::PackerTask_virtual
~PackerTask()=0core::pack::task::PackerTaskpure virtual
~PackerTask_()core::pack::task::PackerTask_virtual