core::pose::rna::BasePair Class Reference

#include <RNA_BaseDoubletClasses.hh>

Public Member Functions
	BasePair ()
	BasePair (Size const &res1_input, Size const res2_input, Size const &edge1_input, Size const edge2_input, Size const &orientation_input)
void	print_info (std::ostream &out=std::cout) const

Public Attributes
Size	res1
Size	res2
Size	edge1
Size	edge2
Size	orientation
Size	LW_orientation
Size	num_hbonds

Friends
bool	operator< (BasePair const &lhs, BasePair const &rhs)
bool	operator== (BasePair const &lhs, BasePair const &rhs)
std::ostream &	operator<< (std::ostream &out, BasePair const &s)

Constructor & Destructor Documentation

core::pose::rna::BasePair::BasePair ( )

inline

core::pose::rna::BasePair::BasePair ( Size const &  res1_input, Size const  res2_input, Size const &  edge1_input, Size const  edge2_input, Size const &  orientation_input  )

inline

Member Function Documentation

void core::pose::rna::BasePair::print_info ( std::ostream &  out = std::cout ) const

inline

References edge1, edge2, core::chemical::rna::get_full_edge_from_num(), core::chemical::rna::get_full_LW_orientation_from_num(), core::chemical::rna::get_full_orientation_from_num(), LW_orientation, num_hbonds, orientation, out, res1, and res2.

Friends And Related Function Documentation

bool operator< ( BasePair const &  lhs, BasePair const &  rhs  )

friend

std::ostream& operator<< ( std::ostream &  out, BasePair const &  s  )

friend

bool operator== ( BasePair const &  lhs, BasePair const &  rhs  )

friend

Member Data Documentation

Size core::pose::rna::BasePair::edge1

Referenced by core::scoring::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_pairs_to_score(), core::scoring::rna::RNA_FilteredBaseBaseInfo::get_data_score(), core::scoring::rna::data::RNA_DMS_LowResolutionPotential::get_rna_base_pairing_status(), and print_info().

Size core::pose::rna::BasePair::edge2

Referenced by core::scoring::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_pairs_to_score(), core::scoring::rna::RNA_FilteredBaseBaseInfo::get_data_score(), core::scoring::rna::data::RNA_DMS_LowResolutionPotential::get_rna_base_pairing_status(), and print_info().

Size core::pose::rna::BasePair::LW_orientation

Referenced by print_info().

Size core::pose::rna::BasePair::num_hbonds

Referenced by print_info().

Size core::pose::rna::BasePair::orientation

Referenced by core::scoring::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_pairs_to_score(), and print_info().

Size core::pose::rna::BasePair::res1

Referenced by core::scoring::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_pairs_to_score(), core::scoring::rna::RNA_FilteredBaseBaseInfo::get_data_score(), core::scoring::rna::data::RNA_DMS_LowResolutionPotential::get_rna_base_pairing_status(), and print_info().

Size core::pose::rna::BasePair::res2

Referenced by core::scoring::rna::RNA_FilteredBaseBaseInfo::figure_out_rna_base_pairs_to_score(), core::scoring::rna::RNA_FilteredBaseBaseInfo::get_data_score(), core::scoring::rna::data::RNA_DMS_LowResolutionPotential::get_rna_base_pairing_status(), and print_info().

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The documentation for this class was generated from the following file:

• src/core/pose/rna/RNA_BaseDoubletClasses.hh