core::conformation::membrane::LipidAccInfo Class Reference

Membrane Lipid Accessibility Data. More...

#include <LipidAccInfo.hh>

Public Member Functions
	LipidAccInfo ()
	Constructor. More...
	LipidAccInfo (std::string lipsfile)
	Custom Constructor. More...
	LipidAccInfo (LipidAccInfo const &src)
	Conpy Constructor. More...
LipidAccInfo &	operator= (LipidAccInfo const &src)
	Assignment Operator. More...
	~LipidAccInfo ()
	Destructor. More...
utility::vector1< core::Real >	lipid_exposure ()
	Access Lipid exposed surface area per-residue. More...
utility::vector1< core::Real >	lipid_burial ()

Private Member Functions
void	copy_data (LipidAccInfo src, LipidAccInfo copy)
	Copy Data. More...

Private Attributes
utility::vector1< core::Real >	lipid_exposure_
utility::vector1< core::Real >	lipid_burial_

Detailed Description

Membrane Lipid Accessibility Data.

Stores lipid accessibility data derived from OCTOPUS spanning file and psiblast search using run_lips.pl script

Constructor & Destructor Documentation

core::conformation::membrane::LipidAccInfo::LipidAccInfo

(

)

Constructor.

Create a blank copy of the lipid accessibility data object

Referenced by operator=().

core::conformation::membrane::LipidAccInfo::LipidAccInfo

(

std::string

lipsfile

)

Custom Constructor.

Construct from user-provided lipid Acc Info File

References utility::io::izstream::clear(), utility::io::izstream::close(), utility::io::izstream::eof(), getline(), l, lipid_burial_, lipid_exposure_, nres, utility::io::izstream::open(), core::conformation::TR, and utility_exit_with_message.

core::conformation::membrane::LipidAccInfo::LipidAccInfo

(

LipidAccInfo const &

src

)

Conpy Constructor.

Create a deep copy of this object

References copy_data().

core::conformation::membrane::LipidAccInfo::~LipidAccInfo

(

)

Destructor.

Member Function Documentation

void core::conformation::membrane::LipidAccInfo::copy_data ( LipidAccInfo  src, LipidAccInfo  copy  )

private

Copy Data.

References lipid_burial_, and lipid_exposure_.

Referenced by LipidAccInfo().

utility::vector1< core::Real > core::conformation::membrane::LipidAccInfo::lipid_burial

(

)

Access Lipid buried surface area per-residue

References lipid_burial_.

utility::vector1< core::Real > core::conformation::membrane::LipidAccInfo::lipid_exposure

(

)

Access Lipid exposed surface area per-residue.

References lipid_exposure_.

LipidAccInfo & core::conformation::membrane::LipidAccInfo::operator=

(

LipidAccInfo const &

src

)

Assignment Operator.

Create a deep copy of this object, overloading the assignment operator

References LipidAccInfo().

Member Data Documentation

utility::vector1< core::Real > core::conformation::membrane::LipidAccInfo::lipid_burial_

private

Referenced by copy_data(), lipid_burial(), and LipidAccInfo().

utility::vector1< core::Real > core::conformation::membrane::LipidAccInfo::lipid_exposure_

private

Referenced by copy_data(), lipid_exposure(), and LipidAccInfo().

---

The documentation for this class was generated from the following files:

• src/core/conformation/membrane/LipidAccInfo.hh
• src/core/conformation/membrane/LipidAccInfo.cc