Rosetta Core  2014.35

scoring → conformation Relation

File in src/core/scoringIncludes file in src/core/conformation
constraints / AmbiguousConstraint.hhConformation.fwd.hh
constraints / AmbiguousNMRConstraint.hhConformation.fwd.hh
constraints / AmbiguousNMRDistanceConstraint.hhConformation.fwd.hh
constraints / AngleConstraint.ccConformation.hh
APBSWrapper.ccResidue.hh
APBSWrapper.hhResidue.fwd.hh
etable / atom_pair_energy_inline.hhAtom.hh
etable / atom_pair_energy_inline.hhResidue.hh
constraints / AtomPairConstraint.ccConformation.hh
constraints / BackboneStubConstraint.ccResidue.hh
constraints / BackboneStubConstraint.ccResidueFactory.hh
constraints / BackboneStubConstraint.hhResidue.fwd.hh
constraints / BackboneStubLinearConstraint.ccResidue.hh
constraints / BackboneStubLinearConstraint.ccResidueFactory.hh
constraints / BackboneStubLinearConstraint.hhResidue.fwd.hh
dna / base_geometry.ccResidue.hh
dna / base_geometry.hhResidue.fwd.hh
etable / BaseEtableEnergy.hhAtom.hh
etable / BaseEtableEnergy.tmpl.hhAbstractRotamerTrie.fwd.hh
etable / BaseEtableEnergy.tmpl.hhAbstractRotamerTrie.hh
etable / BaseEtableEnergy.tmpl.hhAtom.fwd.hh
etable / BaseEtableEnergy.tmpl.hhAtom.hh
etable / BaseEtableEnergy.tmpl.hhConformation.fwd.hh
etable / BaseEtableEnergy.tmpl.hhConformation.hh
etable / BaseEtableEnergy.tmpl.hhsignals / ConnectionEvent.fwd.hh
etable / BaseEtableEnergy.tmpl.hhsignals / ConnectionEvent.hh
etable / BaseEtableEnergy.tmpl.hhfind_neighbors.fwd.hh
etable / BaseEtableEnergy.tmpl.hhfind_neighbors.hh
etable / BaseEtableEnergy.tmpl.hhsignals / GeneralEvent.fwd.hh
etable / BaseEtableEnergy.tmpl.hhsignals / GeneralEvent.hh
etable / BaseEtableEnergy.tmpl.hhsignals / IdentityEvent.fwd.hh
etable / BaseEtableEnergy.tmpl.hhsignals / IdentityEvent.hh
etable / BaseEtableEnergy.tmpl.hhsignals / LengthEvent.fwd.hh
etable / BaseEtableEnergy.tmpl.hhsignals / LengthEvent.hh
etable / BaseEtableEnergy.tmpl.hhorbitals / OrbitalXYZCoords.hh
etable / BaseEtableEnergy.tmpl.hhPointGraph.fwd.hh
etable / BaseEtableEnergy.tmpl.hhPointGraph.hh
etable / BaseEtableEnergy.tmpl.hhPointGraphData.fwd.hh
etable / BaseEtableEnergy.tmpl.hhPointGraphData.hh
etable / BaseEtableEnergy.tmpl.hhPseudoBond.fwd.hh
etable / BaseEtableEnergy.tmpl.hhResidue.fwd.hh
etable / BaseEtableEnergy.tmpl.hhResidue.hh
etable / BaseEtableEnergy.tmpl.hhRotamerSetBase.fwd.hh
etable / BaseEtableEnergy.tmpl.hhRotamerSetBase.hh
etable / BaseEtableEnergy.tmpl.hhsignals / XYZEvent.fwd.hh
etable / BaseEtableEnergy.tmpl.hhsignals / XYZEvent.hh
memb_etable / BaseMembEtableEnergy.hhAtom.hh
etable / BaseMembEtableEnergy.hhAtom.hh
constraints / BigBinConstraint.hhConformation.fwd.hh
methods / BurialEnergy.ccAtom.hh
methods / BurialEnergy.ccResidue.hh
carbon_hbonds / CarbonHBondEnergy.ccResidue.hh
methods / CartesianBondedEnergy.ccConformation.hh
methods / CartesianBondedEnergy.ccResidue.hh
methods / CartesianBondedEnergy.ccResidueFactory.hh
methods / CartesianBondedEnergy.ccsymmetry / SymmetryInfo.hh
methods / CenHBEnergy.ccResidue.hh
methods / CenPairEnergy.ccConformation.hh
methods / CenPairEnergy.ccResidue.hh
methods / CenRotEnvEnergy.ccResidue.hh
CenRotEnvPairPotential.ccResidue.hh
CenRotEnvPairPotential.hhResidue.fwd.hh
methods / CenRotPairEnergy.ccResidue.hh
disulfides / CentroidDisulfideEnergy.ccResidue.hh
disulfides / CentroidDisulfideEnergyContainer.ccResidue.hh
disulfides / CentroidDisulfidePotential.ccConformation.hh
disulfides / CentroidDisulfidePotential.ccResidue.hh
disulfides / CentroidDisulfidePotential.hhResidue.fwd.hh
methods / chainbreak_util.ccResidue.hh
methods / ChainbreakEnergy.ccResidue.hh
methods / ChainbreakEnergy.ccsymmetry / SymmetricConformation.hh
methods / ChainbreakEnergy.ccsymmetry / SymmetryInfo.hh
ChemicalShiftAnisotropy.ccResidue.hh
methods / ChemicalShiftAnisotropyEnergy.ccResidue.hh
etable / CoarseEtableEnergy.ccAtom.hh
etable / CoarseEtableEnergy.hhAtom.hh
packing / compute_holes_score_res.ccResidue.hh
constraints / ConstantConstraint.hhConformation.fwd.hh
constraints / Constraint.hhConformation.fwd.hh
constraints / Constraints.hhConformation.fwd.hh
constraints / Constraints.hhResidue.fwd.hh
constraints / ConstraintsEnergy.ccResidue.hh
constraints / ConstraintsEnergy.hhResidue.fwd.hh
constraints / ConstraintSet.ccConformation.hh
constraints / ConstraintSet.ccsignals / ConnectionEvent.hh
constraints / ConstraintSet.ccsignals / LengthEvent.hh
constraints / ConstraintSet.hhConformation.fwd.hh
constraints / ConstraintSet.hhsignals / ConnectionEvent.fwd.hh
constraints / ConstraintSet.hhsignals / LengthEvent.fwd.hh
constraints / ConstraintSet.hhResidue.fwd.hh
methods / ContactOrderEnergy.ccResidue.hh
methods / ContextDependentOneBodyEnergy.hhResidue.fwd.hh
methods / ContextDependentTwoBodyEnergy.hhResidue.fwd.hh
geometric_solvation / ContextIndependentGeometricSolEnergy.ccResidue.hh
methods / ContextIndependentOneBodyEnergy.hhResidue.fwd.hh
constraints / CoordinateConstraint.ccConformation.hh
constraints / CoordinateConstraint.hhConformation.fwd.hh
etable / count_pair / CountPair1B.hhAtom.hh
etable / count_pair / CountPair1B.hhResidue.hh
etable / count_pair / CountPairFactory.ccResidue.hh
etable / count_pair / CountPairFactory.hhResidue.fwd.hh
etable / count_pair / CountPairFunction.hhResidue.fwd.hh
etable / count_pair / CountPairGeneric.ccAtom.hh
etable / count_pair / CountPairGeneric.ccPseudoBond.hh
etable / count_pair / CountPairGeneric.ccResidue.hh
etable / count_pair / CountPairIntraRes.hhAtom.hh
etable / count_pair / CountPairIntraRes.hhResidue.hh
etable / count_pair / CountPairIntraResC3.hhAtom.hh
etable / count_pair / CountPairIntraResC4.hhAtom.hh
etable / count_pair / CountPairNone.hhResidue.fwd.hh
trie / CPDataCorrespondence.ccPseudoBond.hh
trie / CPDataCorrespondence.ccResidue.hh
trie / CPDataCorrespondence.ccRotamerSetBase.hh
trie / CPDataCorrespondence.hhResidue.fwd.hh
trie / CPDataCorrespondence.hhRotamerSetBase.fwd.hh
methods / CSD_TorsionEnergy.ccResidue.hh
methods / CustomAtomPairEnergy.ccConformation.hh
methods / CustomAtomPairEnergy.ccResidue.hh
methods / CustomAtomPairEnergy.ccRotamerSetBase.hh
methods / D2H_SA_Energy.ccsymmetry / SymmetricConformation.hh
methods / D2H_SA_Energy.ccsymmetry / SymmetryInfo.hh
interface_ / DDPscore.ccResidue.hh
methods / dfire / DFIRE_Potential.ccResidue.hh
methods / dfire / DFIRE_Potential.hhResidue.fwd.hh
constraints / DihedralConstraint.ccConformation.hh
constraints / DihedralPairConstraint.ccConformation.hh
DipolarCoupling.ccResidue.hh
methods / DipolarCouplingEnergy.ccResidue.hh
methods / DirectReadoutEnergy.ccResidue.hh
methods / DirectReadoutEnergy.hhResidue.fwd.hh
dna / DirectReadoutPotential.ccResidue.hh
dna / DirectReadoutPotential.hhResidue.fwd.hh
methods / DistanceChainbreakEnergy.ccResidue.hh
constraints / DistancePairConstraint.ccConformation.hh
disulfides / DisulfideAtomIndices.ccResidue.hh
disulfides / DisulfideAtomIndices.hhResidue.fwd.hh
disulfides / DisulfideMatchingDatabase.ccAtom.hh
disulfides / DisulfideMatchingDatabase.ccResidue.hh
disulfides / DisulfideMatchingEnergy.ccResidue.hh
disulfides / DisulfideMatchingEnergyContainer.ccResidue.hh
disulfides / DisulfideMatchingPotential.ccAtom.hh
disulfides / DisulfideMatchingPotential.ccConformation.hh
disulfides / DisulfideMatchingPotential.ccResidue.hh
disulfides / DisulfideMatchingPotential.ccutil.hh
disulfides / DisulfideMatchingPotential.hhResidue.fwd.hh
methods / DNA_BaseEnergy.ccResidue.hh
dna / DNA_BasePotential.ccResidue.hh
dna / DNA_BasePotential.hhResidue.fwd.hh
dna / DNABFormPotential.hhResidue.hh
dna / DNATorsionPotential.hhResidue.hh
DockingScoreFunction.ccConformation.hh
DockingScoreFunction.hhsymmetry / SymmetricConformation.fwd.hh
DockingScoreFunction.hhsymmetry / SymmetryInfo.fwd.hh
dssp / Dssp.ccResidue.hh
elec / ElecAtom.ccAtom.hh
elec / ElecAtom.ccResidue.hh
elec / ElecAtom.hhAtom.hh
elec / ElecAtom.hhResidue.fwd.hh
electron_density / ElecDensAllAtomCenEnergy.ccAtom.hh
electron_density / ElecDensAllAtomCenEnergy.ccResidue.hh
electron_density / ElecDensAllAtomCenEnergy.ccsymmetry / SymmetricConformation.hh
electron_density / ElecDensAllAtomCenEnergy.ccsymmetry / SymmetryInfo.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.ccAtom.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.ccResidue.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.hhResidue.fwd.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.hhsymmetry / SymmetryInfo.fwd.hh
electron_density / ElecDensCenEnergy.ccAtom.hh
electron_density / ElecDensCenEnergy.ccResidue.hh
electron_density / ElecDensCenEnergy.ccsymmetry / SymmetricConformation.hh
electron_density / ElecDensCenEnergy.ccsymmetry / SymmetryInfo.hh
electron_density / ElecDensEnergy.ccAtom.hh
electron_density / ElecDensEnergy.ccResidue.hh
electron_density / ElecDensEnergy.ccsymmetry / SymmetricConformation.hh
electron_density / ElecDensEnergy.ccsymmetry / SymmetryInfo.fwd.hh
electron_density / ElecDensEnergy.ccsymmetry / SymmetryInfo.hh
electron_density / ElectronDensity.ccAtom.hh
electron_density / ElectronDensity.ccResidue.hh
electron_density / ElectronDensity.ccsymmetry / SymmetricConformation.hh
electron_density / ElectronDensity.ccsymmetry / SymmetryInfo.hh
electron_density / ElectronDensity.hhAtom.fwd.hh
electron_density / ElectronDensity.hhResidue.fwd.hh
electron_density / ElectronDensity.hhsymmetry / SymmetryInfo.hh
electron_density_atomwise / ElectronDensityAtomwise.ccResidue.hh
electron_density_atomwise / ElectronDensityAtomwise.ccsymmetry / SymmetryInfo.hh
electron_density_atomwise / ElectronDensityAtomwise.hhResidue.fwd.hh
electron_density_atomwise / ElectronDensityAtomwise.hhsymmetry / SymmetryInfo.fwd.hh
Energies.ccfind_neighbors.hh
Energies.ccPointGraph.hh
Energies.ccPointGraphData.hh
Energies.hhPointGraph.fwd.hh
methods / EnergyMethod.hhRotamerSetBase.fwd.hh
methods / EnvEnergy.ccConformation.hh
methods / EnvEnergy.ccResidue.hh
EnvPairPotential.ccResidue.hh
EnvPairPotential.hhResidue.fwd.hh
methods / EnvSmoothEnergy.ccAtom.hh
methods / EnvSmoothEnergy.ccResidue.hh
methods / EnvSmoothEnergy.ccsymmetry / SymmetricConformation.hh
methods / EnvSmoothEnergy.ccsymmetry / SymmetryInfo.hh
methods / EnvSmoothEnergy.hhAtom.fwd.hh
etable / Etable.hhAtom.hh
etable / etrie / EtableAtom.ccAtom.hh
etable / etrie / EtableAtom.ccResidue.hh
etable / etrie / EtableAtom.hhAtom.hh
etable / etrie / EtableAtom.hhResidue.fwd.hh
geometric_solvation / ExactOccludedHbondSolEnergy.ccAtom.hh
geometric_solvation / ExactOccludedHbondSolEnergy.ccResidue.hh
elec / FA_ElecEnergy.ccRotamerSetBase.hh
elec / FA_ElecEnergyAroAll.ccResidue.hh
elec / FA_ElecEnergyAroAll.ccRotamerSetBase.hh
elec / FA_ElecEnergyAroAro.ccResidue.hh
elec / FA_ElecEnergyAroAro.ccRotamerSetBase.hh
methods / Fa_MbenvEnergy.ccResidue.hh
methods / Fa_MbenvEnergy.hhAtom.fwd.hh
methods / Fa_MbsolvEnergy.ccResidue.hh
methods / Fa_MbsolvEnergy.hhAtom.fwd.hh
constraints / FabConstraint.ccConformation.hh
constraints / FabConstraint.ccResidue.hh
constraints / FabConstraint.hhConformation.fwd.hh
facts / FACTSEnergy.ccRotamerSetBase.hh
facts / FACTSEnergy.ccRotamerSetCacheableDataType.hh
facts / FACTSEnergy.hhRotamerSetBase.hh
facts / FACTSPose.ccResidue.hh
facts / FACTSPose.ccResidueFactory.hh
facts / FACTSPose.ccRotamerSetBase.hh
facts / FACTSPose.ccRotamerSetCacheableDataType.hh
facts / FACTSPose.hhResidue.hh
facts / FACTSPose.hhRotamerSetBase.hh
facts / FACTSPotential.ccResidue.hh
facts / FACTSPotential.ccResidueFactory.hh
facts / FACTSPotential.ccRotamerSetBase.hh
facts / FACTSPotential.ccRotamerSetCacheableDataType.hh
facts / FACTSPotential.hhResidue.hh
facts / FACTSPotential.hhRotamerSetBase.hh
facts / FACTSResidue.ccResidue.fwd.hh
facts / FACTSResidue.ccResidue.hh
facts / FACTSResidue.ccResidueFactory.hh
facts / FACTSResidue.ccRotamerSetBase.hh
facts / FACTSResidue.ccRotamerSetCacheableDataType.hh
facts / FACTSResidue.hhResidue.hh
facts / FACTSResidue.hhRotamerSetBase.hh
membrane / FaMPEnvEnergy.ccConformation.hh
membrane / FaMPEnvEnergy.ccmembrane / MembraneInfo.hh
membrane / FaMPEnvEnergy.ccResidue.hh
membrane / FaMPEnvEnergy.ccmembrane / SpanningTopology.hh
membrane / FaMPEnvEnergy.hhAtom.fwd.hh
membrane / FaMPEnvEnergy.hhConformation.fwd.hh
membrane / FaMPEnvEnergy.hhmembrane / SpanningTopology.fwd.hh
membrane / FaMPEnvSmoothEnergy.ccAtom.hh
membrane / FaMPEnvSmoothEnergy.ccConformation.hh
membrane / FaMPEnvSmoothEnergy.ccmembrane / MembraneInfo.hh
membrane / FaMPEnvSmoothEnergy.ccResidue.hh
membrane / FaMPEnvSmoothEnergy.hhAtom.fwd.hh
membrane / FaMPSolvEnergy.ccAtom.hh
membrane / FaMPSolvEnergy.ccConformation.hh
membrane / FaMPSolvEnergy.ccmembrane / MembraneInfo.hh
membrane / FaMPSolvEnergy.ccResidue.hh
membrane / FaMPSolvEnergy.ccmembrane / SpanningTopology.hh
membrane / FaMPSolvEnergy.fwd.hhAtom.hh
membrane / FaMPSolvEnergy.fwd.hhConformation.hh
membrane / FaMPSolvEnergy.fwd.hhmembrane / SpanningTopology.hh
membrane / FaMPSolvEnergy.hhAtom.fwd.hh
membrane / FaMPSolvEnergy.hhConformation.hh
membrane / FaMPSolvEnergy.hhmembrane / SpanningTopology.fwd.hh
electron_density / FastDensEnergy.ccAtom.hh
electron_density / FastDensEnergy.ccResidue.hh
electron_density / FastDensEnergy.ccsymmetry / SymmetricConformation.hh
electron_density / FastDensEnergy.ccsymmetry / SymmetryInfo.fwd.hh
electron_density / FastDensEnergy.ccsymmetry / SymmetryInfo.hh
saxs / FastSAXSEnergy.ccResidue.hh
func / FourPointsFunc.ccResidue.hh
methods / FreeMoietyEnergy.ccResidue.hh
methods / FreeResidueBonusEnergy.ccResidue.hh
custom_pair_distance / FullatomCustomPairDistanceEnergy.ccResidue.hh
disulfides / FullatomDisulfideEnergy.ccConformation.hh
disulfides / FullatomDisulfideEnergy.ccResidue.hh
disulfides / FullatomDisulfideEnergyContainer.ccResidue.hh
disulfides / FullatomDisulfideEnergyContainer.ccsymmetry / SymmetryInfo.hh
disulfides / FullatomDisulfidePotential.ccResidue.hh
disulfides / FullatomDisulfidePotential.hhResidue.fwd.hh
methods / GaussianOverlapEnergy.ccResidue.hh
methods / GenBornEnergy.ccRotamerSetBase.hh
methods / GenBornEnergy.ccRotamerSetCacheableDataType.hh
GenBornPotential.ccResidue.hh
GenBornPotential.ccResidueFactory.hh
GenBornPotential.ccRotamerSetBase.hh
GenBornPotential.ccRotamerSetCacheableDataType.hh
GenBornPotential.hhResidue.hh
GenBornPotential.hhRotamerSetBase.fwd.hh
geometric_solvation / GeometricSolEnergyEvaluator.ccResidue.hh
geometric_solvation / GeometricSolEnergyEvaluator.hhResidue.fwd.hh
methods / GoapEnergy.ccResidue.hh
hackaro / HackAroEnergy.ccResidue.hh
hbonds / HBEvalTuple.ccResidue.hh
hbonds / HBEvalTuple.hhResidue.fwd.hh
hbonds / HBondEnergy.ccConformation.hh
hbonds / HBondEnergy.ccmembrane / MembraneInfo.hh
hbonds / HBondEnergy.ccResidue.hh
hbonds / HBondEnergy.ccRotamerSetBase.hh
hbonds / hbonds.ccResidue.hh
hbonds / hbonds.hhResidue.fwd.hh
hbonds / hbonds_geom.ccResidue.hh
hbonds / hbonds_geom.hhResidue.fwd.hh
hbonds / HBondSet.ccResidue.hh
hbonds / HBondSet.hhResidue.fwd.hh
methods / HybridVDW_Energy.ccResidue.hh
constraints / KofNConstraint.ccConformation.fwd.hh
constraints / KofNConstraint.hhConformation.fwd.hh
sasa / LeGrandSasa.ccResidue.hh
sasa / LeGrandSasa.hhResidue.fwd.hh
methods / LinearChainbreakEnergy.ccConformation.hh
methods / LinearChainbreakEnergy.ccResidue.hh
methods / LinearChainbreakEnergy.hhResidue.fwd.hh
methods / LK_BallEnergy.ccResidue.hh
methods / LK_BallEnergy.ccResidueFactory.hh
methods / LK_BallEnergy.ccRotamerSetBase.hh
methods / LK_BallEnergy.ccRotamerSetCacheableDataType.hh
methods / LK_BallEnergy.hhAtom.fwd.hh
methods / LK_BallEnergy.hhRotamerSetBase.fwd.hh
methods / LK_BallInfo.ccResidue.hh
methods / LK_BallInfo.ccResidueFactory.hh
methods / LK_BallInfo.hhResidue.hh
methods / LK_hack.ccResidue.hh
methods / LK_hack.hhAtom.fwd.hh
methods / LK_PolarNonPolarEnergy.ccResidue.hh
methods / LK_PolarNonPolarEnergy.hhAtom.fwd.hh
constraints / LocalCoordinateConstraint.ccConformation.hh
constraints / LocalCoordinateConstraint.hhResidue.hh
loop_graph / LoopCloseEnergy.ccResidue.hh
loop_graph / LoopCloseEnergy.hhResidue.fwd.hh
loop_graph / LoopGraph.ccResidue.hh
Membrane_FAPotential.ccResidue.hh
Membrane_FAPotential.hhResidue.hh
methods / MembraneCbetaEnergy.ccResidue.hh
methods / MembraneCenPairEnergy.ccResidue.hh
methods / MembraneCenPairEnergy.ccsymmetry / SymmetricConformation.hh
methods / MembraneCenPairEnergy.ccsymmetry / SymmetryInfo.hh
methods / MembraneEnvEnergy.ccResidue.hh
methods / MembraneEnvSmoothEnergy.ccAtom.hh
methods / MembraneEnvSmoothEnergy.ccResidue.hh
methods / MembraneEnvSmoothEnergy.hhAtom.fwd.hh
methods / MembraneLipo.ccsymmetry / SymmetricConformation.hh
methods / MembraneLipo.ccsymmetry / SymmetryInfo.hh
MembranePotential.ccConformation.hh
MembranePotential.ccResidue.hh
MembranePotential.ccResidueFactory.hh
MembranePotential.ccsymmetry / SymmetricConformation.hh
MembranePotential.ccsymmetry / SymmetryInfo.hh
MembranePotential.hhResidue.hh
methods / MetalloPlacementEnergy.ccsymmetry / util.hh
MinimizationGraph.hhResidue.fwd.hh
MinScoreScoreFunction.ccConformation.hh
MinScoreScoreFunction.hhsymmetry / SymmetricConformation.fwd.hh
MinScoreScoreFunction.hhsymmetry / SymmetryInfo.fwd.hh
methods / MMBondAngleEnergy.ccResidue.hh
mm / MMBondAngleResidueTypeParamSet.ccConformation.hh
mm / MMBondAngleResidueTypeParamSet.hhConformation.fwd.hh
methods / MMBondLengthEnergy.ccResidue.hh
mm / mmtrie / MMEnergyTableAtom.ccAtom.hh
mm / mmtrie / MMEnergyTableAtom.ccResidue.hh
mm / mmtrie / MMEnergyTableAtom.hhAtom.hh
mm / mmtrie / MMEnergyTableAtom.hhResidue.fwd.hh
methods / MMLJEnergyInter.ccResidue.hh
methods / MMLJEnergyInter.ccRotamerSetBase.hh
methods / MMLJEnergyIntra.ccResidue.hh
methods / MMTorsionEnergy.ccResidue.hh
sc / MolecularSurfaceCalculator.ccResidue.hh
sc / MolecularSurfaceCalculator.hhResidue.fwd.hh
membrane / MPCBetaEnergy.ccConformation.hh
membrane / MPCBetaEnergy.ccmembrane / MembraneInfo.hh
membrane / MPCBetaEnergy.ccResidue.hh
membrane / MPCBetaEnergy.ccmembrane / SpanningTopology.hh
membrane / MPCBetaEnergy.hhConformation.hh
membrane / MPEnvEnergy.ccConformation.hh
membrane / MPEnvEnergy.ccmembrane / MembraneInfo.hh
membrane / MPEnvEnergy.ccResidue.hh
membrane / MPEnvEnergy.ccmembrane / SpanningTopology.hh
membrane / MPEnvEnergy.hhConformation.fwd.hh
membrane / MPEnvEnergy.hhResidue.fwd.hh
membrane / MPEnvEnergy.hhmembrane / SpanningTopology.fwd.hh
membrane / MPLipoEnergy.ccConformation.hh
membrane / MPLipoEnergy.ccmembrane / LipidAccInfo.hh
membrane / MPLipoEnergy.ccmembrane / MembraneInfo.hh
membrane / MPLipoEnergy.ccmembrane / SpanningTopology.hh
membrane / MPNonHelixPenalty.ccConformation.hh
membrane / MPNonHelixPenalty.ccmembrane / MembraneInfo.hh
membrane / MPNonHelixPenalty.ccResidue.hh
membrane / MPNonHelixPenalty.ccmembrane / Span.hh
membrane / MPNonHelixPenalty.ccmembrane / SpanningTopology.hh
membrane / MPNonHelixPenalty.ccsymmetry / SymmetricConformation.hh
membrane / MPNonHelixPenalty.ccsymmetry / SymmetryInfo.hh
membrane / MPNonHelixPenalty.hhmembrane / Span.fwd.hh
membrane / MPPairEnergy.ccConformation.hh
membrane / MPPairEnergy.ccmembrane / MembraneInfo.hh
membrane / MPPairEnergy.ccResidue.hh
membrane / MPPairEnergy.ccmembrane / SpanningTopology.hh
membrane / MPPairEnergy.ccsymmetry / SymmetricConformation.hh
membrane / MPPairEnergy.ccsymmetry / SymmetryInfo.hh
membrane / MPSecStructPenalty.ccConformation.hh
membrane / MPSecStructPenalty.ccResidue.hh
membrane / MPSecStructPenalty.ccmembrane / SpanningTopology.hh
membrane / MPTerminiPenalty.ccConformation.hh
membrane / MPTerminiPenalty.ccmembrane / MembraneInfo.hh
membrane / MPTerminiPenalty.ccResidue.hh
membrane / MPTMProjPenalty.ccConformation.hh
membrane / MPTMProjPenalty.ccmembrane / MembraneInfo.hh
membrane / MPTMProjPenalty.ccResidue.hh
membrane / MPTMProjPenalty.ccmembrane / Span.hh
membrane / MPTMProjPenalty.ccmembrane / SpanningTopology.hh
membrane / MPTMProjPenalty.ccsymmetry / SymmetricConformation.hh
membrane / MPTMProjPenalty.ccsymmetry / SymmetryInfo.hh
membrane / MPTMProjPenalty.hhmembrane / Span.fwd.hh
constraints / MultiConstraint.hhConformation.fwd.hh
constraints / NamedAtomPairConstraint.ccResidue.hh
NeighborList.ccResidue.hh
NeighborList.tmpl.hhAtom.fwd.hh
NeighborList.tmpl.hhAtom.hh
NeighborList.tmpl.hhConformation.fwd.hh
NeighborList.tmpl.hhConformation.hh
NeighborList.tmpl.hhsignals / ConnectionEvent.fwd.hh
NeighborList.tmpl.hhsignals / ConnectionEvent.hh
NeighborList.tmpl.hhfind_neighbors.fwd.hh
NeighborList.tmpl.hhfind_neighbors.hh
NeighborList.tmpl.hhsignals / GeneralEvent.fwd.hh
NeighborList.tmpl.hhsignals / GeneralEvent.hh
NeighborList.tmpl.hhsignals / IdentityEvent.fwd.hh
NeighborList.tmpl.hhsignals / IdentityEvent.hh
NeighborList.tmpl.hhsignals / LengthEvent.fwd.hh
NeighborList.tmpl.hhsignals / LengthEvent.hh
NeighborList.tmpl.hhorbitals / OrbitalXYZCoords.hh
NeighborList.tmpl.hhPointGraph.fwd.hh
NeighborList.tmpl.hhPointGraph.hh
NeighborList.tmpl.hhPointGraphData.fwd.hh
NeighborList.tmpl.hhPointGraphData.hh
NeighborList.tmpl.hhPseudoBond.fwd.hh
NeighborList.tmpl.hhResidue.fwd.hh
NeighborList.tmpl.hhResidue.hh
NeighborList.tmpl.hhRotamerSetBase.fwd.hh
NeighborList.tmpl.hhsignals / XYZEvent.fwd.hh
NeighborList.tmpl.hhsignals / XYZEvent.hh
methods / NMerPSSMEnergy.ccConformation.hh
methods / NMerPSSMEnergy.ccResidue.hh
methods / NMerRefEnergy.ccResidue.hh
methods / NMerSVMEnergy.ccConformation.hh
methods / NMerSVMEnergy.ccResidue.hh
geometric_solvation / non_scorefxn_exact_model.ccAtom.hh
geometric_solvation / non_scorefxn_exact_model.ccResidue.hh
constraints / NonResidueTypeConstraint.ccResidue.hh
constraints / NonResidueTypeConstraint.hhConformation.fwd.hh
nv / NVscore.ccResidue.hh
geometric_solvation / OccludedHbondSolEnergy.ccResidue.hh
geometric_solvation / OccludedHbondSolEnergy_onebody.ccResidue.hh
OmegaTether.ccResidue.hh
OmegaTether.hhResidue.fwd.hh
methods / OmegaTetherEnergy.ccResidue.hh
methods / OneBodyEnergy.hhResidue.fwd.hh
orbitals / OrbitalsAssigned.ccResidue.hh
orbitals / OrbitalsAssigned.hhResidue.fwd.hh
orbitals / OrbitalsScore.ccConformation.hh
orbitals / OrbitalsScore.ccResidue.hh
orbitals / OrbitalsScore.ccRotamerSetBase.hh
orbitals / OrbitalsStatistics.ccResidue.hh
P_AA.ccResidue.hh
P_AA.hhResidue.fwd.hh
methods / P_AA_Energy.hhResidue.fwd.hh
methods / P_AA_pp_Energy.ccResidue.hh
methods / P_AA_pp_Energy.hhResidue.fwd.hh
methods / PairEnergy.ccResidue.hh
methods / PairEnergy.ccRotamerSetBase.hh
PairEPotential.ccResidue.hh
PairEPotential.hhResidue.fwd.hh
electron_density / PattersonCorrEnergy.ccAtom.hh
electron_density / PattersonCorrEnergy.ccResidue.hh
electron_density / PattersonCorrEnergy.ccsymmetry / SymmetricConformation.hh
electron_density / PattersonCorrEnergy.ccsymmetry / SymmetryInfo.fwd.hh
methods / PeptideBondEnergy.ccResidue.hh
methods / pHEnergy.ccResidue.hh
cryst / PhenixInterface.ccResidue.hh
cryst / PhenixInterface.ccResidueFactory.hh
cryst / PhenixInterface.ccsymmetry / SymmetricConformation.hh
cryst / PhenixInterface.ccsymmetry / SymmetryInfo.hh
cryst / PhenixInterface.ccutil.hh
cryst / PhenixInterface.hhResidue.fwd.hh
methods / PoissonBoltzmannEnergy.ccResidue.hh
PoissonBoltzmannPotential.ccResidue.hh
PoissonBoltzmannPotential.hhResidue.fwd.hh
methods / ProClosureEnergy.ccResidue.hh
methods / ProQ_Energy.ccsymmetry / SymmetricConformation.hh
methods / ProQ_Energy.ccsymmetry / SymmetryInfo.hh
methods / ProQ_Energy.hhResidue.hh
ProQPotential.ccConformation.hh
ProQPotential.ccResidue.hh
ProQPotential.ccsymmetry / SymmetricConformation.hh
ProQPotential.ccsymmetry / SymmetryInfo.hh
Rama2BOffset.ccResidue.hh
Rama2BOffset.hhResidue.fwd.hh
methods / Rama2BOffsetEnergy.ccConformation.hh
methods / Rama2BOffsetEnergy.ccResidue.hh
methods / Rama2BOffsetEnergy.ccResidueFactory.hh
methods / Rama2BOffsetEnergy.ccsymmetry / SymmetryInfo.hh
Ramachandran.ccppo_torsion_bin.hh
Ramachandran.ccResidue.hh
Ramachandran.ccutil.hh
Ramachandran.hhppo_torsion_bin.fwd.hh
Ramachandran.hhResidue.fwd.hh
Ramachandran2B.ccppo_torsion_bin.hh
Ramachandran2B.ccResidue.hh
Ramachandran2B.hhppo_torsion_bin.fwd.hh
Ramachandran2B.hhResidue.fwd.hh
methods / RamachandranEnergy.ccResidue.hh
methods / RamachandranEnergy2B.ccResidue.hh
methods / ReferenceEnergy.ccResidue.hh
methods / ReferenceEnergyNoncanonical.ccResidue.hh
ResidualDipolarCoupling.ccResidue.hh
methods / ResidualDipolarCouplingEnergy.ccResidue.hh
methods / ResidualDipolarCouplingEnergy_Rohl.ccResidue.hh
methods / ResidualDipolarCouplingEnergyRigidSegments.ccResidue.hh
ResidueNeighborList.ccAtom.hh
ResidueNeighborList.ccResidue.hh
ResidueNeighborList.hhResidue.fwd.hh
constraints / ResidueTypeConstraint.ccResidue.hh
constraints / ResidueTypeConstraint.hhConformation.fwd.hh
constraints / ResidueTypeLinkingConstraint.ccResidue.hh
constraints / ResidueTypeLinkingConstraint.hhConformation.fwd.hh
methods / RG_Energy.ccAtom.hh
methods / RG_Energy.ccResidue.hh
methods / RG_Energy_Fast.ccAtom.hh
methods / RG_Energy_Fast.ccResidue.hh
methods / RG_Energy_Fast.ccsymmetry / SymmetricConformation.hh
methods / RG_Energy_Fast.ccsymmetry / SymmetryInfo.fwd.hh
methods / RG_Energy_Fast.ccsymmetry / SymmetryInfo.hh
rna / RG_Energy_RNA.ccAtom.hh
rna / RG_Energy_RNA.ccResidue.hh
methods / RG_LocalEnergy.ccAtom.hh
methods / RG_LocalEnergy.ccResidue.hh
rms_util.ccResidue.hh
rms_util.ccsymmetry / SymmetricConformation.hh
rms_util.ccsymmetry / SymmetryInfo.hh
rms_util.hhResidue.fwd.hh
rms_util.tmpl.hhAtom.fwd.hh
rms_util.tmpl.hhAtom.hh
rms_util.tmpl.hhConformation.fwd.hh
rms_util.tmpl.hhConformation.hh
rms_util.tmpl.hhsignals / ConnectionEvent.fwd.hh
rms_util.tmpl.hhsignals / ConnectionEvent.hh
rms_util.tmpl.hhsignals / GeneralEvent.fwd.hh
rms_util.tmpl.hhsignals / GeneralEvent.hh
rms_util.tmpl.hhsignals / IdentityEvent.fwd.hh
rms_util.tmpl.hhsignals / IdentityEvent.hh
rms_util.tmpl.hhsignals / LengthEvent.fwd.hh
rms_util.tmpl.hhsignals / LengthEvent.hh
rms_util.tmpl.hhorbitals / OrbitalXYZCoords.hh
rms_util.tmpl.hhPseudoBond.fwd.hh
rms_util.tmpl.hhResidue.fwd.hh
rms_util.tmpl.hhResidue.hh
rms_util.tmpl.hhsymmetry / SymDof.fwd.hh
rms_util.tmpl.hhsymmetry / SymmData.fwd.hh
rms_util.tmpl.hhsymmetry / SymmetricConformation.fwd.hh
rms_util.tmpl.hhsymmetry / SymmetricConformation.hh
rms_util.tmpl.hhsymmetry / SymmetryInfo.fwd.hh
rms_util.tmpl.hhsymmetry / SymmetryInfo.hh
rms_util.tmpl.hhsymmetry / SymSlideInfo.fwd.hh
rms_util.tmpl.hhsymmetry / SymSlideInfo.hh
rms_util.tmpl.hhsignals / XYZEvent.fwd.hh
rms_util.tmpl.hhsignals / XYZEvent.hh
rna / RNA_BaseBaseEnergy.ccResidue.hh
rna / RNA_BulgeEnergy.ccResidue.hh
rna / RNA_CentroidInfo.ccResidue.hh
rna / RNA_CentroidInfo.hhResidue.fwd.hh
rna / data / RNA_ChemicalMappingEnergy.ccResidue.hh
rna / chemical_shift / RNA_ChemicalShiftEnergy.ccAtom.hh
rna / chemical_shift / RNA_ChemicalShiftEnergy.ccResidue.hh
rna / chemical_shift / RNA_ChemicalShiftPotential.ccAtom.hh
rna / chemical_shift / RNA_ChemicalShiftPotential.ccResidue.hh
rna / chemical_shift / RNA_CS_MagneticAnisotropy.hhResidue.hh
rna / chemical_shift / RNA_CS_Parameters.hhResidue.hh
rna / chemical_shift / RNA_CS_RingCurrent.hhResidue.hh
rna / chemical_shift / RNA_CS_Util.hhResidue.hh
rna / data / RNA_DataBackboneEnergy.ccResidue.hh
rna / data / RNA_DMS_Potential.ccResidue.hh
rna / data / RNA_DMS_Potential.ccResidueFactory.hh
rna / data / RNA_DMS_Potential.hhResidue.fwd.hh
elec / RNA_FA_ElecEnergy.ccResidue.hh
elec / RNA_FA_ElecEnergy.ccRotamerSetBase.hh
rna / RNA_FullAtomStackingEnergy.ccResidue.hh
rna / RNA_FullAtomVDW_BasePhosphate.ccResidue.hh
rna / RNA_JR_SuiteEnergy.ccResidue.hh
rna / RNA_JR_SuiteEnergy.hhAtom.fwd.hh
rna / RNA_LJ_BaseEnergy.ccResidue.hh
rna / RNA_LJ_BaseEnergy.hhAtom.fwd.hh
rna / RNA_LowResolutionPotential.ccResidue.hh
rna / RNA_LowResolutionPotential.ccResidueFactory.hh
rna / RNA_LowResolutionPotential.hhResidue.fwd.hh
rna / RNA_Mg_Energy.ccResidue.hh
rna / RNA_Mg_Energy.hhResidue.fwd.hh
rna / RNA_Mg_KnowledgeBasedPotential.ccResidue.hh
rna / RNA_Mg_KnowledgeBasedPotential.hhResidue.fwd.hh
rna / RNA_PairwiseLowResolutionEnergy.ccResidue.hh
rna / RNA_ScoringInfo.hhResidue.fwd.hh
rna / RNA_SugarCloseEnergy.ccResidue.hh
rna / RNA_SuiteEnergy.ccConformation.hh
rna / RNA_SuiteEnergy.ccResidue.hh
rna / RNA_SuiteEnergy.ccsymmetry / SymmetryInfo.hh
rna / RNA_SuitePotential.ccResidue.hh
rna / RNA_SuitePotential.hhResidue.fwd.hh
rna / RNA_TorsionPotential.ccConformation.hh
rna / RNA_TorsionPotential.hhResidue.fwd.hh
rna / RNA_VDW_Energy.ccResidue.hh
trie / RotamerTrieBase.hhAbstractRotamerTrie.hh
sasa.ccResidue.hh
sasa.hhResidue.fwd.hh
saxs / SAXSEnergy.ccResidue.hh
saxs / SAXSEnergyFA.hhRotamerSetBase.fwd.hh
ScoreFunction.ccResidue.hh
ScoreFunction.hhResidue.fwd.hh
ScoreFunction.hhRotamerSetBase.fwd.hh
dna / scoring.hhResidue.fwd.hh
SecondaryStructurePotential.ccConformation.hh
SecondaryStructurePotential.ccResidue.hh
SecondaryStructurePotential.ccsymmetry / SymmetricConformation.hh
SecondaryStructurePotential.ccsymmetry / SymmetryInfo.hh
SecondaryStructurePotential.hhsymmetry / SymmetricConformation.fwd.hh
SecondaryStructurePotential.hhsymmetry / SymmetryInfo.fwd.hh
methods / SequenceDependentRefEnergy.ccResidue.hh
constraints / SequenceProfileConstraint.ccResidue.hh
dna / setup.ccResidue.hh
sc / ShapeComplementarityCalculator.ccResidue.hh
sc / ShapeComplementarityCalculator.hhResidue.fwd.hh
methods / ShortRangeTwoBodyEnergy.ccResidue.hh
methods / ShortRangeTwoBodyEnergy.ccRotamerSetBase.hh
constraints / SiteConstraint.ccConformation.hh
constraints / SiteConstraint.hhConformation.fwd.hh
constraints / SiteConstraintResidues.ccConformation.hh
constraints / SiteConstraintResidues.hhConformation.fwd.hh
methods / SmoothCenPairEnergy.ccResidue.hh
methods / SmoothEnvEnergy.ccResidue.hh
SmoothEnvPairPotential.ccResidue.hh
SmoothEnvPairPotential.hhResidue.fwd.hh
SS_Info.ccResidue.hh
rna / StackElecEnergy.ccResidue.hh
methods / SuckerEnergy.ccResidue.hh
solid_surface / SurfaceEnergies.ccfind_neighbors.hh
solid_surface / SurfaceEnergies.ccPointGraph.hh
solid_surface / SurfaceEnergies.hhfind_neighbors.fwd.hh
sym_e / symE.ccResidue.hh
symmetry / SymmetricEnergies.ccConformation.hh
symmetry / SymmetricEnergies.ccfind_neighbors.hh
symmetry / SymmetricEnergies.ccPointGraph.hh
symmetry / SymmetricEnergies.ccPointGraphData.hh
symmetry / SymmetricEnergies.ccsymmetry / SymmetricConformation.hh
symmetry / SymmetricEnergies.ccsymmetry / SymmetryInfo.hh
symmetry / SymmetricEnergies.hhPointGraph.fwd.hh
symmetry / SymmetricEnergies.hhsymmetry / SymmetricConformation.fwd.hh
symmetry / SymmetricEnergies.hhsymmetry / SymmetryInfo.fwd.hh
methods / SymmetricLigandEnergy.ccResidue.hh
symmetry / SymmetricScoreFunction.ccsymmetry / SymmetricConformation.hh
symmetry / SymmetricScoreFunction.ccsymmetry / SymmetryInfo.hh
symmetry / SymmetricScoreFunction.hhsymmetry / SymmetricConformation.fwd.hh
symmetry / SymmetricScoreFunction.hhsymmetry / SymmetryInfo.fwd.hh
TMscore.hhResidue.fwd.hh
trie / trie.functions.fwd.hhResidue.fwd.hh
trie / trie.functions.fwd.hhRotamerSetBase.fwd.hh
trie / trie.functions.hhResidue.hh
trie / trie.functions.hhRotamerSetBase.hh
etable / etrie / TrieCountPairGeneric.ccPseudoBond.hh
etable / etrie / TrieCountPairGeneric.ccResidue.hh
methods / TwoBodyEnergy.ccResidue.hh
methods / TwoBodyEnergy.ccRotamerSetBase.hh
methods / TwoBodyEnergy.hhResidue.fwd.hh
methods / TwoBodyEnergy.hhRotamerSetBase.fwd.hh
methods / UnfoldedStateEnergy.ccResidue.hh
UnfoldedStatePotential.ccResidue.hh
util.ccResidue.hh
sasa / util.ccResidue.hh
methods / util.ccResidue.hh
electron_density / util.ccResidue.hh
cryst / util.ccResidue.hh
constraints / util.ccResidue.hh
util.hhResidue.fwd.hh
sasa / util.hhResidue.fwd.hh
methods / util.hhResidue.fwd.hh
vdwaals / VDW_Energy.ccResidue.hh
vdwaals / VDWTrie.ccResidue.hh
vdwaals / VDWTrie.hhResidue.hh
methods / WaterAdductHBondEnergy.hhResidue.fwd.hh
WaterAdductHBondPotential.ccResidue.hh
WaterAdductHBondPotential.hhResidue.fwd.hh
methods / WaterAdductIntraEnergy.ccResidue.hh
cryst / XtalMLEnergy.ccResidue.hh
func / XYZ_Func.ccConformation.hh
func / XYZ_Func.ccResidue.hh
func / XYZ_Func.hhConformation.fwd.hh
func / XYZ_Func.hhResidue.fwd.hh
methods / YHHPlanarityEnergy.ccResidue.hh
methods / YHHPlanarityEnergy.hhResidue.fwd.hh