Rosetta Core  2014.35

scoring → id Relation

File in src/core/scoringIncludes file in src/core/id
constraints / AmbiguousConstraint.hhAtomID.hh
constraints / AmbiguousConstraint.hhSequenceMapping.fwd.hh
constraints / AmbiguousNMRConstraint.hhAtomID.hh
constraints / AmbiguousNMRDistanceConstraint.ccAtomID.hh
constraints / AmbiguousNMRDistanceConstraint.ccNamedAtomID.hh
constraints / AmbiguousNMRDistanceConstraint.ccSequenceMapping.hh
constraints / AmbiguousNMRDistanceConstraint.hhAtomID.hh
constraints / AmbiguousNMRDistanceConstraint.hhNamedAtomID.hh
constraints / AngleConstraint.ccAtomID.hh
constraints / AngleConstraint.ccNamedAtomID.hh
constraints / AngleConstraint.ccSequenceMapping.hh
constraints / AngleConstraint.hhAtomID.fwd.hh
constraints / AngleConstraint.hhAtomID.hh
constraints / AtomPairConstraint.ccAtomID.hh
constraints / AtomPairConstraint.ccNamedAtomID.hh
constraints / AtomPairConstraint.ccSequenceMapping.hh
constraints / AtomPairConstraint.hhAtomID.hh
constraints / BackboneStubConstraint.ccSequenceMapping.hh
constraints / BackboneStubLinearConstraint.ccSequenceMapping.hh
etable / BaseEtableEnergy.tmpl.hhAtomID.fwd.hh
etable / BaseEtableEnergy.tmpl.hhAtomID.hh
etable / BaseEtableEnergy.tmpl.hhAtomID_Map.fwd.hh
etable / BaseEtableEnergy.tmpl.hhAtomID_Map.hh
etable / BaseEtableEnergy.tmpl.hhAtomID_Mask.fwd.hh
etable / BaseEtableEnergy.tmpl.hhDOF_ID.fwd.hh
etable / BaseEtableEnergy.tmpl.hhDOF_ID.hh
etable / BaseEtableEnergy.tmpl.hhDOF_ID_Map.fwd.hh
etable / BaseEtableEnergy.tmpl.hhDOF_ID_Map.hh
etable / BaseEtableEnergy.tmpl.hhDOF_ID_Mask.fwd.hh
etable / BaseEtableEnergy.tmpl.hhNamedAtomID.fwd.hh
etable / BaseEtableEnergy.tmpl.hhNamedAtomID.hh
etable / BaseEtableEnergy.tmpl.hhNamedStubID.fwd.hh
etable / BaseEtableEnergy.tmpl.hhSequenceMapping.fwd.hh
etable / BaseEtableEnergy.tmpl.hhTorsionID.fwd.hh
etable / BaseEtableEnergy.tmpl.hhTorsionID.hh
etable / BaseEtableEnergy.tmpl.hhtypes.hh
constraints / BigBinConstraint.hhAtomID.hh
methods / CartesianBondedEnergy.ccDOF_ID.hh
methods / CartesianBondedEnergy.ccTorsionID.hh
methods / ChainbreakEnergy.ccAtomID.hh
methods / ChemicalShiftAnisotropyEnergy.ccNamedAtomID.hh
methods / ChemicalShiftAnisotropyEnergy.hhAtomID_Map.hh
packing / compute_holes_score_res.hhAtomID_Map.hh
packstat / compute_sasa.hhAtomID_Map.fwd.hh
constraints / ConstantConstraint.ccAtomID.hh
constraints / ConstantConstraint.hhAtomID.fwd.hh
constraints / Constraint.ccAtomID.hh
constraints / Constraint.hhAtomID.fwd.hh
constraints / Constraint.hhSequenceMapping.hh
constraints / ConstraintIO.ccAtomID.hh
constraints / Constraints.hhAtomID.fwd.hh
constraints / ConstraintsEnergy.hhTorsionID.fwd.hh
constraints / ConstraintSet.ccSequenceMapping.hh
constraints / ConstraintSet.hhAtomID.fwd.hh
constraints / ConstraintSet.hhDOF_ID.fwd.hh
constraints / ConstraintSet.hhSequenceMapping.fwd.hh
methods / ContextDependentTwoBodyEnergy.hhDOF_ID.fwd.hh
methods / ContextDependentTwoBodyEnergy.hhTorsionID.fwd.hh
geometric_solvation / ContextIndependentGeometricSolEnergy.ccAtomID.hh
constraints / CoordinateConstraint.ccAtomID.hh
constraints / CoordinateConstraint.ccNamedAtomID.hh
constraints / CoordinateConstraint.ccSequenceMapping.hh
constraints / CoordinateConstraint.hhAtomID.hh
methods / CustomAtomPairEnergy.ccAtomID.hh
constraints / DihedralConstraint.ccNamedAtomID.hh
constraints / DihedralConstraint.ccSequenceMapping.hh
constraints / DihedralConstraint.hhAtomID.hh
constraints / DihedralPairConstraint.ccNamedAtomID.hh
constraints / DihedralPairConstraint.ccSequenceMapping.hh
constraints / DihedralPairConstraint.hhAtomID.hh
methods / DipolarCouplingEnergy.ccNamedAtomID.hh
methods / DipolarCouplingEnergy.hhAtomID_Map.hh
constraints / DistancePairConstraint.ccNamedAtomID.hh
constraints / DistancePairConstraint.ccSequenceMapping.hh
constraints / DistancePairConstraint.hhAtomID.hh
disulfides / DisulfideMatchingPotential.ccDOF_ID_Mask.fwd.hh
methods / DNA_BaseEnergy.ccAtomID.hh
dna / DNAChiEnergy.ccTorsionID.hh
dna / DNATorsionEnergy.ccTorsionID.hh
constraints / DOF_Constraint.hhDOF_ID.hh
dssp / Dssp.ccAtomID.hh
dssp / Dssp.ccNamedAtomID.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.ccAtomID.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.hhDOF_ID.fwd.hh
electron_density_atomwise / ElecDensAtomwiseEnergy.hhTorsionID.fwd.hh
electron_density / ElectronDensity.ccAtomID.hh
electron_density_atomwise / ElectronDensityAtomwise.ccAtomID.hh
Energies.ccAtomID.hh
Energies.hhAtomID.fwd.hh
Energies.hhAtomID_Mask.fwd.hh
methods / EnergyMethod.hhAtomID.fwd.hh
methods / EnvSmoothEnergy.ccAtomID.hh
geometric_solvation / ExactOccludedHbondSolEnergy.ccAtomID.hh
geometric_solvation / ExactOccludedHbondSolEnergy.ccDOF_ID.hh
geometric_solvation / ExactOccludedHbondSolEnergy.ccDOF_ID_Map.fwd.hh
elec / FA_ElecEnergyAroAll.ccAtomID.hh
elec / FA_ElecEnergyAroAro.ccAtomID.hh
methods / Fa_MbenvEnergy.ccAtomID.hh
methods / Fa_MbsolvEnergy.ccAtomID.hh
constraints / FabConstraint.ccAtomID.hh
constraints / FabConstraint.hhSequenceMapping.fwd.hh
facts / FACTSEnergy.ccAtomID.fwd.hh
facts / FACTSEnergy.ccAtomID.hh
facts / FACTSEnergy.hhAtomID.fwd.hh
facts / FACTSPotential.ccAtomID.hh
facts / FACTSPotential.ccAtomID_Map.hh
facts / FACTSPotential.hhAtomID.fwd.hh
facts / FACTSResidue.ccAtomID.hh
facts / FACTSResidue.ccAtomID_Map.hh
membrane / FaMPEnvEnergy.ccAtomID.hh
membrane / FaMPEnvSmoothEnergy.ccAtomID.hh
membrane / FaMPSolvEnergy.ccAtomID.hh
saxs / FastSAXSEnergy.ccAtomID.hh
func / FourPointsFunc.ccAtomID.hh
methods / FreeMoietyEnergy.hhDOF_ID.fwd.hh
disulfides / FullatomDisulfideEnergy.hhTorsionID.fwd.hh
methods / GaussianOverlapEnergy.ccAtomID.hh
methods / GenBornEnergy.hhAtomID.fwd.hh
GenBornPotential.ccAtomID.hh
GenBornPotential.hhAtomID.fwd.hh
geometric_solvation / GeometricSolEnergyEvaluator.ccAtomID.hh
geometric_solvation / GeometricSolEnergyEvaluator.cctypes.hh
geometric_solvation / GeometricSolEnergyEvaluator.hhAtomID.fwd.hh
hackaro / HackAroEnergy.ccAtomID.hh
hbonds / HBondEnergy.cctypes.hh
hbonds / HBondSet.ccAtomID.hh
hbonds / HBondSet.hhAtomID.fwd.hh
packing / HolesEnergy.ccCacheableAtomID_MapVector.hh
packing / HolesEnergyRes.ccCacheableAtomID_MapVector.hh
methods / HybridVDW_Energy.ccAtomID.hh
constraints / KofNConstraint.ccAtomID.fwd.hh
constraints / KofNConstraint.ccAtomID.hh
constraints / KofNConstraint.ccSequenceMapping.fwd.hh
constraints / KofNConstraint.hhAtomID.hh
packstat / LeeRichards.hhAtomID.hh
packstat / LeeRichards.hhAtomID_Map.hh
sasa / LeGrandSasa.ccAtomID.hh
sasa / LeGrandSasa.ccAtomID_Map.hh
sasa / LeGrandSasa.hhAtomID_Map.fwd.hh
methods / LK_PolarNonPolarEnergy.ccAtomID.hh
constraints / LocalCoordinateConstraint.ccAtomID.hh
constraints / LocalCoordinateConstraint.ccNamedStubID.hh
constraints / LocalCoordinateConstraint.ccSequenceMapping.hh
constraints / LocalCoordinateConstraint.hhAtomID.hh
loop_graph / LoopCloseEnergy.ccAtomID.hh
loop_graph / LoopCloseEnergy.hhAtomID.hh
loop_graph / LoopGraph.hhAtomID.hh
loop_graph / LoopScoreInfo.ccAtomID.fwd.hh
loop_graph / LoopScoreInfo.hhAtomID.hh
methods / MembraneEnvSmoothEnergy.ccAtomID.hh
MinimizationGraph.hhDOF_ID.fwd.hh
MinimizationGraph.hhTorsionID.fwd.hh
methods / MMBondAngleEnergy.ccAtomID.hh
mm / MMBondAngleResidueTypeParamSet.hhAtomID.fwd.hh
methods / MMBondLengthEnergy.ccAtomID.hh
methods / MMTorsionEnergy.ccAtomID.hh
constraints / MultiConstraint.ccSequenceMapping.hh
constraints / MultiConstraint.hhAtomID.hh
constraints / NamedAtomPairConstraint.ccAtomID.hh
constraints / NamedAtomPairConstraint.ccExceptions.hh
constraints / NamedAtomPairConstraint.ccNamedAtomID.hh
constraints / NamedAtomPairConstraint.ccSequenceMapping.hh
constraints / NamedAtomPairConstraint.cctypes.hh
constraints / NamedAtomPairConstraint.hhAtomID.hh
constraints / NamedAtomPairConstraint.hhNamedAtomID.hh
NeighborList.hhAtomID.hh
NeighborList.tmpl.hhAtomID.fwd.hh
NeighborList.tmpl.hhAtomID.hh
NeighborList.tmpl.hhAtomID_Map.fwd.hh
NeighborList.tmpl.hhAtomID_Map.hh
NeighborList.tmpl.hhAtomID_Mask.fwd.hh
NeighborList.tmpl.hhDOF_ID.fwd.hh
NeighborList.tmpl.hhDOF_ID.hh
NeighborList.tmpl.hhDOF_ID_Map.fwd.hh
NeighborList.tmpl.hhDOF_ID_Map.hh
NeighborList.tmpl.hhDOF_ID_Mask.fwd.hh
NeighborList.tmpl.hhNamedAtomID.fwd.hh
NeighborList.tmpl.hhNamedAtomID.hh
NeighborList.tmpl.hhNamedStubID.fwd.hh
NeighborList.tmpl.hhSequenceMapping.fwd.hh
NeighborList.tmpl.hhTorsionID.fwd.hh
NeighborList.tmpl.hhtypes.hh
methods / NMerPSSMEnergy.hhDOF_ID.fwd.hh
methods / NMerPSSMEnergy.hhTorsionID.fwd.hh
methods / NMerRefEnergy.hhDOF_ID.fwd.hh
methods / NMerRefEnergy.hhTorsionID.fwd.hh
methods / NMerSVMEnergy.hhDOF_ID.fwd.hh
methods / NMerSVMEnergy.hhTorsionID.fwd.hh
constraints / NonResidueTypeConstraint.ccSequenceMapping.hh
constraints / NonResidueTypeConstraint.hhAtomID.hh
methods / OmegaTetherEnergy.ccTorsionID.hh
methods / OmegaTetherEnergy.hhDOF_ID.fwd.hh
methods / OneBodyEnergy.hhDOF_ID.fwd.hh
methods / OneBodyEnergy.hhTorsionID.fwd.hh
orbitals / OrbitalsScore.ccAtomID.hh
orbitals / OrbitalsScore.cctypes.hh
orbitals / OrbitalsScore.hhAtomID.fwd.hh
P_AA.ccTorsionID.hh
P_AA.hhTorsionID.fwd.hh
methods / P_AA_Energy.hhDOF_ID.fwd.hh
methods / P_AA_Energy.hhTorsionID.fwd.hh
methods / P_AA_pp_Energy.ccTorsionID.hh
methods / P_AA_pp_Energy.hhDOF_ID.fwd.hh
methods / PeptideBondEnergy.hhAtomID.fwd.hh
methods / pHEnergy.hhDOF_ID.fwd.hh
methods / pHEnergy.hhTorsionID.fwd.hh
packing / PoseBalls.hhAtomID.hh
packing / PoseBalls.hhAtomID_Map.hh
packing / PoseBalls.hhAtomID_Mask.fwd.hh
packing / PoseBallsLite.hhAtomID.hh
packing / PoseBallsLite.hhAtomID_Map.hh
packing / PoseBallsLite.hhAtomID_Mask.fwd.hh
methods / Rama2BOffsetEnergy.ccDOF_ID.hh
methods / Rama2BOffsetEnergy.ccTorsionID.hh
methods / RamachandranEnergy.ccTorsionID.hh
methods / RamachandranEnergy.hhDOF_ID.fwd.hh
methods / RamachandranEnergy2B.ccTorsionID.hh
methods / RamachandranEnergy2B.hhDOF_ID.fwd.hh
methods / ReferenceEnergy.hhDOF_ID.fwd.hh
methods / ReferenceEnergy.hhTorsionID.fwd.hh
methods / ReferenceEnergyNoncanonical.hhDOF_ID.fwd.hh
methods / ReferenceEnergyNoncanonical.hhTorsionID.fwd.hh
methods / ResidualDipolarCouplingEnergy.hhAtomID_Map.hh
methods / ResidualDipolarCouplingEnergyRigidSegments.ccNamedAtomID.hh
methods / ResidualDipolarCouplingEnergyRigidSegments.hhAtomID_Map.hh
constraints / ResidueTypeConstraint.ccSequenceMapping.hh
constraints / ResidueTypeConstraint.hhAtomID.hh
constraints / ResidueTypeLinkingConstraint.hhAtomID.hh
methods / RG_Energy_Fast.ccAtomID.hh
rna / RG_Energy_RNA.ccAtomID.hh
methods / RG_LocalEnergy.ccAtomID.hh
rms_util.ccAtomID.hh
rms_util.ccAtomID_Map.hh
rms_util.cctypes.hh
rms_util.hhAtomID.fwd.hh
rms_util.hhAtomID_Map.fwd.hh
rms_util.tmpl.hhAtomID.fwd.hh
rms_util.tmpl.hhAtomID.hh
rms_util.tmpl.hhAtomID_Map.fwd.hh
rms_util.tmpl.hhAtomID_Map.hh
rms_util.tmpl.hhAtomID_Mask.fwd.hh
rms_util.tmpl.hhDOF_ID.fwd.hh
rms_util.tmpl.hhDOF_ID.hh
rms_util.tmpl.hhDOF_ID_Map.fwd.hh
rms_util.tmpl.hhDOF_ID_Mask.fwd.hh
rms_util.tmpl.hhNamedAtomID.fwd.hh
rms_util.tmpl.hhNamedAtomID.hh
rms_util.tmpl.hhNamedStubID.fwd.hh
rms_util.tmpl.hhSequenceMapping.hh
rms_util.tmpl.hhTorsionID.fwd.hh
rms_util.tmpl.hhtypes.hh
rna / RNA_BulgeEnergy.hhDOF_ID.fwd.hh
rna / data / RNA_ChemicalMappingEnergy.ccAtomID.hh
rna / chemical_shift / RNA_ChemicalShiftEnergy.ccAtomID.hh
rna / chemical_shift / RNA_ChemicalShiftPotential.ccAtomID.hh
rna / chemical_shift / RNA_CS_MagneticAnisotropy.hhAtomID.fwd.hh
rna / chemical_shift / RNA_CS_Parameters.hhAtomID.fwd.hh
rna / chemical_shift / RNA_CS_RingCurrent.hhAtomID.fwd.hh
rna / chemical_shift / RNA_CS_Util.hhAtomID.fwd.hh
rna / data / RNA_DataBackboneEnergy.ccAtomID.hh
elec / RNA_FA_ElecEnergy.ccAtomID.hh
rna / RNA_FullAtomStackingEnergy.ccAtomID.hh
rna / RNA_FullAtomVDW_BasePhosphate.hhDOF_ID.fwd.hh
rna / RNA_JR_SuiteEnergy.ccTorsionID.hh
rna / RNA_LJ_BaseEnergy.ccAtomID.hh
rna / RNA_LowResolutionPotential.ccAtomID.hh
rna / RNA_LowResolutionPotential.hhAtomID.fwd.hh
rna / RNA_Mg_Energy.ccAtomID.hh
rna / RNA_SugarCloseEnergy.hhDOF_ID.fwd.hh
rna / RNA_SuiteEnergy.ccAtomID.hh
rna / RNA_SuiteEnergy.ccTorsionID.hh
rna / RNA_SuitePotential.hhTorsionID.hh
rna / RNA_TorsionPotential.ccDOF_ID_Mask.fwd.hh
rna / RNA_TorsionPotential.ccTorsionID.hh
rna / RNA_TorsionPotential.hhAtomID.fwd.hh
rna / RNA_TorsionPotential.hhTorsionID.fwd.hh
rna / RNA_VDW_Energy.ccAtomID.hh
sasa.ccAtomID.hh
sasa.ccAtomID_Map.hh
sasa.hhAtomID_Map.fwd.hh
sasa / SasaMethod.hhAtomID_Map.hh
saxs / SAXSEnergyFA.hhAtomID.fwd.hh
ScoreFunction.ccDOF_ID.hh
ScoreFunction.ccTorsionID.hh
ScoreFunction.hhAtomID.fwd.hh
ScoreFunction.hhDOF_ID.fwd.hh
ScoreFunction.hhTorsionID.fwd.hh
methods / SequenceDependentRefEnergy.hhDOF_ID.fwd.hh
methods / SequenceDependentRefEnergy.hhTorsionID.fwd.hh
constraints / SequenceProfileConstraint.ccSequenceMapping.hh
constraints / SequenceProfileConstraint.hhAtomID.hh
constraints / SiteConstraint.ccAtomID.hh
constraints / SiteConstraint.hhSequenceMapping.fwd.hh
constraints / SiteConstraintResidues.ccAtomID.hh
constraints / SiteConstraintResidues.hhSequenceMapping.fwd.hh
rna / StackElecEnergy.ccAtomID.hh
methods / SuckerEnergy.ccAtomID.hh
packing / surf_vol.hhAtomID_Map.hh
packing / surf_vol.hhAtomID_Mask.fwd.hh
packing / SurfEnergy.ccCacheableAtomID_MapVector.hh
packing / SurfVolEnergy.ccCacheableAtomID_MapVector.hh
symmetry / SymmetricEnergies.ccAtomID.hh
methods / SymmetricLigandEnergy.ccAtomID.hh
symmetry / SymmetricScoreFunction.ccTorsionID.hh
methods / TwoBodyEnergy.hhAtomID.fwd.hh
methods / TwoBodyEnergy.hhDOF_ID.fwd.hh
methods / TwoBodyEnergy.hhTorsionID.fwd.hh
packstat / types.hhAtomID.hh
methods / UnfoldedStateEnergy.hhDOF_ID.fwd.hh
methods / UnfoldedStateEnergy.hhTorsionID.fwd.hh
sasa / util.ccAtomID.hh
methods / util.ccAtomID.hh
dssp / util.ccAtomID.hh
sasa / util.ccAtomID_Map.hh
methods / util.hhAtomID.fwd.hh
sasa / util.hhAtomID_Map.fwd.hh
vdwaals / VDW_Energy.ccAtomID.hh
methods / WaterAdductIntraEnergy.hhDOF_ID.fwd.hh
methods / WaterAdductIntraEnergy.hhTorsionID.fwd.hh
cryst / XtalMLEnergy.ccAtomID.hh
cryst / XtalMLEnergy.ccNamedAtomID.hh
func / XYZ_Func.ccAtomID.hh
func / XYZ_Func.hhAtomID.fwd.hh
methods / YHHPlanarityEnergy.ccTorsionID.hh
methods / YHHPlanarityEnergy.hhDOF_ID.fwd.hh