Rosetta Protocols  2014.35
Public Types | Public Member Functions | Private Attributes | List of all members
protocols::protein_interface_design::filters::RelativeSegmentFilter Class Reference

returns the residues aligned to a segment on the input pdb to the source pdb More...

#include <RelativeSegmentFilter.hh>

Public Types

typedef core::Real Real
 
typedef core::Size Size
 

Public Member Functions

 RelativeSegmentFilter ()
 
bool apply (core::pose::Pose const &pose) const
 Returns true if the given pose passes the filter, false otherwise. More...
 
FilterOP clone () const
 
FilterOP fresh_instance () const
 
void report (std::ostream &out, core::pose::Pose const &pose) const
 
core::Real report_sm (core::pose::Pose const &pose) const
 used to report filter internals through a score or silent file More...
 
virtual ~RelativeSegmentFilter ()
 
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)
 
std::string source_pose () const
 
void source_pose (std::string const s)
 
core::Size start_res () const
 
void start_res (core::Size const s)
 
core::Size stop_res () const
 
void stop_res (core::Size const s)
 
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 
 Filter (std::string const &)
 
 Filter (Filter const &)
 
virtual ~Filter ()
 
virtual std::string get_type () const
 
std::string get_user_defined_name () const
 
void set_user_defined_name (std::string const &name)
 
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
 
virtual void parse_my_tag (utility::tag::TagCOP, basic::datacache::DataMap &, Filters_map const &, moves::Movers_map const &, core::pose::Pose const &)
 
virtual void apply (core::io::serialization::PipeMap &pmap)
 
virtual void score (core::io::serialization::PipeMap &pmap)
 
virtual core::Real score (core::pose::Pose &pose)
 
virtual void parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)
 
virtual std::string name () const
 

Private Attributes

std::string source_pose_
 
core::Size start_res_
 
core::Size stop_res_
 

Additional Inherited Members

- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_
 

Detailed Description

returns the residues aligned to a segment on the input pdb to the source pdb

Member Typedef Documentation

Constructor & Destructor Documentation

protocols::protein_interface_design::filters::RelativeSegmentFilter::RelativeSegmentFilter ( )
inline

Referenced by clone(), and fresh_instance().

protocols::protein_interface_design::filters::RelativeSegmentFilter::~RelativeSegmentFilter ( )
virtual

Member Function Documentation

bool protocols::protein_interface_design::filters::RelativeSegmentFilter::apply ( core::pose::Pose const &  pose) const
virtual
FilterOP protocols::protein_interface_design::filters::RelativeSegmentFilter::clone ( ) const
inlinevirtual
FilterOP protocols::protein_interface_design::filters::RelativeSegmentFilter::fresh_instance ( ) const
inlinevirtual
void protocols::protein_interface_design::filters::RelativeSegmentFilter::parse_my_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap ,
filters::Filters_map const &  ,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &  pose 
)
void protocols::protein_interface_design::filters::RelativeSegmentFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const
virtual

Reimplemented from protocols::filters::Filter.

core::Real protocols::protein_interface_design::filters::RelativeSegmentFilter::report_sm ( core::pose::Pose const &  ) const
virtual

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

std::string protocols::protein_interface_design::filters::RelativeSegmentFilter::source_pose ( ) const
inline

References source_pose_.

Referenced by apply(), and parse_my_tag().

void protocols::protein_interface_design::filters::RelativeSegmentFilter::source_pose ( std::string const  s)
inline

References source_pose_.

core::Size protocols::protein_interface_design::filters::RelativeSegmentFilter::start_res ( ) const
inline

References start_res_.

Referenced by apply(), and parse_my_tag().

void protocols::protein_interface_design::filters::RelativeSegmentFilter::start_res ( core::Size const  s)
inline

References start_res_.

core::Size protocols::protein_interface_design::filters::RelativeSegmentFilter::stop_res ( ) const
inline

References stop_res_.

Referenced by apply(), and parse_my_tag().

void protocols::protein_interface_design::filters::RelativeSegmentFilter::stop_res ( core::Size const  s)
inline

References stop_res_.

Member Data Documentation

std::string protocols::protein_interface_design::filters::RelativeSegmentFilter::source_pose_
private

Referenced by apply(), and source_pose().

core::Size protocols::protein_interface_design::filters::RelativeSegmentFilter::start_res_
private

Referenced by start_res().

core::Size protocols::protein_interface_design::filters::RelativeSegmentFilter::stop_res_
private

Referenced by stop_res().


The documentation for this class was generated from the following files: