Rosetta Protocols  2014.35
protocols::coarse_rna::CoarseRNA_Fragments Member List

This is the complete list of members for protocols::coarse_rna::CoarseRNA_Fragments, including all inherited members.

apply_random_fragment(core::pose::Pose &pose, core::Size const position, core::Size const size, core::Size const type, protocols::toolbox::AllowInsertOP allow_insert)protocols::coarse_rna::CoarseRNA_Fragmentsvirtual
coarse_rna_name_to_num_protocols::coarse_rna::CoarseRNA_Fragmentsprivate
CoarseRNA_Fragments(std::string const &filename)protocols::coarse_rna::CoarseRNA_Fragments
find_source_positions(SequenceSecStructPair const &key)protocols::coarse_rna::CoarseRNA_Fragmentsprivate
frag_source_file_protocols::coarse_rna::CoarseRNA_Fragmentsprivate
frag_source_pose_protocols::coarse_rna::CoarseRNA_Fragmentsprivate
frag_source_secstruct_protocols::coarse_rna::CoarseRNA_Fragmentsprivate
initialize_frag_source_pose()protocols::coarse_rna::CoarseRNA_Fragmentsprivate
insert_fragment(core::pose::Pose &pose, Size const &insert_res, Size const &source_res, Size const &frag_size, protocols::toolbox::AllowInsertOP allow_insert)protocols::coarse_rna::CoarseRNA_Fragmentsprivate
is_fullatom()protocols::coarse_rna::CoarseRNA_Fragmentsvirtual
name(core::Size const &i) const protocols::farna::RNA_Fragmentsinline
non_main_chain_sugar_coords(core::Size const &i, core::Size const &j, core::Size const &k) const protocols::farna::RNA_Fragmentsinline
non_main_chain_sugar_coords_defined() const protocols::farna::RNA_Fragmentsinline
pick_random_fragment(std::string const RNA_string, std::string const RNA_secstruct_string, Size const type)protocols::coarse_rna::CoarseRNA_Fragmentsprivate
pick_random_fragment(core::pose::Pose &pose, Size const position, Size const size, Size const type)protocols::coarse_rna::CoarseRNA_Fragmentsprivate
protocols::farna::RNA_Fragments::pick_random_fragment(TorsionSet &torsion_set, core::pose::Pose &pose, core::Size const position, core::Size const size, core::Size const type=MATCH_YR)protocols::farna::RNA_Fragments
read_vall_torsions(std::string const filename)protocols::farna::RNA_Fragments
RNA_Fragments()protocols::farna::RNA_Fragments
RNA_Fragments(std::string const filename)protocols::farna::RNA_Fragmentsinline
secstruct(core::Size const &i) const protocols::farna::RNA_Fragmentsinline
source_positions_map_protocols::coarse_rna::CoarseRNA_Fragmentsprivate
torsions(core::Size const &i, core::Size const &j) const protocols::farna::RNA_Fragmentsinline
~CoarseRNA_Fragments()protocols::coarse_rna::CoarseRNA_Fragmentsvirtual
~RNA_Fragments()protocols::farna::RNA_Fragmentsvirtual