Rosetta Protocols  2014.35
Public Member Functions | Private Types | Private Attributes | List of all members
protocols::matdes::InterfacePackingFilter Class Reference

#include <InterfacePackingFilter.hh>

Public Member Functions

 InterfacePackingFilter ()
 default ctor More...
 
virtual bool apply (core::pose::Pose const &pose) const
 Returns true if the given pose passes the filter, false otherwise. More...
 
virtual void report (std::ostream &out, core::pose::Pose const &pose) const
 
virtual core::Real report_sm (core::pose::Pose const &pose) const
 used to report filter internals through a score or silent file More...
 
virtual
protocols::filters::FilterOP 
clone () const
 
virtual
protocols::filters::FilterOP 
fresh_instance () const
 
core::Real compute (core::pose::Pose const &pose) const
 
virtual ~InterfacePackingFilter ()
 
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)
 
void parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)
 
core::Real distance_cutoff () const
 
core::Real contact_dist () const
 
core::Real lower_threshold () const
 
core::Real upper_threshold () const
 
bool multicomp () const
 
std::string sym_dof_names () const
 
void distance_cutoff (core::Real const d)
 
void contact_dist (core::Real const c)
 
void lower_threshold (core::Real const l)
 
void upper_threshold (core::Real const u)
 
void sym_dof_names (std::string const s)
 
void multicomp (bool const multicomp)
 
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 
 Filter (std::string const &)
 
 Filter (Filter const &)
 
virtual ~Filter ()
 
virtual std::string get_type () const
 
std::string get_user_defined_name () const
 
void set_user_defined_name (std::string const &name)
 
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
 
virtual void apply (core::io::serialization::PipeMap &pmap)
 
virtual void score (core::io::serialization::PipeMap &pmap)
 
virtual core::Real score (core::pose::Pose &pose)
 
virtual std::string name () const
 

Private Types

typedef protocols::filters::Filter parent
 

Private Attributes

core::Real distance_cutoff_
 
core::Real contact_dist_
 
core::Real lower_threshold_
 
core::Real upper_threshold_
 
bool multicomp_
 
std::string sym_dof_names_
 

Additional Inherited Members

- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_
 

Member Typedef Documentation

Constructor & Destructor Documentation

protocols::matdes::InterfacePackingFilter::InterfacePackingFilter ( )
protocols::matdes::InterfacePackingFilter::~InterfacePackingFilter ( )
virtual

Member Function Documentation

bool protocols::matdes::InterfacePackingFilter::apply ( core::pose::Pose const &  pose) const
virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute(), lower_threshold_, protocols::matdes::TR, and upper_threshold_.

protocols::filters::FilterOP protocols::matdes::InterfacePackingFilter::clone ( ) const
virtual
core::Real protocols::matdes::InterfacePackingFilter::compute ( core::pose::Pose const &  pose) const
core::Real protocols::matdes::InterfacePackingFilter::contact_dist ( ) const

References contact_dist_.

Referenced by parse_my_tag().

void protocols::matdes::InterfacePackingFilter::contact_dist ( core::Real const  c)

References contact_dist_.

core::Real protocols::matdes::InterfacePackingFilter::distance_cutoff ( ) const

References distance_cutoff_.

Referenced by parse_def(), and parse_my_tag().

void protocols::matdes::InterfacePackingFilter::distance_cutoff ( core::Real const  d)

References distance_cutoff_.

protocols::filters::FilterOP protocols::matdes::InterfacePackingFilter::fresh_instance ( ) const
virtual
core::Real protocols::matdes::InterfacePackingFilter::lower_threshold ( ) const

References lower_threshold_.

Referenced by parse_def(), and parse_my_tag().

void protocols::matdes::InterfacePackingFilter::lower_threshold ( core::Real const  l)

References lower_threshold_.

bool protocols::matdes::InterfacePackingFilter::multicomp ( ) const

References multicomp_.

Referenced by parse_my_tag().

void protocols::matdes::InterfacePackingFilter::multicomp ( bool const  multicomp)

References multicomp_.

void protocols::matdes::InterfacePackingFilter::parse_def ( utility::lua::LuaObject const &  def,
utility::lua::LuaObject const &  score_fxns,
utility::lua::LuaObject const &  tasks 
)
virtual
void protocols::matdes::InterfacePackingFilter::parse_my_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap ,
protocols::filters::Filters_map const &  ,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &   
)
virtual
void protocols::matdes::InterfacePackingFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const
virtual

Reimplemented from protocols::filters::Filter.

References compute().

core::Real protocols::matdes::InterfacePackingFilter::report_sm ( core::pose::Pose const &  ) const
virtual

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References compute().

std::string protocols::matdes::InterfacePackingFilter::sym_dof_names ( ) const

References sym_dof_names_.

Referenced by parse_my_tag().

void protocols::matdes::InterfacePackingFilter::sym_dof_names ( std::string const  s)

References sym_dof_names_.

core::Real protocols::matdes::InterfacePackingFilter::upper_threshold ( ) const

References upper_threshold_.

Referenced by parse_def(), and parse_my_tag().

void protocols::matdes::InterfacePackingFilter::upper_threshold ( core::Real const  u)

References upper_threshold_.

Member Data Documentation

core::Real protocols::matdes::InterfacePackingFilter::contact_dist_
private

Referenced by compute(), and contact_dist().

core::Real protocols::matdes::InterfacePackingFilter::distance_cutoff_
private

Referenced by compute(), and distance_cutoff().

core::Real protocols::matdes::InterfacePackingFilter::lower_threshold_
private

Referenced by apply(), and lower_threshold().

bool protocols::matdes::InterfacePackingFilter::multicomp_
private

Referenced by compute(), and multicomp().

std::string protocols::matdes::InterfacePackingFilter::sym_dof_names_
private

Referenced by compute(), and sym_dof_names().

core::Real protocols::matdes::InterfacePackingFilter::upper_threshold_
private

Referenced by apply(), and upper_threshold().


The documentation for this class was generated from the following files: