Rosetta Protocols  2014.35
Public Member Functions | Static Public Member Functions | Private Types | Private Attributes | List of all members
protocols::pose_reporters::RMSDReporter Class Reference

Report the RMSD between two poses. More...

#include <BasicPosePropertyReporters.hh>

Public Member Functions

 RMSDReporter ()
 
std::string get_name () const
 Each derived selector must specify its name. More...
 
core::Real report_property (core::pose::Pose &p1, core::pose::Pose &p2) const
 Report the RMSD between poses p1 and p2 Depending on the mode, this can be either all atom or CA RMSD, optionally with residue selection. More...
 
virtual void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data, protocols::filters::Filters_map &filters, protocols::moves::Movers_map const &movers, core::pose::Pose const &pose)
 Called by PosePropertyReporterFactory when constructing new PosePropertyReporters. Takes care of the specific selector's parsing. More...
 
- Public Member Functions inherited from protocols::rosetta_scripts::PosePropertyReporter
virtual core::Real report_property (core::pose::Pose &p) const
 Reports a specific property for the provided pose. More...
 

Static Public Member Functions

static std::string name ()
 
- Static Public Member Functions inherited from protocols::rosetta_scripts::PosePropertyReporter
static std::string name ()
 

Private Types

enum  { MODE_NONE, MODE_CA_rmsd, MODE_all_atom_rmsd }
 

Private Attributes

core::Size mode_
 
std::list< Sizeresidues_
 

Additional Inherited Members

- Protected Member Functions inherited from protocols::rosetta_scripts::PosePropertyReporter
 PosePropertyReporter ()
 
virtual ~PosePropertyReporter ()
 

Detailed Description

Report the RMSD between two poses.

Member Enumeration Documentation

anonymous enum
private
Enumerator
MODE_NONE 
MODE_CA_rmsd 
MODE_all_atom_rmsd 

Constructor & Destructor Documentation

protocols::pose_reporters::RMSDReporter::RMSDReporter ( )

Member Function Documentation

std::string protocols::pose_reporters::RMSDReporter::get_name ( ) const
inlinevirtual

Each derived selector must specify its name.

Implements protocols::rosetta_scripts::PosePropertyReporter.

References name().

static std::string protocols::pose_reporters::RMSDReporter::name ( )
inlinestatic

Referenced by get_name().

void protocols::pose_reporters::RMSDReporter::parse_my_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap data,
protocols::filters::Filters_map filters,
protocols::moves::Movers_map const &  movers,
core::pose::Pose const &  pose 
)
virtual

Called by PosePropertyReporterFactory when constructing new PosePropertyReporters. Takes care of the specific selector's parsing.

Reimplemented from protocols::rosetta_scripts::PosePropertyReporter.

References core::pose::get_resnum_list(), mode, mode_, MODE_all_atom_rmsd, MODE_CA_rmsd, MODE_NONE, residues, and residues_.

core::Real protocols::pose_reporters::RMSDReporter::report_property ( core::pose::Pose p1,
core::pose::Pose p2 
) const
virtual

Report the RMSD between poses p1 and p2 Depending on the mode, this can be either all atom or CA RMSD, optionally with residue selection.

Reimplemented from protocols::rosetta_scripts::PosePropertyReporter.

References core::scoring::all_atom_rmsd(), core::scoring::CA_rmsd(), mode_, MODE_all_atom_rmsd, MODE_CA_rmsd, residues_, core::pose::Pose::sequence(), and protocols::TR.

Member Data Documentation

core::Size protocols::pose_reporters::RMSDReporter::mode_
private

Referenced by parse_my_tag(), and report_property().

std::list<Size> protocols::pose_reporters::RMSDReporter::residues_
private

Referenced by parse_my_tag(), and report_property().


The documentation for this class was generated from the following files: