Rosetta Protocols  2014.35
Namespaces | Classes | Typedefs | Enumerations | Functions | Variables
protocols::sic_dock Namespace Reference

Namespaces

 scores
 

Classes

struct  AtomIDHashFunction
 
class  BuriedPolarScore
 
class  CBScore
 
struct  CBScoreVisitor
 
class  ConstraintSetScore
 
struct  CorrectionVisitor
 
class  EdgeStandScore
 
class  HelixScore
 
class  JointScore
 
class  LinkerScore
 
class  NoPoseXYX_Func
 
class  RigidScore
 
class  Rose
 
class  SICFast
 
struct  Vec3
 
struct  XfoxmScore
 
class  xyzStripeHashPose
 
class  xyzStripeHashPoseWithMeta
 

Typedefs

typedef numeric::xyzVector
< platform::Real
Vec
 
typedef numeric::xyzMatrix
< platform::Real
Mat
 
typedef core::Real Real
 
typedef core::Size Size
 
typedef core::pose::Pose Pose
 
typedef Xform Xform
 
typedef utility::vector1< VecVecs
 
typedef utility::vector1< RealReals
 
typedef utility::vector1< SizeSizes
 
typedef numeric::Xforms Xforms
 
typedef utility::vector1
< RigidScoreCOP
Scores
 
typedef
utility::pointer::owning_ptr
< RigidScore
RigidScoreOP
 
typedef
utility::pointer::owning_ptr
< RigidScore const > 
RigidScoreCOP
 
typedef
utility::pointer::owning_ptr
< CBScore
CBScoreOP
 
typedef
utility::pointer::owning_ptr
< CBScore const > 
CBScoreCOP
 
typedef
utility::pointer::owning_ptr
< LinkerScore
LinkerScoreOP
 
typedef
utility::pointer::owning_ptr
< LinkerScore const > 
LinkerScoreCOP
 
typedef
utility::pointer::owning_ptr
< ConstraintSetScore
ConstraintSetScoreOP
 
typedef
utility::pointer::owning_ptr
< ConstraintSetScore const > 
ConstraintSetScoreCOP
 
typedef
utility::pointer::owning_ptr
< JointScore
JointScoreOP
 
typedef
utility::pointer::owning_ptr
< JointScore const > 
JointScoreCOP
 
typedef
utility::pointer::owning_ptr
< SICFast
SICFastOP
 
typedef
utility::pointer::owning_ptr
< SICFast const > 
SICFastCOP
 
typedef utility::vector1
< std::pair< platform::Size,
Vec3 > > 
TermInfo
 
typedef utility::vector1< MatMats
 
typedef
utility::pointer::owning_ptr
< xyzStripeHashPose
xyzStripeHashPoseOP
 
typedef
utility::pointer::owning_ptr
< xyzStripeHashPose const > 
xyzStripeHashPoseCOP
 
typedef
utility::pointer::access_ptr
< xyzStripeHashPose const > 
xyzStripeHashPoseCAP
 
typedef
utility::pointer::owning_ptr
< xyzStripeHashPoseWithMeta
xyzStripeHashPoseWithMetaOP
 
typedef
utility::pointer::owning_ptr
< xyzStripeHashPoseWithMeta
const > 
xyzStripeHashPoseWithMetaCOP
 

Enumerations

enum  PoseCoordPickMode {
  NBR, CA, CB, CBorCA,
  BB, NCAC, NCO, BNP,
  HVY, ALL
}
 

Functions

void get_xform_stats (Xform const &sir, Xform const &sjr, Real &dx, Real &dy, Real &dz, Real &ex, Real &ey, Real &ez)
 
Vec3 get_leap_lower_stub (core::pose::Pose const &pose, Size ir)
 
Vec3 get_leap_upper_stub (core::pose::Pose const &pose, Size ir)
 
Xform vec3_to_stub (Vec3 const &v3)
 
Xform vec3_to_stub (Xform const &xform, Vec3 const &v3)
 
void get_termini_from_pose (core::pose::Pose const &pose, Size ir, TermInfo &lowers, TermInfo &uppers)
 
void get_termini_from_pose (core::pose::Pose const &pose, TermInfo &lowers, TermInfo &uppers)
 
numeric::geometry::hashing::Real6 get_leap_6dof (Xform const &lower, Xform const &upper)
 
Size count_linkers (Xform const &lower, Xform const &upper, protocols::loophash::LoopHashLibraryOP loop_hash_library, Sizes const &loopsizes, core::Size radius)
 
core::Size dump_loophash_linkers (Xform const &lower, Xform const &upper, protocols::loophash::LoopHashLibraryOP loop_hash_library, Sizes const &loopsizes, Size radius, std::string const &outtag)
 
Real linker_count2score (Size count)
 
platform::Size count_linkers (Xform const &lower, Xform const &upper, protocols::loophash::LoopHashLibraryOP loop_hash_library, utility::vector1< platform::Size > const &loopsizes, platform::Size radius=0)
 
platform::Size dump_loophash_linkers (Xform const &lower, Xform const &upper, protocols::loophash::LoopHashLibraryOP loop_hash_library, utility::vector1< platform::Size > const &loopsizes, platform::Size radius=0, std::string const &outtag="")
 
bool read_biounit (std::string const &fname, core::pose::Pose &pose, int const max_res, bool const debug)
 
bool read_biounit (std::string const &fname, core::pose::Pose &pose, utility::vector1< core::Real > &bfactors, utility::vector1< core::Real > &occupancy, int const max_res, bool const debug)
 
bool read_biounit (string const &fname, Pose &pose, vector1< Real > &bfactors, vector1< Real > &occupancy, vector1< int > &pdbres, std::map< int, char > &pdbchain, int &nresmodel1, int const max_res, bool const debug)
 
std::ostream & operator<< (std::ostream &out, Vec3 v)
 
template<typename T >
T CBScore_dist_score (T const &sqdist, T const &start, T const &stop)
 
double dist_score (double const &sqdist, double const &start, double const &stop)
 
bool get_bounds_intersection (vector1< Vec > const &pb, vector1< Vec > const &pa, double &xmx, double &xmn, double &ymx, double &ymn)
 
void fill_plane_hash (vector1< Vec > const &pb, vector1< Vec > const &pa, double const &xmx, double const &xmn, double const &ymx, double const &ymn, double const &BIN, ObjexxFCL::FArray2D< Vec > &ha, ObjexxFCL::FArray2D< Vec > &hb, int &xlb, int &ylb, int &xub, int &yub)
 
double get_mindis_with_plane_hashes (int const &xlb, int const &ylb, int const &xub, int const &yub, ObjexxFCL::FArray2D< Vec > const &ha, ObjexxFCL::FArray2D< Vec > const &hb, double const &clashdis2)
 
double refine_mindis_with_xyzHash (xyzStripeHashPose *xh, Xform const &xform_to_struct2_start, vector1< Vec > const &pa, vector1< Real > const &radii, Vec const &ori, double const &clash_dis_sq, double const &mindis_approx)
 
Real get_rg (core::pose::Pose const &pose)
 
int neighbor_count (core::pose::Pose const &pose, int ires, double distance_threshold)
 
Real cb_weight (core::pose::Pose const &pose, Size ires, Real distance_threshold)
 
void make_Cx (core::pose::Pose &pose, int N, numeric::xyzVector< core::Real > axis)
 
double slide_into_contact_and_score (protocols::sic_dock::SICFast const &sic, protocols::sic_dock::RigidScore const &sfxn, Xform &xa, Xform const &xb, numeric::xyzVector< core::Real > const &ori, core::Real &score)
 
double slide_into_contact_and_score_DEPRICATED (protocols::sic_dock::SICFast const &sic, protocols::sic_dock::RigidScore const &sfxn, core::kinematics::Stub &xa, core::kinematics::Stub const &xb, numeric::xyzVector< core::Real > const &ori, core::Real &score)
 
core::id::AtomID_Map< doublecb_weight_map_from_pose (core::pose::Pose const &pose)
 
core::Size count_CBs (core::pose::Pose const &pose)
 
core::pose::Pose const & pose_with_most_CBs (core::pose::Pose const &pose1, core::pose::Pose const &pose2)
 
bool pose1_has_most_CBs (core::pose::Pose const &pose1, core::pose::Pose const &pose2)
 
vector1< numeric::xyzVector
< core::Real > > 
get_CB_Vecs_from_pose (core::pose::Pose const &pose)
 
vector1< numeric::xyzVector
< core::Real > > 
get_CB_Vecs_from_map (core::pose::Pose const &pose, core::id::AtomID_Map< core::Real > const &map)
 
vector1< core::Realcb_weights_from_pose (core::pose::Pose const &pose)
 
vector1< core::Realcb_weights_from_map (core::pose::Pose const &pose, core::id::AtomID_Map< core::Real > const &map)
 
vector1< core::Sizerange (core::Size beg, core::Size end)
 
int flood_fill3D (int i, int j, int k, ObjexxFCL::FArray3D< double > &grid, double t)
 
bool residue_is_floppy (core::pose::Pose const &pose, Size const ir, Real const ttrim_cut, Size const nfold)
 
void auto_trim_floppy_termini (core::pose::Pose &pose, Real const ttrim_cut, Size const nfold)
 
void dump_points_pdb (vector1< Vec > const &p, std::string fn)
 
void dump_points_pdb (vector1< Vec > const &p, Vec t, std::string fn)
 
void trans_pose (Pose &pose, Vec const &trans, Size start, Size end)
 
void rot_pose (Pose &pose, Mat const &rot, Size start, Size end)
 
void rot_pose (Pose &pose, Mat const &rot, Vec const &cen, Size start, Size end)
 
void rot_pose (Pose &pose, Vec const &axis, Real const &ang, Size start, Size end)
 
void rot_pose (Pose &pose, Vec const &axis, Real const &ang, Vec const &cen, Size start, Size end)
 
void alignaxis (Pose &pose, Vec newaxis, Vec oldaxis, Vec cen)
 
numeric::xyzTransform< core::Realalignaxis_xform (numeric::xyzVector< core::Real > newaxis, numeric::xyzVector< core::Real > oldaxis, numeric::xyzVector< core::Real > cen)
 
void xform_pose (core::pose::Pose &pose, core::kinematics::Stub const &s, Size sres, Size eres)
 
void xform_pose_rev (core::pose::Pose &pose, core::kinematics::Stub const &s)
 
void xform_pose (core::pose::Pose &pose, numeric::xyzTransform< core::Real > const &s, Size sres, Size eres)
 
void xform_pose_rev (core::pose::Pose &pose, numeric::xyzTransform< core::Real > const &s)
 
Vec center_of_geom (core::pose::Pose const &pose, Size str, Size end)
 
core::kinematics::Stub getxform (core::conformation::Residue const &move_resi, core::conformation::Residue const &fixd_resi)
 
Real brute_mindis (vector1< Vec > const &pa, vector1< Vec > const &pb, Vec const &ofst=Vec(0, 0, 0))
 
Xform multstubs (Xform const &a, Xform const &b)
 
Xform invstub (Xform const &a)
 
void dump_points_pdb (utility::vector1< numeric::xyzVector< core::Real > > const &p, std::string fn)
 
void dump_points_pdb (utility::vector1< numeric::xyzVector< core::Real > > const &p, numeric::xyzVector< core::Real > t, std::string fn)
 
void trans_pose (core::pose::Pose &pose, numeric::xyzVector< core::Real > const &trans, core::Size start=1, core::Size end=0)
 
void rot_pose (core::pose::Pose &pose, numeric::xyzMatrix< core::Real > const &rot, core::Size start=1, core::Size end=0)
 
void rot_pose (core::pose::Pose &pose, numeric::xyzMatrix< core::Real > const &rot, numeric::xyzVector< core::Real > const &cen, core::Size start=1, core::Size end=0)
 
void rot_pose (core::pose::Pose &pose, numeric::xyzVector< core::Real > const &axis, core::Real const &ang, core::Size start=1, core::Size end=0)
 
void rot_pose (core::pose::Pose &pose, numeric::xyzVector< core::Real > const &axis, core::Real const &ang, numeric::xyzVector< core::Real > const &cen, core::Size start=1, core::Size end=0)
 
void alignaxis (core::pose::Pose &pose, numeric::xyzVector< core::Real > newaxis, numeric::xyzVector< core::Real > oldaxis, numeric::xyzVector< core::Real > cen=numeric::xyzVector< core::Real >(0, 0, 0))
 
numeric::xyzVector< core::Realprojperp (numeric::xyzVector< core::Real > const &u, numeric::xyzVector< core::Real > const &v)
 
template<typename T >
T sqr (T x)
 

Variables

static basic::Tracer TR ("protocols.sic_dock.RigidScore")
 
static basic::Tracer TR ("protocols.sic_dock.util")
 

Typedef Documentation

Enumeration Type Documentation

Enumerator
NBR 
CA 
CB 
CBorCA 
BB 
NCAC 
NCO 
BNP 
HVY 
ALL 

Function Documentation

void protocols::sic_dock::alignaxis ( core::pose::Pose pose,
numeric::xyzVector< core::Real newaxis,
numeric::xyzVector< core::Real oldaxis,
numeric::xyzVector< core::Real cen = numeric::xyzVectorcore::Real >(0, 0, 0) 
)
void protocols::sic_dock::alignaxis ( Pose pose,
Vec  newaxis,
Vec  oldaxis,
Vec  cen 
)
numeric::xyzTransform< core::Real > protocols::sic_dock::alignaxis_xform ( numeric::xyzVector< core::Real newaxis,
numeric::xyzVector< core::Real oldaxis,
numeric::xyzVector< core::Real cen 
)
void protocols::sic_dock::auto_trim_floppy_termini ( core::pose::Pose pose,
Real const  ttrim_cut,
Size const  nfold 
)
Real protocols::sic_dock::brute_mindis ( vector1< Vec > const &  pa,
vector1< Vec > const &  pb,
Vec const &  ofst = Vec(0,0,0) 
)

References min.

core::Real protocols::sic_dock::cb_weight ( core::pose::Pose const &  pose,
Size  ires,
Real  distance_threshold 
)
core::id::AtomID_Map< double > protocols::sic_dock::cb_weight_map_from_pose ( core::pose::Pose const &  pose)
utility::vector1< core::Real > protocols::sic_dock::cb_weights_from_map ( core::pose::Pose const &  pose,
core::id::AtomID_Map< core::Real > const &  map 
)
utility::vector1< core::Real > protocols::sic_dock::cb_weights_from_pose ( core::pose::Pose const &  pose)
template<typename T >
T protocols::sic_dock::CBScore_dist_score ( T const &  sqdist,
T const &  start,
T const &  stop 
)
inline
numeric::xyzVector< core::Real > protocols::sic_dock::center_of_geom ( core::pose::Pose const &  pose,
Size  str,
Size  end 
)
core::Size protocols::sic_dock::count_CBs ( core::pose::Pose const &  pose)
platform::Size protocols::sic_dock::count_linkers ( Xform const &  lower,
Xform const &  upper,
protocols::loophash::LoopHashLibraryOP  loop_hash_library,
utility::vector1< platform::Size > const &  loopsizes,
platform::Size  radius = 0 
)
Size protocols::sic_dock::count_linkers ( Xform const &  lower,
Xform const &  upper,
protocols::loophash::LoopHashLibraryOP  loop_hash_library,
Sizes const &  loopsizes,
core::Size  radius 
)
double protocols::sic_dock::dist_score ( double const &  sqdist,
double const &  start,
double const &  stop 
)
inline
platform::Size protocols::sic_dock::dump_loophash_linkers ( Xform const &  lower,
Xform const &  upper,
protocols::loophash::LoopHashLibraryOP  loop_hash_library,
utility::vector1< platform::Size > const &  loopsizes,
platform::Size  radius = 0,
std::string const &  outtag = "" 
)
core::Size protocols::sic_dock::dump_loophash_linkers ( Xform const &  lower,
Xform const &  upper,
protocols::loophash::LoopHashLibraryOP  loop_hash_library,
Sizes const &  loopsizes,
Size  radius,
std::string const &  outtag 
)
void protocols::sic_dock::dump_points_pdb ( utility::vector1< numeric::xyzVector< core::Real > > const &  p,
std::string  fn 
)
void protocols::sic_dock::dump_points_pdb ( utility::vector1< numeric::xyzVector< core::Real > > const &  p,
numeric::xyzVector< core::Real t,
std::string  fn 
)
void protocols::sic_dock::dump_points_pdb ( vector1< Vec > const &  p,
std::string  fn 
)

References F, I, and o.

void protocols::sic_dock::dump_points_pdb ( vector1< Vec > const &  p,
Vec  t,
std::string  fn 
)
void protocols::sic_dock::fill_plane_hash ( vector1< Vec > const &  pb,
vector1< Vec > const &  pa,
double const &  xmx,
double const &  xmn,
double const &  ymx,
double const &  ymn,
double const &  BIN,
ObjexxFCL::FArray2D< Vec > &  ha,
ObjexxFCL::FArray2D< Vec > &  hb,
int xlb,
int ylb,
int xub,
int yub 
)
inline
int protocols::sic_dock::flood_fill3D ( int  i,
int  j,
int  k,
ObjexxFCL::FArray3D< double > &  grid,
double  t 
)
bool protocols::sic_dock::get_bounds_intersection ( vector1< Vec > const &  pb,
vector1< Vec > const &  pa,
double xmx,
double xmn,
double ymx,
double ymn 
)
inline
utility::vector1< numeric::xyzVector< core::Real > > protocols::sic_dock::get_CB_Vecs_from_map ( core::pose::Pose const &  pose,
core::id::AtomID_Map< core::Real > const &  map 
)
utility::vector1< numeric::xyzVector< core::Real > > protocols::sic_dock::get_CB_Vecs_from_pose ( core::pose::Pose const &  pose)
numeric::geometry::hashing::Real6 protocols::sic_dock::get_leap_6dof ( Xform const &  lower,
Xform const &  upper 
)
Vec3 protocols::sic_dock::get_leap_lower_stub ( core::pose::Pose const &  pose,
Size  ir 
)
Vec3 protocols::sic_dock::get_leap_upper_stub ( core::pose::Pose const &  pose,
Size  ir 
)
double protocols::sic_dock::get_mindis_with_plane_hashes ( int const &  xlb,
int const &  ylb,
int const &  xub,
int const &  yub,
ObjexxFCL::FArray2D< Vec > const &  ha,
ObjexxFCL::FArray2D< Vec > const &  hb,
double const &  clashdis2 
)
inline
core::Real protocols::sic_dock::get_rg ( core::pose::Pose const &  pose)
void protocols::sic_dock::get_termini_from_pose ( core::pose::Pose const &  pose,
Size  ir,
TermInfo &  lowers,
TermInfo &  uppers 
)
void protocols::sic_dock::get_termini_from_pose ( core::pose::Pose const &  pose,
TermInfo &  lowers,
TermInfo &  uppers 
)
void protocols::sic_dock::get_xform_stats ( Xform const &  sir,
Xform const &  sjr,
Real dx,
Real dy,
Real dz,
Real ex,
Real ey,
Real ez 
)
core::kinematics::Stub protocols::sic_dock::getxform ( core::conformation::Residue const &  move_resi,
core::conformation::Residue const &  fixd_resi 
)
Xform protocols::sic_dock::invstub ( Xform const &  a)
inline
platform::Real protocols::sic_dock::linker_count2score ( Size  count)
void protocols::sic_dock::make_Cx ( core::pose::Pose pose,
int  N,
numeric::xyzVector< core::Real axis 
)
Xform protocols::sic_dock::multstubs ( Xform const &  a,
Xform const &  b 
)
inline
int protocols::sic_dock::neighbor_count ( core::pose::Pose const &  pose,
int  ires,
double  distance_threshold 
)
std::ostream& protocols::sic_dock::operator<< ( std::ostream &  out,
Vec3  v 
)
bool protocols::sic_dock::pose1_has_most_CBs ( core::pose::Pose const &  pose1,
core::pose::Pose const &  pose2 
)

References count_CBs().

core::pose::Pose const & protocols::sic_dock::pose_with_most_CBs ( core::pose::Pose const &  pose1,
core::pose::Pose const &  pose2 
)

References count_CBs().

numeric::xyzVector<core::Real> protocols::sic_dock::projperp ( numeric::xyzVector< core::Real > const &  u,
numeric::xyzVector< core::Real > const &  v 
)
inline

References projection_matrix().

utility::vector1< core::Size > protocols::sic_dock::range ( core::Size  beg,
core::Size  end 
)
bool protocols::sic_dock::read_biounit ( std::string const &  fname,
core::pose::Pose pose,
int const  max_res,
bool const  debug 
)
bool protocols::sic_dock::read_biounit ( std::string const &  fname,
core::pose::Pose pose,
utility::vector1< core::Real > &  bfactors,
utility::vector1< core::Real > &  occupancy,
int const  max_res,
bool const  debug 
)

References read_biounit().

bool protocols::sic_dock::read_biounit ( string const &  fname,
Pose pose,
vector1< Real > &  bfactors,
vector1< Real > &  occupancy,
vector1< int > &  pdbres,
std::map< int, char > &  pdbchain,
int nresmodel1,
int const  max_res,
bool const  debug 
)
double protocols::sic_dock::refine_mindis_with_xyzHash ( xyzStripeHashPose *  xh,
Xform const &  xform_to_struct2_start,
vector1< Vec > const &  pa,
vector1< Real > const &  radii,
Vec const &  ori,
double const &  clash_dis_sq,
double const &  mindis_approx 
)
inline
bool protocols::sic_dock::residue_is_floppy ( core::pose::Pose const &  pose,
Size const  ir,
Real const  ttrim_cut,
Size const  nfold 
)
void protocols::sic_dock::rot_pose ( core::pose::Pose pose,
numeric::xyzMatrix< core::Real > const &  rot,
core::Size  start = 1,
core::Size  end = 0 
)
void protocols::sic_dock::rot_pose ( core::pose::Pose pose,
numeric::xyzMatrix< core::Real > const &  rot,
numeric::xyzVector< core::Real > const &  cen,
core::Size  start = 1,
core::Size  end = 0 
)
void protocols::sic_dock::rot_pose ( core::pose::Pose pose,
numeric::xyzVector< core::Real > const &  axis,
core::Real const &  ang,
core::Size  start = 1,
core::Size  end = 0 
)
void protocols::sic_dock::rot_pose ( core::pose::Pose pose,
numeric::xyzVector< core::Real > const &  axis,
core::Real const &  ang,
numeric::xyzVector< core::Real > const &  cen,
core::Size  start = 1,
core::Size  end = 0 
)
void protocols::sic_dock::rot_pose ( Pose pose,
Mat const &  rot,
Size  start,
Size  end 
)
void protocols::sic_dock::rot_pose ( Pose pose,
Mat const &  rot,
Vec const &  cen,
Size  start,
Size  end 
)

References rot_pose(), and trans_pose().

void protocols::sic_dock::rot_pose ( Pose pose,
Vec const &  axis,
Real const &  ang,
Size  start,
Size  end 
)
void protocols::sic_dock::rot_pose ( Pose pose,
Vec const &  axis,
Real const &  ang,
Vec const &  cen,
Size  start,
Size  end 
)
double protocols::sic_dock::slide_into_contact_and_score ( protocols::sic_dock::SICFast const &  sic,
protocols::sic_dock::RigidScore const &  sfxn,
Xform xa,
Xform const &  xb,
numeric::xyzVector< core::Real > const &  ori,
core::Real score 
)
double protocols::sic_dock::slide_into_contact_and_score_DEPRICATED ( protocols::sic_dock::SICFast const &  sic,
protocols::sic_dock::RigidScore const &  sfxn,
core::kinematics::Stub xa,
core::kinematics::Stub const &  xb,
numeric::xyzVector< core::Real > const &  ori,
core::Real score 
)
template<typename T >
T protocols::sic_dock::sqr ( T  x)
inline
void protocols::sic_dock::trans_pose ( core::pose::Pose pose,
numeric::xyzVector< core::Real > const &  trans,
core::Size  start = 1,
core::Size  end = 0 
)
void protocols::sic_dock::trans_pose ( Pose pose,
Vec const &  trans,
Size  start,
Size  end 
)
Xform protocols::sic_dock::vec3_to_stub ( Vec3 const &  v3)
Xform protocols::sic_dock::vec3_to_stub ( Xform const &  xform,
Vec3 const &  v3 
)
void protocols::sic_dock::xform_pose ( core::pose::Pose pose,
core::kinematics::Stub const &  s,
Size  sres,
Size  eres 
)
void protocols::sic_dock::xform_pose ( core::pose::Pose pose,
numeric::xyzTransform< core::Real > const &  s,
Size  sres,
Size  eres 
)
void protocols::sic_dock::xform_pose_rev ( core::pose::Pose pose,
core::kinematics::Stub const &  s 
)
void protocols::sic_dock::xform_pose_rev ( core::pose::Pose pose,
numeric::xyzTransform< core::Real > const &  s 
)

Variable Documentation

basic::Tracer protocols::sic_dock::TR("protocols.sic_dock.RigidScore")
static
basic::Tracer protocols::sic_dock::TR("protocols.sic_dock.util")
static