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Rosetta Protocols
2014.35
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Rosetta Protocols
2014.35
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#include <TerminusDistanceFilter.hh>
Public Member Functions | |
| TerminusDistanceFilter () | |
| bool | apply (core::pose::Pose const &pose) const |
| Returns true if the given pose passes the filter, false otherwise. More... | |
| void | report (std::ostream &out, core::pose::Pose const &pose) const |
| core::Real | report_sm (core::pose::Pose const &pose) const |
| used to report filter internals through a score or silent file More... | |
| core::Real | compute (core::pose::Pose const &pose) const |
| filters::FilterOP | clone () const |
| filters::FilterOP | fresh_instance () const |
| virtual | ~TerminusDistanceFilter () |
| void | parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &) |
 Public Member Functions inherited from protocols::filters::Filter | |
| Filter () | |
| Filter (std::string const &) | |
| Filter (Filter const &) | |
| virtual | ~Filter () |
| virtual std::string | get_type () const |
| std::string | get_user_defined_name () const |
| void | set_user_defined_name (std::string const &name) |
| virtual void | clear () |
| used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More... | |
| virtual void | apply (core::io::serialization::PipeMap &pmap) |
| virtual void | score (core::io::serialization::PipeMap &pmap) |
| virtual core::Real | score (core::pose::Pose &pose) |
| virtual void | parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks) |
| virtual std::string | name () const |
Private Attributes | |
| core::Size | distance_ |
| core::Size | jump_num_ |
Additional Inherited Members | |
| Protected Attributes inherited from protocols::filters::Filter | |
| std::string | scorename_ |
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inline |
References filters.
Referenced by clone(), and fresh_instance().
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virtual |
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virtual |
Returns true if the given pose passes the filter, false otherwise.
Implements protocols::filters::Filter.
References compute(), distance_, and protocols::simple_filters::TR.
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inlinevirtual |
Implements protocols::filters::Filter.
References TerminusDistanceFilter().
| core::Real protocols::simple_filters::TerminusDistanceFilter::compute | ( | core::pose::Pose const & | pose | ) | const |
References chain, core::conformation::Residue::chain(), core::conformation::Conformation::chain_begin(), core::conformation::Conformation::chain_end(), core::pose::Pose::conformation(), distance_, core::scoring::get_score_function(), jump_num_, core::pose::Pose::num_jump(), core::pose::Pose::residue(), runtime_assert, and core::pose::Pose::total_residue().
Referenced by apply(), report(), and report_sm().
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inlinevirtual |
Implements protocols::filters::Filter.
References TerminusDistanceFilter().
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virtual |
Reimplemented from protocols::filters::Filter.
References core::scoring::TR.
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virtual |
Reimplemented from protocols::filters::Filter.
References compute().
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virtual |
used to report filter internals through a score or silent file
Reimplemented from protocols::filters::Filter.
References compute().
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private |
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private |
Referenced by compute().
1.8.7