Rosetta Protocols  2014.35
Classes | Namespaces | Functions | Variables
JumpSetup.hh File Reference

read jump-definition file setups fold tree an chainbreak variants loop code didn't work because fold-tree to complicated ( overlapping loops ) More...

#include <protocols/jumping/JumpSetup.fwd.hh>
#include <protocols/jumping/JumpSample.hh>
#include <core/types.hh>
#include <core/kinematics/ShortestPathInFoldTree.fwd.hh>
#include <core/kinematics/MoveMap.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/fragment/FrameList.fwd.hh>
#include <core/fragment/FragSet.fwd.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <basic/Tracer.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <cstdlib>
#include <string>
#include <utility/vector1.hh>

Classes

class  protocols::jumping::Interval
 two numbers, i.e., jump start end residue, or cut-regions... More...
 
class  protocols::jumping::BaseJumpSetup
 virtual base class: can create a set of jumps and cuts More...
 
class  protocols::jumping::JumpSetup
 
class  protocols::jumping::JumpSetup::JumpDef
 
class  protocols::jumping::JumpsFromAllPairings
 
class  protocols::jumping::JumpSelector
 
class  protocols::jumping::JumpSelector::JumpWeightDef
 

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::jumping
 

Functions

std::ostream & protocols::jumping::operator<< (std::ostream &os, JumpSample const &t)
 output operator More...
 

Variables

static basic::Tracer hh_tr ("protocols.jumping", basic::t_info)
 

Detailed Description

read jump-definition file setups fold tree an chainbreak variants loop code didn't work because fold-tree to complicated ( overlapping loops )

Detailed:
Author
Oliver Lange

Variable Documentation

basic::Tracer hh_tr("protocols.jumping", basic::t_info)
static