Set all the non-phi/psi DOFs to ideal values. More...

#include <IdealizeNonPhiPsi.hh>

Public Member Functions
std::string	get_name () const
	Return the name of this perturber. More...

void	perturb_subset (Pose const &pose, IndexList const &residues, ClosureProblemOP problem)

void	perturb_subset_with_balance (Pose const &pose, IndexList const &residues, ClosureProblemOP problem)
	Perturb the given residues such that detailed balance is obeyed. More...

Public Member Functions inherited from protocols::kinematic_closure::perturbers::Perturber
void	perturb (Pose const &pose, ClosureProblemOP problem)
	Perturb all of the non-pivot residues. More...

void	perturb_with_balance (Pose const &pose, ClosureProblemOP problem)
	Perturb all of the non-pivot residues such that detailed balance is obeyed. More...

Detailed Description

Set all the non-phi/psi DOFs to ideal values.

The phi and psi torsion angles don't really have ideal values; that's what the Ramachandran distribution is. Use the RamaPerturber to set sample those DOFs and this perturber to idealize all the others. Note that this perturber uses hard-coded ideal values that were inherited from the legacy kinematic closure implementation. I don't know how they were measured.

Member Function Documentation

std::string protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi::get_name ( ) const

inlinevirtual

Return the name of this perturber.

Implements protocols::kinematic_closure::perturbers::Perturber.

void protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi::perturb_subset	(	Pose const &	pose,
		IndexList const &	residues,
		ClosureProblemOP	problem
	)

virtual

Implements protocols::kinematic_closure::perturbers::Perturber.

References DEGREES, and residue.

Referenced by perturb_subset_with_balance().

void protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi::perturb_subset_with_balance	(	Pose const &	pose,
		IndexList const &	residues,
		ClosureProblemOP	problem
	)

virtual

Perturb the given residues such that detailed balance is obeyed.

If not reimplemented, this method will kill rosetta and complain that no balanced implementation of this algorithm exists.

Reimplemented from protocols::kinematic_closure::perturbers::Perturber.

References perturb_subset().

The documentation for this class was generated from the following files:

src/protocols/kinematic_closure/perturbers/IdealizeNonPhiPsi.hh
src/protocols/kinematic_closure/perturbers/IdealizeNonPhiPsi.cc

Public Member Functions

Detailed Description

Member Function Documentation