| add_constraints_ | protocols::simple_moves::CyclizationMover | private |
| apply(core::pose::Pose &pose) | protocols::simple_moves::CyclizationMover | virtual |
| protocols::moves::Mover::apply(core::io::serialization::PipeMap &pmap) | protocols::moves::Mover | virtual |
| chain_to_cyclize_ | protocols::simple_moves::CyclizationMover | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const | protocols::moves::Mover | virtual |
| create() | protocols::moves::Mover | virtual |
| cterm_rsd_num_ | protocols::simple_moves::CyclizationMover | private |
| CyclizationMover(core::Size chain_to_cyclize, bool add_constraints, bool minimize, core::Size minimization_rebuild_rounds) | protocols::simple_moves::CyclizationMover | |
| CyclizationMover(core::Size chain_to_cyclize, bool add_constraints, bool minimize, core::Size minimization_rebuild_rounds, core::scoring::ScoreFunctionOP score_fxn, core::kinematics::MoveMapOP move_map) | protocols::simple_moves::CyclizationMover | |
| Filters_map typedef | protocols::moves::Mover | |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const | protocols::simple_moves::CyclizationMover | inlinevirtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_type() const | protocols::moves::Mover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| minimization_rebuild_rounds_ | protocols::simple_moves::CyclizationMover | private |
| minimize_ | protocols::simple_moves::CyclizationMover | private |
| minimize_rebuild(core::pose::Pose &pose) | protocols::simple_moves::CyclizationMover | private |
| move_map_ | protocols::simple_moves::CyclizationMover | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| Mover(Mover const &other) | protocols::moves::Mover | |
| name() | protocols::moves::Mover | inlinestatic |
| nterm_rsd_num_ | protocols::simple_moves::CyclizationMover | private |
| operator=(Mover const &other) | protocols::moves::Mover | |
| parse_def(utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks, MoverCacheSP cache) | protocols::moves::Mover | virtual |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
| parse_state(SerializableState const &state) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| save_state(SerializableState &state) | protocols::moves::Mover | virtual |
| score_fxn_ | protocols::simple_moves::CyclizationMover | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inline |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| setup_connections(core::pose::Pose &pose) | protocols::simple_moves::CyclizationMover | private |
| setup_constraints(core::pose::Pose &pose) | protocols::simple_moves::CyclizationMover | private |
| setup_minimizer(core::pose::Pose &pose) | protocols::simple_moves::CyclizationMover | private |
| setup_scorefunction() | protocols::simple_moves::CyclizationMover | private |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type() const | protocols::moves::Mover | inline |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| ~CyclizationMover() | protocols::simple_moves::CyclizationMover | inlinevirtual |
| ~Mover() | protocols::moves::Mover | virtual |
1.8.7