Matker class that produces a new JCoupling object. More...

#include <JCoupling.hh>

Public Member Functions
	MakeJCoupling ()

FragmentScoringMethodOP	make (Size, Real, bool, FragmentPickerOP, std::string)
	Creates a JCoupling scoring method. More...

Public Member Functions inherited from protocols::frag_picker::scores::MakeFragmentScoringMethod
	MakeFragmentScoringMethod (std::string name)

std::string &	get_score_name ()

Detailed Description

Matker class that produces a new JCoupling object.

Constructor & Destructor Documentation

protocols::frag_picker::scores::MakeJCoupling::MakeJCoupling ( )

inline

FragmentScoringMethodOP protocols::frag_picker::scores::MakeJCoupling::make	(	Size	priority,
		Real	lowest_acceptable_value,
		bool	use_lowest,
		FragmentPickerOP	,
		std::string	input_file
	)

virtual

Creates a JCoupling scoring method.

Parameters

priority	- priority of the scoring method. The higher value the earlier the score will be evaluated
lowest_acceptable_value	- if a calculated score is higher than this value, fragment will be neglected
FragmentPickerOP	object - not used
extras	- additional parameters to create a new object. Allowed values are: empty: then the maker tries to create a scoring object from a TALOS file trying in::file::talos_phi_psi flag. If fails, will try to use a pose from in::file::s a pdb file, pdb extension is necessary. This will create a pose && steal Phi && Psi a TALOS file with Phi/Psi prediction (tab extension is necessary)

The documentation for this class was generated from the following files: