protocols::ligand_docking::CompleteConnectionsFilter Class Reference

#include <CompleteConnectionsFilter.hh>

Public Member Functions
	CompleteConnectionsFilter ()
	CompleteConnectionsFilter (std::string chain)
	CompleteConnectionsFilter (CompleteConnectionsFilter const &init)
virtual	~CompleteConnectionsFilter ()
bool	apply (core::pose::Pose const &pose) const
	Returns true if the given pose passes the filter, false otherwise. More...
protocols::filters::FilterOP	clone () const
protocols::filters::FilterOP	fresh_instance () const
void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, protocols::filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &reference_pose)
Public Member Functions inherited from protocols::filters::Filter
	Filter ()
	Filter (std::string const &)
	Filter (Filter const &)
virtual	~Filter ()
virtual void	report (std::ostream &, core::pose::Pose const &) const
virtual core::Real	report_sm (core::pose::Pose const &) const
	used to report filter internals through a score or silent file More...
virtual std::string	get_type () const
std::string	get_user_defined_name () const
void	set_user_defined_name (std::string const &name)
virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual void	apply (core::io::serialization::PipeMap &pmap)
virtual void	score (core::io::serialization::PipeMap &pmap)
virtual core::Real	score (core::pose::Pose &pose)
virtual void	parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)
virtual std::string	name () const

Private Attributes
std::string	chain_

Additional Inherited Members
Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Constructor & Destructor Documentation

protocols::ligand_docking::CompleteConnectionsFilter::CompleteConnectionsFilter ( )

inline

References filters.

Referenced by clone(), and fresh_instance().

protocols::ligand_docking::CompleteConnectionsFilter::CompleteConnectionsFilter ( std::string  chain )

inline

References filters.

protocols::ligand_docking::CompleteConnectionsFilter::CompleteConnectionsFilter ( CompleteConnectionsFilter const &  init )

inline

References filters.

virtual protocols::ligand_docking::CompleteConnectionsFilter::~CompleteConnectionsFilter ( )

inlinevirtual

Member Function Documentation

bool protocols::ligand_docking::CompleteConnectionsFilter::apply ( core::pose::Pose const &  pose ) const

virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References chain_, core::conformation::Conformation::chain_begin(), core::conformation::Conformation::chain_end(), protocols::ligand_docking::complete_connections_tracer, core::pose::Pose::conformation(), end, core::pose::get_chain_id_from_chain(), core::conformation::Residue::has_incomplete_connection(), core::conformation::Residue::name(), core::pose::Pose::residue(), and protocols::loops::start.

protocols::filters::FilterOP protocols::ligand_docking::CompleteConnectionsFilter::clone ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References CompleteConnectionsFilter().

protocols::filters::FilterOP protocols::ligand_docking::CompleteConnectionsFilter::fresh_instance ( ) const

inlinevirtual

Implements protocols::filters::Filter.

References CompleteConnectionsFilter().

void protocols::ligand_docking::CompleteConnectionsFilter::parse_my_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &  , protocols::filters::Filters_map const &  , protocols::moves::Movers_map const &  , core::pose::Pose const &  reference_pose  )

virtual

Reimplemented from protocols::filters::Filter.

References chain_, and protocols::ligand_docking::complete_connections_tracer.

Member Data Documentation

std::string protocols::ligand_docking::CompleteConnectionsFilter::chain_

private

Referenced by apply(), and parse_my_tag().

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The documentation for this class was generated from the following files:

• src/protocols/ligand_docking/CompleteConnectionsFilter.hh
• src/protocols/ligand_docking/CompleteConnectionsFilter.cc