protocols::stepwise::screener::BulgeApplier Class Reference

#include <BulgeApplier.hh>

Public Member Functions
	BulgeApplier (RNA_AtrRepCheckerOP atr_rep_checker, RNA_BaseCentroidCheckerOP base_centroid_checker, Size const moving_res)
	~BulgeApplier ()
std::string	name () const
StepWiseScreenerType	type () const
virtual void	add_mover (moves::CompositionMoverOP update_mover, moves::CompositionMoverOP restore_mover)
Public Member Functions inherited from protocols::stepwise::screener::StepWiseScreener
	StepWiseScreener ()
	~StepWiseScreener ()
virtual void	get_update (sampler::StepWiseSamplerBaseOP)
virtual void	apply_mover (moves::CompositionMoverOP, Size const, Size const )
virtual bool	check_screen ()
virtual void	fast_forward (sampler::StepWiseSamplerBaseOP)
Size const &	count () const
void	increment_count ()
void	reset ()
void	set_ok_to_increment (bool const setting)

Private Member Functions
bool	bulge_variant_decision ()

Private Attributes
RNA_AtrRepCheckerOP	atr_rep_checker_
RNA_BaseCentroidCheckerOP	base_centroid_checker_
modeler::rna::bulge::BulgeApplyMoverOP	bulge_apply_mover_
modeler::rna::bulge::BulgeUnApplyMoverOP	bulge_unapply_mover_

Constructor & Destructor Documentation

protocols::stepwise::screener::BulgeApplier::BulgeApplier	(	RNA_AtrRepCheckerOP	atr_rep_checker,
		RNA_BaseCentroidCheckerOP	base_centroid_checker,
		Size const	moving_res
	)

References rna.

protocols::stepwise::screener::BulgeApplier::~BulgeApplier

(

)

Member Function Documentation

void protocols::stepwise::screener::BulgeApplier::add_mover ( moves::CompositionMoverOP  update_mover, moves::CompositionMoverOP  restore_mover  )

virtual

Reimplemented from protocols::stepwise::screener::StepWiseScreener.

References bulge_apply_mover_, bulge_unapply_mover_, and bulge_variant_decision().

bool protocols::stepwise::screener::BulgeApplier::bulge_variant_decision ( )

private

References atr_rep_checker_, base_centroid_checker_, protocols::stepwise::modeler::rna::checker::RNA_AtrRepChecker::delta_atr_score(), protocols::stepwise::modeler::rna::checker::RNA_BaseCentroidChecker::found_centroid_interaction(), and runtime_assert.

Referenced by add_mover().

std::string protocols::stepwise::screener::BulgeApplier::name ( ) const

inlinevirtual

Implements protocols::stepwise::screener::StepWiseScreener.

StepWiseScreenerType protocols::stepwise::screener::BulgeApplier::type ( ) const

inlinevirtual

Implements protocols::stepwise::screener::StepWiseScreener.

References protocols::stepwise::screener::BULGE_APPLIER.

Member Data Documentation

RNA_AtrRepCheckerOP protocols::stepwise::screener::BulgeApplier::atr_rep_checker_

private

Referenced by bulge_variant_decision().

RNA_BaseCentroidCheckerOP protocols::stepwise::screener::BulgeApplier::base_centroid_checker_

private

Referenced by bulge_variant_decision().

modeler::rna::bulge::BulgeApplyMoverOP protocols::stepwise::screener::BulgeApplier::bulge_apply_mover_

private

Referenced by add_mover().

modeler::rna::bulge::BulgeUnApplyMoverOP protocols::stepwise::screener::BulgeApplier::bulge_unapply_mover_

private

Referenced by add_mover().

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The documentation for this class was generated from the following files:

• src/protocols/stepwise/screener/BulgeApplier.hh
• src/protocols/stepwise/screener/BulgeApplier.cc