#include <DimerPairing.hh>

Public Types
typedef core::Size	Size

typedef core::Real	Real

Public Member Functions
virtual	~DimerPairing ()
	Automatically generated virtual destructor for class deriving directly from ReferenceCount. More...

	DimerPairing (Size const res1, Size const res2, Real const dist, Real const phi, Real const theta, Real const sigma, Real const dp, Size const sign1, Size const sign2, Real const score)

Size	res1 () const

Size	res2 () const

Real	dist () const

Real	phi () const

Real	theta () const

Real	dp () const

Real	sigma () const

Size	sign1 () const

Size	sign2 () const

Real	score () const

char	orient () const

bool	valid () const

void	valid (bool const v)

bool	is_parallel (Real const phi, Real const theta)
	the pairing is parallel ? More...

Private Attributes
Size	res1_

Size	res2_

Real	dist_

Real	phi_

Real	theta_

Real	sigma_

Real	dp_

Size	sign1_

Size	sign2_

Real	score_

char	orient_

bool	valid_

Friends
std::ostream &	operator<< (std::ostream &out, const DimerPairing &dp)

Member Typedef Documentation

typedef core::Real protocols::fldsgn::topology::DimerPairing::Real

typedef core::Size protocols::fldsgn::topology::DimerPairing::Size

Constructor & Destructor Documentation

protocols::fldsgn::topology::DimerPairing::~DimerPairing ( )

virtual

Automatically generated virtual destructor for class deriving directly from ReferenceCount.

Auto-generated virtual destructor

protocols::fldsgn::topology::DimerPairing::DimerPairing	(	Size const	res1,
		Size const	res2,
		Real const	dist,
		Real const	phi,
		Real const	theta,
		Real const	sigma,
		Real const	dp,
		Size const	sign1,
		Size const	sign2,
		Real const	score
	)

References is_parallel(), and orient_.

Member Function Documentation

Real protocols::fldsgn::topology::DimerPairing::dist ( ) const

inline

References dist_.

Referenced by protocols::fldsgn::topology::operator<<().

Real protocols::fldsgn::topology::DimerPairing::dp ( ) const

inline

References dp_.

Referenced by protocols::fldsgn::topology::operator<<().

bool protocols::fldsgn::topology::DimerPairing::is_parallel	(	Real const	phi,
		Real const	theta
	)

the pairing is parallel ?

References runtime_assert.

Referenced by DimerPairing().

char protocols::fldsgn::topology::DimerPairing::orient ( ) const

inline

References orient_.

Referenced by protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs(), and protocols::fldsgn::topology::operator<<().

Real protocols::fldsgn::topology::DimerPairing::phi ( ) const

inline

References phi_.

Referenced by protocols::fldsgn::topology::operator<<().

Size protocols::fldsgn::topology::DimerPairing::res1 ( ) const

inline

References res1_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs(), protocols::fldsgn::topology::operator<<(), and protocols::fldsgn::potentials::sspot::SSPairPotential::score().

Size protocols::fldsgn::topology::DimerPairing::res2 ( ) const

inline

References res2_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs(), protocols::fldsgn::topology::operator<<(), and protocols::fldsgn::potentials::sspot::SSPairPotential::score().

Real protocols::fldsgn::topology::DimerPairing::score ( ) const

inline

References score_.

Referenced by protocols::fldsgn::topology::operator<<(), and protocols::fldsgn::potentials::sspot::SSPairPotential::score().

Real protocols::fldsgn::topology::DimerPairing::sigma ( ) const

inline

References sigma_.

Referenced by protocols::fldsgn::topology::operator<<().

Size protocols::fldsgn::topology::DimerPairing::sign1 ( ) const

inline

References sign1_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs(), and protocols::fldsgn::topology::operator<<().

Size protocols::fldsgn::topology::DimerPairing::sign2 ( ) const

inline

References sign2_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), protocols::fldsgn::topology::StrandPairingSet::initialize_by_dimer_pairs(), and protocols::fldsgn::topology::operator<<().

Real protocols::fldsgn::topology::DimerPairing::theta ( ) const

inline

References theta_.

Referenced by protocols::fldsgn::topology::operator<<().

bool protocols::fldsgn::topology::DimerPairing::valid ( ) const

inline

References valid_.

Referenced by protocols::fldsgn::topology::DimerPairings::finalize(), and protocols::fldsgn::potentials::sspot::SSPairPotential::score().

void protocols::fldsgn::topology::DimerPairing::valid ( bool const v )

inline

References valid_.

Friends And Related Function Documentation

std::ostream& operator<<	(	std::ostream &	out,
		const DimerPairing &	dp
	)

friend

Member Data Documentation

Real protocols::fldsgn::topology::DimerPairing::dist_

private

Referenced by dist().

Real protocols::fldsgn::topology::DimerPairing::dp_

private

Referenced by dp().

char protocols::fldsgn::topology::DimerPairing::orient_

private

Referenced by DimerPairing(), and orient().

Real protocols::fldsgn::topology::DimerPairing::phi_

private

Referenced by phi().

Size protocols::fldsgn::topology::DimerPairing::res1_

private

Referenced by res1().

Size protocols::fldsgn::topology::DimerPairing::res2_

private

Referenced by res2().

Real protocols::fldsgn::topology::DimerPairing::score_

private

Referenced by score().

Real protocols::fldsgn::topology::DimerPairing::sigma_

private

Referenced by sigma().

Size protocols::fldsgn::topology::DimerPairing::sign1_

private

Referenced by sign1().

Size protocols::fldsgn::topology::DimerPairing::sign2_

private

Referenced by sign2().

Real protocols::fldsgn::topology::DimerPairing::theta_

private

Referenced by theta().

bool protocols::fldsgn::topology::DimerPairing::valid_

private

Referenced by valid().

The documentation for this class was generated from the following files:

src/protocols/fldsgn/topology/DimerPairing.hh
src/protocols/fldsgn/topology/DimerPairing.cc

Public Types

Public Member Functions

Private Attributes

Friends

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation

Member Data Documentation