protocols::simple_filters::SelectRmsdEvaluator Class Reference

#include <RmsdEvaluator.hh>

Public Member Functions
	SelectRmsdEvaluator (core::pose::PoseCOP, core::scoring::ResidueSelection const &selection, std::string tag="", bool CAonly=true)
	SelectRmsdEvaluator (core::pose::PoseCOP, utility::vector1< core::Size > const &selection, std::string tag="", bool CAonly=true)
	SelectRmsdEvaluator (core::pose::PoseCOP, std::string tag="", bool CAonly=true)
	SelectRmsdEvaluator (core::pose::Pose const &, std::string tag="", bool CAonly=true)
virtual core::Real	apply (core::pose::Pose &) const
	evaluate pose More...
Public Member Functions inherited from protocols::evaluation::SingleValuePoseEvaluator< core::Real >
	SingleValuePoseEvaluator (std::string name="UNSPECIFIED_SingleValuePoseEvaluator")
virtual void	apply (core::pose::Pose &, std::string tag, core::io::silent::SilentStruct &pss) const
	evaluate pose and store values in Silent_Struct why is this specific to a specific type of SilentStruct? that seems needlessly pointless and overly constraining. More...
virtual bool	applicable (core::pose::Pose const &) const
virtual core::Size	size () const
virtual std::string	name (core::Size) const
Public Member Functions inherited from protocols::evaluation::PoseEvaluator
	PoseEvaluator ()
virtual	~PoseEvaluator ()
virtual void	apply (core::io::silent::SilentStruct &pss) const
	direct application to SilentStruct... default implementation makes pose and calls "apply", you can overload if you don't need the pose-step More...

Private Attributes
core::pose::PoseCOP	rmsd_pose_
core::scoring::ResidueSelection	selection_
std::string	tag_
bool	CAonly_

Constructor & Destructor Documentation

protocols::simple_filters::SelectRmsdEvaluator::SelectRmsdEvaluator	(	core::pose::PoseCOP	,
		core::scoring::ResidueSelection const &	selection,
		std::string	tag = "",
		bool	CAonly = true
	)

protocols::simple_filters::SelectRmsdEvaluator::SelectRmsdEvaluator	(	core::pose::PoseCOP	pose,
		utility::vector1< core::Size > const &	selection,
		std::string	tag = "",
		bool	CAonly = true
	)

References evaluation, and selection_.

protocols::simple_filters::SelectRmsdEvaluator::SelectRmsdEvaluator	(	core::pose::PoseCOP	pose,
		std::string	tag = "",
		bool	CAonly = true
	)

References evaluation, protocols::evaluation::find_existing_residues(), and selection_.

protocols::simple_filters::SelectRmsdEvaluator::SelectRmsdEvaluator	(	core::pose::Pose const &	pose,
		std::string	tag = "",
		bool	CAonly = true
	)

References evaluation, protocols::evaluation::find_existing_residues(), rmsd_pose_, and selection_.

Member Function Documentation

Real protocols::simple_filters::SelectRmsdEvaluator::apply ( core::pose::Pose &  pose ) const

virtual

evaluate pose

Implements protocols::evaluation::SingleValuePoseEvaluator< core::Real >.

References core::scoring::all_atom_rmsd(), core::scoring::CA_rmsd(), CAonly_, protocols::jd2::get_current_jobs_starting_pose(), protocols::jd2::jd2_used(), rmsd, rmsd_pose_, runtime_assert, selection_, tag_, and utility_exit_with_message.

Member Data Documentation

bool protocols::simple_filters::SelectRmsdEvaluator::CAonly_

private

Referenced by apply().

core::pose::PoseCOP protocols::simple_filters::SelectRmsdEvaluator::rmsd_pose_

private

Referenced by apply(), and SelectRmsdEvaluator().

core::scoring::ResidueSelection protocols::simple_filters::SelectRmsdEvaluator::selection_

private

Referenced by apply(), and SelectRmsdEvaluator().

std::string protocols::simple_filters::SelectRmsdEvaluator::tag_

private

Referenced by apply().

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The documentation for this class was generated from the following files:

• src/protocols/simple_filters/RmsdEvaluator.hh
• src/protocols/simple_filters/RmsdEvaluator.cc