Rosetta Protocols  2014.35
protocols::forge::build::BuildManager Member List

This is the complete list of members for protocols::forge::build::BuildManager, including all inherited members.

add(BuildInstructionOP bi)protocols::forge::build::BuildManager
begin() const protocols::forge::build::BuildManagerinline
BIOPConstIterator typedefprotocols::forge::build::BuildManager
BIOPIterator typedefprotocols::forge::build::BuildManager
BuildInstructionOPs typedefprotocols::forge::build::BuildManager
BuildManager()protocols::forge::build::BuildManager
BuildManager(BuildManager const &rval)protocols::forge::build::BuildManager
clear()protocols::forge::build::BuildManager
clear_dependencies()protocols::forge::build::BuildManager
clone() const protocols::forge::build::BuildManagervirtual
compatibility_check() const protocols::forge::build::BuildManager
create() const protocols::forge::build::BuildManagervirtual
create_directed_dependency(BuildInstructionOP u, BuildInstructionOP v)protocols::forge::build::BuildManager
defined_positions() const protocols::forge::build::BuildManager
dependencies_exist() const protocols::forge::build::BuildManagerinline
DependencyEdge typedefprotocols::forge::build::BuildManager
DependencyEdges typedefprotocols::forge::build::BuildManager
dummy_modify(Size const nres)protocols::forge::build::BuildManager
empty() const protocols::forge::build::BuildManagerinline
end() const protocols::forge::build::BuildManagerinline
find_dependency(BuildInstructionCOP u, BuildInstructionCOP v)protocols::forge::build::BuildManagerprivate
find_dependency(BuildInstructionCOP u, BuildInstructionCOP v) const protocols::forge::build::BuildManagerprivate
find_instruction(BuildInstructionCOP u)protocols::forge::build::BuildManagerprivate
find_instruction(BuildInstructionCOP u) const protocols::forge::build::BuildManagerprivate
instruction_dependencies_protocols::forge::build::BuildManagerprivate
instructions_protocols::forge::build::BuildManagerprivate
Interval2Interval typedefprotocols::forge::build::BuildManager
Interval2MoveMap typedefprotocols::forge::build::BuildManager
Interval2Positions typedefprotocols::forge::build::BuildManager
intervals() const protocols::forge::build::BuildManager
intervals_containing_defined_positions() const protocols::forge::build::BuildManager
intervals_containing_new_positions() const protocols::forge::build::BuildManager
intervals_containing_preexisting_positions() const protocols::forge::build::BuildManager
intervals_containing_undefined_positions() const protocols::forge::build::BuildManager
intervals_without_valid_original_equivalents() const protocols::forge::build::BuildManager
Modified2Original typedefprotocols::forge::build::BuildManager
modified2original_interval_endpoints() const protocols::forge::build::BuildManager
modified2original_intervals() const protocols::forge::build::BuildManager
modified_i2p_defined() const protocols::forge::build::BuildManager
modified_i2p_new() const protocols::forge::build::BuildManager
modified_i2p_preexisting() const protocols::forge::build::BuildManager
modified_i2p_undefined() const protocols::forge::build::BuildManager
modified_interval2movemap() const protocols::forge::build::BuildManager
modify(Pose &pose)protocols::forge::build::BuildManager
modify_was_successful_protocols::forge::build::BuildManagerprivate
MoveMap typedefprotocols::forge::build::BuildManager
movemap() const protocols::forge::build::BuildManager
movemap_as_OP() const protocols::forge::build::BuildManager
MoveMapOP typedefprotocols::forge::build::BuildManager
n_dependencies() const protocols::forge::build::BuildManagerinline
new_positions() const protocols::forge::build::BuildManager
operator=(BuildManager const &rval)protocols::forge::build::BuildManager
original2modified() const protocols::forge::build::BuildManager
Original2Modified typedefprotocols::forge::build::BuildManager
original2modified_protocols::forge::build::BuildManagerprivate
original2modified_interval_endpoints() const protocols::forge::build::BuildManager
original2modified_intervals() const protocols::forge::build::BuildManager
original_deleted_positions() const protocols::forge::build::BuildManager
original_i2p_deleted() const protocols::forge::build::BuildManager
original_i2p_kept() const protocols::forge::build::BuildManager
original_intervals_containing_deleted_positions() const protocols::forge::build::BuildManager
original_intervals_containing_kept_positions() const protocols::forge::build::BuildManager
original_kept_positions() const protocols::forge::build::BuildManager
Pose typedefprotocols::forge::build::BuildManager
Positions typedefprotocols::forge::build::BuildManager
positions() const protocols::forge::build::BuildManager
preexisting_positions() const protocols::forge::build::BuildManager
reconstruct_dependencies(DependencyEdges const &dependency_list)protocols::forge::build::BuildManagerprivate
reset_accounting()protocols::forge::build::BuildManager
seqmap_protocols::forge::build::BuildManagerprivate
sequence_mapping() const protocols::forge::build::BuildManager
SequenceMapping typedefprotocols::forge::build::BuildManager
SequenceMappingCOP typedefprotocols::forge::build::BuildManager
SequenceMappingOP typedefprotocols::forge::build::BuildManager
size() const protocols::forge::build::BuildManagerinline
Size typedefprotocols::forge::build::BuildManager
String typedefprotocols::forge::build::BuildManager
Super typedefprotocols::forge::build::BuildManagerprivate
undefined_positions() const protocols::forge::build::BuildManager
union_of_intervals_containing_undefined_positions() const protocols::forge::build::BuildManager
~BuildManager()protocols::forge::build::BuildManagervirtual