Rosetta Protocols  2014.35
Public Member Functions | Private Attributes | List of all members
protocols::simple_filters::InterfaceBindingEnergyDensityFilter Class Reference

#include <InterfaceBindingEnergyDensityFilter.hh>

Public Member Functions

 InterfaceBindingEnergyDensityFilter ()
 
 InterfaceBindingEnergyDensityFilter (InterfaceSasaFilterOP sasa_filter, DdgFilterOP ddG_filter, core::Real threshold)
 
virtual ~InterfaceBindingEnergyDensityFilter ()
 
void set_interface_sasa_filter (InterfaceSasaFilterOP sasa_filter)
 
void set_ddG_filter (DdgFilterOP ddG_filter)
 
void set_upper_threshold (core::Real threshold)
 
bool apply (core::pose::Pose const &pose) const
 Returns true if the given pose passes the filter, false otherwise. More...
 
void report (std::ostream &out, core::pose::Pose const &pose) const
 
core::Real report_sm (core::pose::Pose const &pose) const
 used to report filter internals through a score or silent file More...
 
core::Real compute (core::pose::Pose const &pose) const
 
filters::FilterOP clone () const
 
filters::FilterOP fresh_instance () const
 
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, filters::Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &)
 
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 
 Filter (std::string const &)
 
 Filter (Filter const &)
 
virtual ~Filter ()
 
virtual std::string get_type () const
 
std::string get_user_defined_name () const
 
void set_user_defined_name (std::string const &name)
 
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
 
virtual void apply (core::io::serialization::PipeMap &pmap)
 
virtual void score (core::io::serialization::PipeMap &pmap)
 
virtual core::Real score (core::pose::Pose &pose)
 
virtual void parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks)
 
virtual std::string name () const
 

Private Attributes

InterfaceSasaFilterOP sasa_filter_
 
DdgFilterOP ddG_filter_
 
core::Real upper_threshold_
 

Additional Inherited Members

- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_
 

Constructor & Destructor Documentation

protocols::simple_filters::InterfaceBindingEnergyDensityFilter::InterfaceBindingEnergyDensityFilter ( )

Referenced by clone().

protocols::simple_filters::InterfaceBindingEnergyDensityFilter::InterfaceBindingEnergyDensityFilter ( InterfaceSasaFilterOP  sasa_filter,
DdgFilterOP  ddG_filter,
core::Real  threshold 
)
protocols::simple_filters::InterfaceBindingEnergyDensityFilter::~InterfaceBindingEnergyDensityFilter ( )
virtual

Member Function Documentation

bool protocols::simple_filters::InterfaceBindingEnergyDensityFilter::apply ( core::pose::Pose const &  pose) const
virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References ddG_filter_, sasa, sasa_filter_, protocols::simple_filters::TR, and upper_threshold_.

filters::FilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::clone ( ) const
virtual
core::Real protocols::simple_filters::InterfaceBindingEnergyDensityFilter::compute ( core::pose::Pose const &  pose) const

References ddG_filter_, sasa, and sasa_filter_.

filters::FilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::fresh_instance ( ) const
virtual
void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::parse_my_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap ,
filters::Filters_map const &  filters_map,
protocols::moves::Movers_map const &  ,
core::pose::Pose const &   
)
virtual
void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const
virtual

Reimplemented from protocols::filters::Filter.

References ddG_filter_, sasa, and sasa_filter_.

core::Real protocols::simple_filters::InterfaceBindingEnergyDensityFilter::report_sm ( core::pose::Pose const &  ) const
virtual

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References ddG_filter_, sasa, and sasa_filter_.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::set_ddG_filter ( DdgFilterOP  ddG_filter)

References ddG_filter_.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::set_interface_sasa_filter ( InterfaceSasaFilterOP  sasa_filter)

References sasa_filter_.

void protocols::simple_filters::InterfaceBindingEnergyDensityFilter::set_upper_threshold ( core::Real  threshold)

References upper_threshold_.

Member Data Documentation

DdgFilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::ddG_filter_
private
InterfaceSasaFilterOP protocols::simple_filters::InterfaceBindingEnergyDensityFilter::sasa_filter_
private
core::Real protocols::simple_filters::InterfaceBindingEnergyDensityFilter::upper_threshold_
private

The documentation for this class was generated from the following files: