Rosetta Protocols  2014.35
Namespaces | Functions | Variables
ThreadingJobInputter.cc File Reference
#include <protocols/comparative_modeling/ThreadingJobInputter.hh>
#include <protocols/comparative_modeling/ThreadingJobInputterCreator.hh>
#include <protocols/comparative_modeling/ThreadingJob.hh>
#include <protocols/jd2/Job.hh>
#include <protocols/jd2/InnerJob.hh>
#include <string>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/cm.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/nonlocal.OptionKeys.gen.hh>
#include <utility/vector1.hh>
#include <utility/file/FileName.hh>
#include <utility/io/izstream.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/import_pose/import_pose.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/pose/annotated_sequence.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/sequence/Sequence.hh>
#include <core/sequence/util.hh>
#include <protocols/comparative_modeling/ThreadingMover.hh>
#include <protocols/comparative_modeling/ExtraThreadingMover.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::comparative_modeling
 

Functions

std::map< std::string,
utility::vector1< core::Size > > 
protocols::comparative_modeling::read_extra_residues (utility::vector1< std::string > const &fns)
 

Variables

static basic::Tracer protocols::comparative_modeling::tr ("protocols.comparative_modeling.ThreadingJobInputter")