Rosetta Protocols  2014.35
Public Types | Public Member Functions | Private Attributes | List of all members
protocols::toolbox::task_operations::SelectResiduesWithinChainOperation Class Reference

#include <SelectResiduesWithinChain.hh>

Public Types

typedef RestrictOperationsBase parent
 
- Public Types inherited from protocols::toolbox::task_operations::RestrictOperationsBase
typedef
core::pack::task::operation::TaskOperation 
TaskOperation
 
typedef
core::pack::task::operation::TaskOperationOP 
TaskOperationOP
 
typedef TaskOperation parent
 

Public Member Functions

 SelectResiduesWithinChainOperation ()
 
virtual ~SelectResiduesWithinChainOperation ()
 
virtual TaskOperationOP clone () const
 
virtual void apply (core::pose::Pose const &, core::pack::task::PackerTask &) const
 restricts to repacking all residues outside of design_shell_ around each residue More...
 
virtual void parse_tag (TagCOP, DataMap &)
 
core::Size chain () const
 
void chain (core::Size const c)
 
utility::vector1< core::Sizeresid ()
 
void add_res (core::Size const resid)
 
void allow_design (bool const b)
 
bool allow_design () const
 
void allow_repacking (bool const b)
 
bool allow_repacking () const
 
void modify_unselected_residues (bool const b)
 
bool modify_unselected_residues () const
 
- Public Member Functions inherited from protocols::toolbox::task_operations::RestrictOperationsBase
 RestrictOperationsBase ()
 
virtual ~RestrictOperationsBase ()
 

Private Attributes

core::Size chain_
 
utility::vector1< core::Sizeresid_
 
bool allow_design_
 
bool allow_repacking_
 
bool modify_unselected_residues_
 

Additional Inherited Members

- Protected Member Functions inherited from protocols::toolbox::task_operations::RestrictOperationsBase
void run_calculator (core::pose::Pose const &pose, std::string const &calculator, std::string const &calculation, utility::vector1_bool &residues) const
 this is the only real function - it takes a calculator name and calculation, and a PackerTask-compatible vector, and flips booleans in the vector according to the calculator More...
 

Detailed Description

this class is a TaskOperation to prevent repacking of residues not near an interface.

Member Typedef Documentation

Constructor & Destructor Documentation

protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::SelectResiduesWithinChainOperation ( )

References resid_.

Referenced by clone().

protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::~SelectResiduesWithinChainOperation ( )
virtual

Member Function Documentation

void protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::add_res ( core::Size const  resid)
inline

References resid_.

void protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::allow_design ( bool const  b)
inline
bool protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::allow_design ( ) const
inline

References allow_design_.

Referenced by apply(), and parse_tag().

void protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::allow_repacking ( bool const  b)
inline
bool protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::allow_repacking ( ) const
inline

References allow_repacking_.

Referenced by apply(), and parse_tag().

void protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::apply ( core::pose::Pose const &  pose,
core::pack::task::PackerTask task 
) const
virtual
core::Size protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::chain ( ) const
inline

References chain_.

Referenced by apply(), and parse_tag().

void protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::chain ( core::Size const  c)
inline

References chain_.

core::pack::task::operation::TaskOperationOP protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::clone ( ) const
virtual
void protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::modify_unselected_residues ( bool const  b)
inline
bool protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::modify_unselected_residues ( ) const
inline

References modify_unselected_residues_.

Referenced by apply(), and parse_tag().

void protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::parse_tag ( TagCOP  tag,
DataMap  
)
virtual
utility::vector1< core::Size > protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::resid ( )
inline

References resid_.

Referenced by parse_tag().

Member Data Documentation

bool protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::allow_design_
private

Referenced by allow_design().

bool protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::allow_repacking_
private

Referenced by allow_repacking().

core::Size protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::chain_
private

Referenced by chain().

bool protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::modify_unselected_residues_
private
utility::vector1< core::Size > protocols::toolbox::task_operations::SelectResiduesWithinChainOperation::resid_
private

The documentation for this class was generated from the following files: