Rosetta Protocols  2014.35
Namespaces | Functions
pose_manipulation.hh File Reference

some general functions to manipulate poses. feel free to add your own More...

#include <core/types.hh>
#include <utility/vector1.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/chemical/ResidueType.fwd.hh>
#include <utility/vector1.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::toolbox
 
 protocols::toolbox::pose_manipulation
 

Functions

void protocols::toolbox::pose_manipulation::construct_poly_ala_pose (core::pose::Pose &pose, utility::vector1< core::Size > const &positions, bool keep_pro, bool keep_gly, bool keep_disulfide_cys)
 puts in ala residues at the positions specified in the 'positions' input array More...
 
void protocols::toolbox::pose_manipulation::construct_poly_uniq_restype_pose (core::pose::Pose &pose, utility::vector1< core::Size > const &positions, core::chemical::ResidueType const &restype, bool keep_pro, bool keep_gly, bool keep_disulfide_cys)
 allows construction of a polymer of any residue type More...
 
void protocols::toolbox::pose_manipulation::construct_poly_XXX_pose (std::string const &aa, core::pose::Pose &pose, utility::vector1< core::Size > const &positions, bool keep_pro, bool keep_gly, bool keep_disulfide_cys)
 puts in XXX residues at the positions specified in the 'positions' input array More...
 
void protocols::toolbox::pose_manipulation::remove_non_protein_residues (core::pose::Pose &pose)
 deletes all nonprotein residues from a pose More...
 
void protocols::toolbox::pose_manipulation::add_chainbreaks_according_to_jumps (core::pose::Pose &pose)
 adds chainbreak residue types depending on fold tree jumps More...
 
void protocols::toolbox::pose_manipulation::remove_chainbreaks_according_to_jumps (core::pose::Pose &pose)
 removes chainbreak residue types depending on fold tree jumps More...
 
core::Real protocols::toolbox::pose_manipulation::superimpose_pose_on_subset_CA (core::pose::Pose &pose, core::pose::Pose const &ref_pose, utility::vector1< core::Size > const &positions, int const offset=0)
 superimposes one pose onto the other at the positions specified and More...
 

Detailed Description

some general functions to manipulate poses. feel free to add your own

if you add your own, please mention your name:)

Author
Florian Richter, flori.nosp@m.c@u..nosp@m.washi.nosp@m.ngto.nosp@m.n.edu
Steven Lewis, smlew.nosp@m.i@gm.nosp@m.ail.c.nosp@m.om (insert_pose_into_pose) domain insertion code