protocols::frag_picker::DiversifyCrmsdSelector Class Reference

selects fragments by running several selectors More...

#include <DiversifyCrmsdSelector.hh>

Public Member Functions
	DiversifyCrmsdSelector (core::Size frags_per_pos, core::Real cutoff)
	Constructor sets the desired number of fragments and crmsd cutoff. More...
virtual void	select_fragments (ScoredCandidatesVector1 const &, ScoredCandidatesVector1 &)
	Selects desired number of fragments from a given set of candidates. More...
virtual	~DiversifyCrmsdSelector ()
Public Member Functions inherited from protocols::frag_picker::FragmentSelectingRule
	FragmentSelectingRule (Size frags_per_pos)
	Constructor sets the desired number of fragments. More...
Size	frags_per_pos ()
	Says how many fragments will be selected for each position in a query sequence. More...
virtual	~FragmentSelectingRule ()

Private Member Functions
void	copy_coordinates (FragmentCandidateOP src, ObjexxFCL::FArray2D_double &dst)

Private Attributes
core::Real	cutoff_
ObjexxFCL::FArray2D_double	fi_
ObjexxFCL::FArray2D_double	fj_
ObjexxFCL::FArray1D_double	weights_

Detailed Description

selects fragments by running several selectors

Constructor & Destructor Documentation

protocols::frag_picker::DiversifyCrmsdSelector::DiversifyCrmsdSelector ( core::Size  frags_per_pos, core::Real  cutoff  )

inline

Constructor sets the desired number of fragments and crmsd cutoff.

References cutoff_.

virtual protocols::frag_picker::DiversifyCrmsdSelector::~DiversifyCrmsdSelector ( )

inlinevirtual

Member Function Documentation

void protocols::frag_picker::DiversifyCrmsdSelector::copy_coordinates ( FragmentCandidateOP  src, ObjexxFCL::FArray2D_double &  dst  )

private

References core::pose::Pose::xyz(), and protocols::kinmatch::xyz().

void protocols::frag_picker::DiversifyCrmsdSelector::select_fragments ( ScoredCandidatesVector1 const &  in, ScoredCandidatesVector1 &  out  )

virtual

Selects desired number of fragments from a given set of candidates.

Implements protocols::frag_picker::FragmentSelectingRule.

References rms, numeric::model_quality::rms_wrapper(), and protocols::frag_picker::trDiversifyCrmsdSelector.

Member Data Documentation

core::Real protocols::frag_picker::DiversifyCrmsdSelector::cutoff_

private

Referenced by DiversifyCrmsdSelector().

ObjexxFCL::FArray2D_double protocols::frag_picker::DiversifyCrmsdSelector::fi_

private

ObjexxFCL::FArray2D_double protocols::frag_picker::DiversifyCrmsdSelector::fj_

private

ObjexxFCL::FArray1D_double protocols::frag_picker::DiversifyCrmsdSelector::weights_

private

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The documentation for this class was generated from the following files:

• src/protocols/frag_picker/DiversifyCrmsdSelector.hh
• src/protocols/frag_picker/DiversifyCrmsdSelector.cc