#include <EnzFilters.hh>
|
| DiffAtomSasaFilter () |
|
| DiffAtomSasaFilter (core::Size resid1, core::Size resid2, std::string atomname1, std::string atomane2, std::string sample_type) |
|
bool | apply (core::pose::Pose const &pose) const |
| Returns true if the given pose passes the filter, false otherwise. More...
|
|
FilterOP | clone () const |
|
FilterOP | fresh_instance () const |
|
void | report (std::ostream &out, core::pose::Pose const &pose) const |
|
core::Real | report_sm (core::pose::Pose const &pose) const |
| used to report filter internals through a score or silent file More...
|
|
bool | compute (core::pose::Pose const &pose) const |
|
virtual | ~DiffAtomSasaFilter () |
|
void | parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &, Filters_map const &, protocols::moves::Movers_map const &, core::pose::Pose const &pose) |
|
| Filter () |
|
| Filter (std::string const &) |
|
| Filter (Filter const &) |
|
virtual | ~Filter () |
|
virtual std::string | get_type () const |
|
std::string | get_user_defined_name () const |
|
void | set_user_defined_name (std::string const &name) |
|
virtual void | clear () |
| used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
|
|
virtual void | apply (core::io::serialization::PipeMap &pmap) |
|
virtual void | score (core::io::serialization::PipeMap &pmap) |
|
virtual core::Real | score (core::pose::Pose &pose) |
|
virtual void | parse_def (utility::lua::LuaObject const &def, utility::lua::LuaObject const &score_fxns, utility::lua::LuaObject const &tasks) |
|
virtual std::string | name () const |
|
protocols::enzdes::DiffAtomSasaFilter::DiffAtomSasaFilter |
( |
| ) |
|
|
inline |
protocols::enzdes::DiffAtomSasaFilter::~DiffAtomSasaFilter |
( |
| ) |
|
|
virtual |
FilterOP protocols::enzdes::DiffAtomSasaFilter::clone |
( |
| ) |
const |
|
inlinevirtual |
References aname1_, aname2_, core::conformation::Residue::atom_index(), core::pose::Pose::metric(), resid1_, resid2_, core::pose::Pose::residue(), sample_type_, protocols::enzdes::TR, and basic::MetricValue< T >::value().
Referenced by apply(), report(), and report_sm().
FilterOP protocols::enzdes::DiffAtomSasaFilter::fresh_instance |
( |
| ) |
const |
|
inlinevirtual |
Reimplemented from protocols::filters::Filter.
References aname1_, aname2_, protocols::ligand_docking::LigandBaseProtocol::get_ligand_id(), core::pose::get_resnum(), core::conformation::Residue::has(), resid1_, resid2_, core::pose::Pose::residue(), runtime_assert, sample_type_, core::pose::Pose::total_residue(), and protocols::enzdes::TR.
void protocols::enzdes::DiffAtomSasaFilter::report |
( |
std::ostream & |
out, |
|
|
core::pose::Pose const & |
pose |
|
) |
| const |
|
virtual |
std::string protocols::enzdes::DiffAtomSasaFilter::aname1_ |
|
private |
std::string protocols::enzdes::DiffAtomSasaFilter::aname2_ |
|
private |
core::Size protocols::enzdes::DiffAtomSasaFilter::resid1_ |
|
private |
core::Size protocols::enzdes::DiffAtomSasaFilter::resid2_ |
|
private |
std::string protocols::enzdes::DiffAtomSasaFilter::sample_type_ |
|
private |
The documentation for this class was generated from the following files: