Rosetta Protocols  2014.35
Classes | Namespaces | Variables
MembraneAbinitio.cc File Reference

ab-initio fragment assembly protocol for membrane proteins More...

#include <protocols/abinitio/MembraneAbinitio.hh>
#include <protocols/simple_moves/GunnCost.hh>
#include <core/pose/Pose.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/types.hh>
#include <core/scoring/ScoreFunction.fwd.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/MembraneTopology.hh>
#include <core/scoring/MembranePotential.hh>
#include <core/scoring/MembranePotential.fwd.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/ProteinSilentStruct.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <basic/options/keys/abinitio.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/moves/TrialMover.hh>
#include <protocols/moves/RepeatMover.hh>
#include <protocols/moves/WhileMover.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <utility/vector1.fwd.hh>
#include <utility/pointer/ReferenceCount.hh>
#include <numeric/numeric.functions.hh>
#include <basic/prof.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/option_macros.hh>
#include <cstdlib>
#include <core/fragment/FragSet.hh>
#include <core/io/silent/ProteinSilentStruct.tmpl.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <numeric/random/random.fwd.hh>

Classes

class  protocols::abinitio::AllResiduesChanged
 (helper) functor class which keeps track of initial phi/psi values. calls of operator ( pose ) compare the initial phi/psi values More...
 

Namespaces

 ObjexxFCL
 Application level code for relax-type protocols.
 
 ObjexxFCL::format
 
 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::abinitio
 

Variables

static basic::Tracer tr ("protocols.membrane.abinitio", basic::t_info)
 

Detailed Description

ab-initio fragment assembly protocol for membrane proteins

Detailed:
Contains currently: Membrane Abinitio
Author
Bjorn Wallner (copied some time ago from ClassicAbinitio.cc of Oliver Lange )

Variable Documentation

basic::Tracer tr("protocols.membrane.abinitio", basic::t_info)
static