Rosetta Protocols  2014.35
Classes | Namespaces
SameSequenceGrouper.hh File Reference
#include <protocols/match/output/SameSequenceGrouper.fwd.hh>
#include <protocols/match/downstream/DownstreamBuilder.fwd.hh>
#include <protocols/match/output/MatchGrouper.hh>
#include <protocols/match/output/UpstreamHitCacher.fwd.hh>
#include <protocols/match/Hit.fwd.hh>
#include <core/id/AtomID.fwd.hh>
#include <utility/vector1.hh>
#include <map>
#include <utility/OrderedTuple.fwd.hh>


class  protocols::match::output::SameSequenceGrouper
 Class to group matches that represent the same amino acids at the same launch points. E.g. Two matches that both put a cys at launch point #33, a ser a launch point #42 and another ser at launch point #80 would be grouped together – even if they are different rotamers. More...
class  protocols::match::output::SameSequenceAndDSPositionGrouper
 class that groups based on same sequence and proximity of the downstream object (based on rms ) NOTE: right now only the downstream position according to the first geomcst id upstream residue is taken into account More...


 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.

Detailed Description

Alex Zanghellini (zangh.nosp@m.ell@.nosp@m.u.was.nosp@m.hing.nosp@m.ton.e.nosp@m.du)
Andrew Leaver-Fay (, porting to mini