protocols::stepwise::screener::BaseCentroidScreener Class Reference

#include <BaseCentroidScreener.hh>

Public Member Functions
	BaseCentroidScreener (modeler::rna::checker::RNA_BaseCentroidCheckerOP base_centroid_checker, core::pose::PoseOP screening_pose, bool const force_centroid_interaction=true)
	BaseCentroidScreener (modeler::rna::checker::RNA_BaseCentroidCheckerOP base_centroid_checker, core::kinematics::Stub const &moving_res_base_stub)
	~BaseCentroidScreener ()
std::string	name () const
StepWiseScreenerType	type () const
virtual bool	check_screen ()
void	fast_forward (sampler::StepWiseSamplerBaseOP sampler)
Public Member Functions inherited from protocols::stepwise::screener::StepWiseScreener
	StepWiseScreener ()
	~StepWiseScreener ()
virtual void	get_update (sampler::StepWiseSamplerBaseOP)
virtual void	apply_mover (moves::CompositionMoverOP, Size const, Size const )
virtual void	add_mover (moves::CompositionMoverOP update_mover, moves::CompositionMoverOP restore_mover)
Size const &	count () const
void	increment_count ()
void	reset ()
void	set_ok_to_increment (bool const setting)

Private Attributes
modeler::rna::checker::RNA_BaseCentroidCheckerOP	base_centroid_checker_
core::pose::PoseOP	screening_pose_
bool const	force_centroid_interaction_
bool const	using_stub_
core::kinematics::Stub const &	moving_res_base_stub_
modeler::rna::StepWiseRNA_CountStruct	count_data_

Constructor & Destructor Documentation

protocols::stepwise::screener::BaseCentroidScreener::BaseCentroidScreener	(	modeler::rna::checker::RNA_BaseCentroidCheckerOP	base_centroid_checker,
		core::pose::PoseOP	screening_pose,
		bool const	force_centroid_interaction = true
	)

References default_stub.

protocols::stepwise::screener::BaseCentroidScreener::BaseCentroidScreener	(	modeler::rna::checker::RNA_BaseCentroidCheckerOP	base_centroid_checker,
		core::kinematics::Stub const &	moving_res_base_stub
	)

protocols::stepwise::screener::BaseCentroidScreener::~BaseCentroidScreener

(

)

Member Function Documentation

bool protocols::stepwise::screener::BaseCentroidScreener::check_screen ( )

virtual

Reimplemented from protocols::stepwise::screener::StepWiseScreener.

References base_centroid_checker_, protocols::stepwise::modeler::rna::checker::RNA_BaseCentroidChecker::check_centroid_interaction(), protocols::stepwise::modeler::rna::checker::RNA_BaseCentroidChecker::check_that_terminal_res_are_unstacked(), count_data_, force_centroid_interaction_, moving_res_base_stub_, screening_pose_, protocols::stepwise::modeler::rna::checker::RNA_BaseCentroidChecker::update_base_stub_list_and_check_centroid_interaction(), and using_stub_.

void protocols::stepwise::screener::BaseCentroidScreener::fast_forward ( sampler::StepWiseSamplerBaseOP  sampler )

virtual

Reimplemented from protocols::stepwise::screener::StepWiseScreener.

References utility::pointer::owning_ptr< T >::get(), protocols::stepwise::sampler::RIGID_BODY, protocols::stepwise::sampler::RIGID_BODY_WITH_RESIDUE_ALTERNATIVES, protocols::stepwise::sampler::RIGID_BODY_WITH_RESIDUE_LIST, and protocols::stepwise::sampler::StepWiseSamplerBase::type().

std::string protocols::stepwise::screener::BaseCentroidScreener::name ( ) const

inlinevirtual

Implements protocols::stepwise::screener::StepWiseScreener.

StepWiseScreenerType protocols::stepwise::screener::BaseCentroidScreener::type ( ) const

inlinevirtual

Implements protocols::stepwise::screener::StepWiseScreener.

References protocols::stepwise::screener::BASE_CENTROID.

Member Data Documentation

modeler::rna::checker::RNA_BaseCentroidCheckerOP protocols::stepwise::screener::BaseCentroidScreener::base_centroid_checker_

private

Referenced by check_screen().

modeler::rna::StepWiseRNA_CountStruct protocols::stepwise::screener::BaseCentroidScreener::count_data_

private

Referenced by check_screen().

bool const protocols::stepwise::screener::BaseCentroidScreener::force_centroid_interaction_

private

Referenced by check_screen().

core::kinematics::Stub const& protocols::stepwise::screener::BaseCentroidScreener::moving_res_base_stub_

private

Referenced by check_screen().

core::pose::PoseOP protocols::stepwise::screener::BaseCentroidScreener::screening_pose_

private

Referenced by check_screen().

bool const protocols::stepwise::screener::BaseCentroidScreener::using_stub_

private

Referenced by check_screen().

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The documentation for this class was generated from the following files:

• src/protocols/stepwise/screener/BaseCentroidScreener.hh
• src/protocols/stepwise/screener/BaseCentroidScreener.cc