Rosetta Protocols  2014.35
Namespaces | Variables
KinematicAbinitio.cc File Reference

ab-initio fragment assembly protocol for proteins under the influence of contraints (e.g., NOE) More...

#include <protocols/abinitio/KinematicAbinitio.hh>
#include <protocols/jumping/JumpSetup.hh>
#include <protocols/jumping/JumpSample.hh>
#include <protocols/abinitio/ResolutionSwitcher.hh>
#include <protocols/simple_moves/FragmentMover.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/io/silent/ProteinSilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/types.hh>
#include <core/fragment/OrderedFragSet.hh>
#include <core/fragment/FragmentIO.hh>
#include <core/kinematics/MoveMap.hh>
#include <protocols/simple_moves/BackboneMover.hh>
#include <protocols/simple_moves/WobbleMover.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/jumping/PairingLibrary.hh>
#include <protocols/jumping/util.hh>
#include <protocols/loops/loop_closure/ccd/SlidingWindowLoopClosure.hh>
#include <protocols/loops/Exceptions.hh>
#include <protocols/constraints_additional/ConstraintEvaluator.hh>
#include <protocols/simple_filters/JumpEvaluator.hh>
#include <core/scoring/constraints/Constraint.fwd.hh>
#include <core/scoring/func/SkipViolFunc.hh>
#include <core/fragment/FragSet.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/FArray1D.hh>
#include <ObjexxFCL/FArray2D.hh>
#include <numeric/random/random.hh>
#include <utility/io/ozstream.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <basic/options/keys/jumps.OptionKeys.gen.hh>
#include <basic/options/keys/resample.OptionKeys.gen.hh>
#include <basic/options/keys/fold_cst.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/abinitio.OptionKeys.gen.hh>
#include <protocols/jobdist/Jobs.hh>
#include <protocols/idealize/IdealizeMover.hh>
#include <fstream>
#include <core/fragment/Frame.hh>
#include <core/fragment/FrameList.hh>
#include <core/io/silent/ProteinSilentStruct.tmpl.hh>
#include <protocols/constraints_additional/MaxSeqSepConstraintSet.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/moves/TrialMover.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::abinitio
 

Variables

static
numeric::random::RandomGenerator 
RG (198243)
 
static basic::Tracer tr ("protocols.abinitio", basic::t_info)
 

Detailed Description

ab-initio fragment assembly protocol for proteins under the influence of contraints (e.g., NOE)

Detailed:
Author
Oliver Lange

Variable Documentation

basic::Tracer tr("protocols.abinitio", basic::t_info)
static