Rosetta Protocols  2014.35
Classes | Typedefs | Functions | Variables
protocols::electron_density Namespace Reference

Classes

class  BfactorFittingMover
 mover to fit B factors More...
 
class  BfactorFittingMoverCreator
 
class  BfactorMultifunc
 Bfactor multifunc. More...
 
class  DensityMorphingMover
 
class  DensityMorphingMoverCreator
 
class  ReportFSC
 scale density map intensities to match a pose's More...
 
class  ReportFSCCreator
 
class  ScaleMapIntensities
 scale density map intensities to match a pose's More...
 
class  ScaleMapIntensitiesCreator
 
class  SetupForDensityScoringMover
 
class  SetupForDensityScoringMoverCreator
 

Typedefs

typedef
utility::pointer::owning_ptr
< SetupForDensityScoringMover
SetupForDensityScoringMoverOP
 

Functions

void symmetrizeBfactors (core::pose::Pose &pose)
 helper function More...
 
core::id::AtomID find_best_anchor (core::pose::Pose &pose)
 
void set_pose_and_scorefxn_for_edens_scoring (core::pose::Pose &pose, core::scoring::ScoreFunction &scorefxn)
 
protocols::loops::Loops findLoopFromPatterson (core::pose::Pose &pose, core::Size N, core::Size nloops, bool allow_termini)
 
protocols::loops::Loops findLoopFromDensity (core::pose::Pose &pose, core::Real frac, int max_helix_melt, int max_strand_melt)
 
core::Real dockPoseIntoMap (core::pose::Pose &pose, std::string align_in)
 
core::Real fastTransAlignPose (core::pose::Pose &pose)
 
core::Real fast2DRotAlignPose (core::pose::Pose &pose, std::string axis)
 

Variables

static basic::Tracer TR ("protocols.electron_density.util")
 
static basic::Tracer TR ("protocols.electron_density.util")
 

Typedef Documentation

Function Documentation

core::Real protocols::electron_density::dockPoseIntoMap ( core::pose::Pose pose,
std::string  align_in 
)
core::Real protocols::electron_density::fast2DRotAlignPose ( core::pose::Pose pose,
std::string  axis 
)
core::Real protocols::electron_density::fastTransAlignPose ( core::pose::Pose pose)
core::id::AtomID protocols::electron_density::find_best_anchor ( core::pose::Pose pose)
protocols::loops::Loops protocols::electron_density::findLoopFromDensity ( core::pose::Pose pose,
core::Real  frac,
int  max_helix_melt,
int  max_strand_melt 
)
protocols::loops::Loops protocols::electron_density::findLoopFromPatterson ( core::pose::Pose pose,
core::Size  N,
core::Size  nloops,
bool  allow_termini 
)
void protocols::electron_density::set_pose_and_scorefxn_for_edens_scoring ( core::pose::Pose pose,
core::scoring::ScoreFunction scorefxn 
)
void protocols::electron_density::symmetrizeBfactors ( core::pose::Pose pose)

Variable Documentation

basic::Tracer protocols::electron_density::TR("protocols.electron_density.util")
static
basic::Tracer protocols::electron_density::TR("protocols.electron_density.util")
static