Rosetta Protocols  2014.35
Namespaces | Functions | Variables
util.cc File Reference
#include <protocols/stepwise/modeler/working_parameters/util.hh>
#include <protocols/stepwise/modeler/working_parameters/StepWiseWorkingParameters.hh>
#include <protocols/stepwise/modeler/protein/util.hh>
#include <protocols/stepwise/legacy/modeler/rna/StepWiseRNA_WorkingParametersSetup.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/movemap/util.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <protocols/toolbox/AllowInsert.hh>
#include <protocols/stepwise/sampler/rna/util.hh>
#include <core/chemical/VariantType.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pose/Pose.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/pose/full_model_info/FullModelParameters.hh>
#include <core/pose/full_model_info/util.hh>
#include <core/pose/util.hh>
#include <utility/tools/make_vector1.hh>
#include <ObjexxFCL/string.functions.hh>
#include <utility/string_util.hh>
#include <utility/stream_util.hh>
#include <basic/Tracer.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::stepwise
 
 protocols::stepwise::modeler
 
 protocols::stepwise::modeler::working_parameters
 

Functions

StepWiseWorkingParametersOP protocols::stepwise::modeler::working_parameters::setup_working_parameters_for_swa (utility::vector1< Size > const &moving_res_list, pose::Pose const &pose, pose::PoseCOP native_pose, utility::vector1< Size > const &user_defined_bridge_res, utility::vector1< Size > const &working_minimize_res)
 
StepWiseWorkingParametersOP protocols::stepwise::modeler::working_parameters::setup_working_parameters_explicit (Size const rebuild_res, pose::Pose const &pose, pose::PoseCOP native_pose)
 
bool protocols::stepwise::modeler::working_parameters::figure_out_rebuild_bulge_mode (pose::Pose const &pose, Size const rebuild_res)
 
bool protocols::stepwise::modeler::working_parameters::figure_out_sample_both_sugar_base_rotamer (pose::Pose const &pose, bool const floating_base, Size const rebuild_suite)
 

Variables

static basic::Tracer TR ("protocols.stepwise.modeler.working_parameters.util")
 

Detailed Description

Detailed:
Author
Rhiju Das, rhiju.nosp@m.@sta.nosp@m.nford.nosp@m..edu

Variable Documentation

basic::Tracer TR("protocols.stepwise.modeler.working_parameters.util")
static