Rosetta Protocols  2014.35
abinitio Directory Reference
Directory dependency graph for abinitio:
src/protocols/abinitio

Directories

directory  abscript
 

Files

file  AbrelaxApplication.cc
 
file  AbrelaxApplication.hh
 Application-level code for Abrelax, fold_cst and JumpingFoldCst protocols.
 
file  AbrelaxMover.cc
 
file  AbrelaxMover.fwd.hh
 
file  AbrelaxMover.hh
 This class will be handled to a SampleProtocol as a control instance.
 
file  AllResiduesChanged.hh
 
file  BrokerMain.cc
 
file  BrokerMain.hh
 
file  ClassicAbinitio.cc
 ab-initio fragment assembly protocol for proteins
 
file  ClassicAbinitio.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  ClassicAbinitio.hh
 header file for ClassicAbinitio protocol
 
file  ConstraintFragmentSampler.cc
 ab-initio fragment assembly protocol for proteins
 
file  ConstraintFragmentSampler.hh
 header file for ConstraintFragmentSampler protocol
 
file  DomainAssembly.cc
 
file  DomainAssembly.hh
 
file  DomainAssemblyCreator.hh
 Declaration of the MoverCreator class for the DomainAssembly.
 
file  DoubleLayerKinematicAbinitio.cc
 this class will be handled to a SampleProtocol as a control instance
 
file  DoubleLayerKinematicAbinitio.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  DoubleLayerKinematicAbinitio.hh
 this class will be handled to a SampleProtocol as a control instance
 
file  FoldConstraints.cc
 ab-initio fragment assembly protocol for proteins under the influence of contraints (e.g., NOE)
 
file  FoldConstraints.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  FoldConstraints.hh
 
file  FragmentCost.hh
 set of fragments
 
file  FragmentSampler.cc
 ab-initio fragment assembly protocol for proteins
 
file  FragmentSampler.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  FragmentSampler.hh
 header file for FragmentSampler protocol
 
file  HedgeArchive.cc
 iterative protocol starting with ab initio and getting progressively more concerned with full-atom relaxed structures
 
file  HedgeArchive.fwd.hh
 
file  HedgeArchive.hh
 
file  IterativeAbrelax.cc
 iterative protocol starting with abinitio and getting progressively more concerned with full-atom relaxed structures
 
file  IterativeAbrelax.hh
 this class will be handled to a SampleProtocol as a control instance
 
file  IterativeBase.cc
 iterative protocol starting with abinitio and getting progressively more concerned with full-atom relaxed structures
 
file  IterativeBase.hh
 
file  IterativeCentroid.cc
 iterative protocol starting with abinitio and getting progressively more concerned with full-atom relaxed structures
 
file  IterativeCentroid.hh
 this class will be handled to a SampleProtocol as a control instance
 
file  IterativeFullatom.cc
 iterative protocol starting with abinitio and getting progressively more concerned with full-atom relaxed structures
 
file  IterativeFullatom.hh
 this class will be handled to a SampleProtocol as a control instance
 
file  JumpingFoldConstraints.hh
 Abinitio-Folding under (distance-)constraints.
 
file  KinematicAbinitio.cc
 ab-initio fragment assembly protocol for proteins under the influence of contraints (e.g., NOE)
 
file  KinematicAbinitio.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  KinematicAbinitio.hh
 Abinitio - Type sampling controlled by KinematicControl object.
 
file  KinematicControl.cc
 
file  KinematicControl.fwd.hh
 
file  KinematicControl.hh
 this class will be handled to a SampleProtocol as a control instance
 
file  KinematicTaskControl.cc
 this class will be handled to a SampleProtocol as a control instance
 
file  KinematicTaskControl.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  KinematicTaskControl.hh
 this class will be handled to a SampleProtocol as a control instance
 
file  LoopJumpFoldCst.cc
 this class will be handled to a SampleProtocol as a control instance
 
file  LoopJumpFoldCst.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  LoopJumpFoldCst.hh
 this class will be handled to a SampleProtocol as a control instance
 
file  MembraneAbinitio.cc
 ab-initio fragment assembly protocol for membrane proteins
 
file  MembraneAbinitio.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  MembraneAbinitio.hh
 header file for MembraneAbinitio protocol
 
file  PairingStatistics.cc
 
file  PairingStatistics.fwd.hh
 
file  PairingStatistics.hh
 
file  Protocol.cc
 
file  Protocol.fwd.hh
 
file  Protocol.hh
 initialization protocols for relax
 
file  ResolutionSwitcher.cc
 this class will be handled to a SampleProtocol as a control instance
 
file  ResolutionSwitcher.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  ResolutionSwitcher.hh
 initialization protocols for relax
 
file  StrandConstraints.cc
 
file  StrandConstraints.hh
 
file  Template.cc
 
file  Template.fwd.hh
 
file  Template.hh
 
file  TemplateJumpSetup.cc
 
file  TemplateJumpSetup.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  TemplateJumpSetup.hh
 
file  Templates.cc
 
file  Templates.fwd.hh
 
file  Templates.hh
 
file  vs_test.cc
 
file  vs_test.hh