Rosetta Protocols  2014.35
toolbox Directory Reference
Directory dependency graph for toolbox:
src/protocols/toolbox

Directories

directory  match_enzdes_util
 
directory  pose_manipulation
 
directory  pose_metric_calculators
 
directory  rotamer_set_operations
 
directory  task_operations
 

Files

file  AllowInsert.cc
 
file  AllowInsert.fwd.hh
 AllowInsert forward declarations header.
 
file  AllowInsert.hh
 
file  Cluster.cc
 header file for ThreadingJob classes, part of August 2008 job distributor as planned at RosettaCon08. This file is responsible for three ideas: "inner" jobs, "outer" jobs (with which the job distributor works) and job container (currently just typdefed in the .fwd.hh)
 
file  Cluster.hh
 
file  Cluster.impl.hh
 template implementation for clustering of silentstructs that are provided by iterators
 
file  DecoySetEvaluation.cc
 
file  DecoySetEvaluation.fwd.hh
 kinematics::ShortestPathInFoldTree forward declarations header
 
file  DecoySetEvaluation.hh
 
file  DecoySetEvaluation.impl.hh
 template implementation for clustering of silentstructs that are provided by iterators
 
file  IGEdgeReweighters.cc
 collection of routines to assign different weights to IG edges
 
file  IGEdgeReweighters.hh
 
file  InteratomicVarianceMatrix.cc
 header file for ThreadingJob classes, part of August 2008 job distributor as planned at RosettaCon08. This file is responsible for three ideas: "inner" jobs, "outer" jobs (with which the job distributor works) and job container (currently just typdefed in the .fwd.hh)
 
file  InteratomicVarianceMatrix.hh
 header file for ThreadingJob classes, part of August 2008 job distributor as planned at RosettaCon08. This file is responsible for three ideas: "inner" jobs, "outer" jobs (with which the job distributor works) and job container (currently just typdefed in the .fwd.hh)
 
file  KCluster.cc
 Fast clustering algorithm for large silent file.
 
file  KCluster.fwd.hh
 
file  KCluster.hh
 Fast clustering algorithm for large silent file.
 
file  NetworkAlgorithms.cc
 calculate various network properties from poses
 
file  NetworkAlgorithms.fwd.hh
 FOrward header for class that analyzes properties of residue networks.
 
file  NetworkAlgorithms.hh
 Computes network properties of a pose.
 
file  PyReturnValuePolicyTest.hh
 A few functions test how PyRosetta handle boost ReturnValuePolicy.
 
file  SelectResiduesByLayer.cc
 select residues depending on layer: core, boundary, and surface The layer of residues are defined by accessible sufrace area of CB + mainchain
 
file  SelectResiduesByLayer.fwd.hh
 
file  SelectResiduesByLayer.hh
 select residues depending on layer: core, boundary, and surface and the layer are defined by accessible sufrace area of each residue
 
file  superimpose.cc
 header file for ThreadingJob classes, part of August 2008 job distributor as planned at RosettaCon08. This file is responsible for three ideas: "inner" jobs, "outer" jobs (with which the job distributor works) and job container (currently just typdefed in the .fwd.hh)
 
file  superimpose.hh
 header file for ThreadingJob classes, part of August 2008 job distributor as planned at RosettaCon08. This file is responsible for three ideas: "inner" jobs, "outer" jobs (with which the job distributor works) and job container (currently just typdefed in the .fwd.hh)