Rosetta Protocols  2014.35
antibody Directory Reference
Directory dependency graph for antibody:
src/protocols/antibody

Directories

directory  clusters
 
directory  design
 
directory  snugdock
 

Files

file  Ab_TemplateInfo.cc
 grafts a cdr onto the template of an antibody framework
 
file  Ab_TemplateInfo.fwd.hh
 grafts a cdr onto the template of an antibody framework
 
file  Ab_TemplateInfo.hh
 grafts a cdr onto the template of an antibody framework
 
file  AntibodyEnum.hh
 Enumerators + TypeDefs for Antibody namespace.
 
file  AntibodyEnumManager.cc
 Functions for AntibodyEnumerators.
 
file  AntibodyEnumManager.fwd.hh
 
file  AntibodyEnumManager.hh
 Functions for AntibodyEnumerators.
 
file  AntibodyFeatures.cc
 
file  AntibodyFeatures.fwd.hh
 
file  AntibodyFeatures.hh
 
file  AntibodyFeaturesCreator.cc
 
file  AntibodyFeaturesCreator.hh
 
file  AntibodyInfo.cc
 Class for getting antibody-specific objects and information.
 
file  AntibodyInfo.fwd.hh
 AntibodyInfo class forward declarations header.
 
file  AntibodyInfo.hh
 Class for getting antibody-specific objects and information.
 
file  AntibodyModelerProtocol.cc
 Build a homology model of an antibody.
 
file  AntibodyModelerProtocol.fwd.hh
 forward declaration
 
file  AntibodyModelerProtocol.hh
 Build a homology model of an antibody.
 
file  AntibodyNumberingParser.cc
 
file  AntibodyNumberingParser.fwd.hh
 
file  AntibodyNumberingParser.hh
 Read Antibody Numbering schemes and transform info from the database.
 
file  CDRsMinPackMin.cc
 Build a homology model of an antibody.
 
file  CDRsMinPackMin.fwd.hh
 forward declaration
 
file  CDRsMinPackMin.hh
 Main CDR minimization method in protocols/antibody.
 
file  CloseOneCDRLoop.cc
 grafts a cdr onto the template of an antibody framework
 
file  CloseOneCDRLoop.fwd.hh
 
file  CloseOneCDRLoop.hh
 
file  GraftCDRLoopsProtocol.cc
 Build a homology model of an antibody.
 
file  GraftCDRLoopsProtocol.fwd.hh
 forward declaration
 
file  GraftCDRLoopsProtocol.hh
 Build a homology model of an antibody.
 
file  GraftedStemOptimizer.cc
 Optimize the CDR Grafted stem.
 
file  GraftedStemOptimizer.fwd.hh
 
file  GraftedStemOptimizer.hh
 Optimize the CDR Grafted stem.
 
file  GraftOneCDRLoop.cc
 grafts a cdr onto the template of an antibody framework
 
file  GraftOneCDRLoop.fwd.hh
 
file  GraftOneCDRLoop.hh
 grafts a cdr onto the template of an antibody framework
 
file  H3CterInsert.cc
 Build a homology model of an antibody.
 
file  H3CterInsert.fwd.hh
 Build a homology model of an antibody.
 
file  H3CterInsert.hh
 Build a homology model of an antibody.
 
file  H3PerturbCCD.cc
 Build a homology model of an antibody.
 
file  H3PerturbCCD.fwd.hh
 forward declaration
 
file  H3PerturbCCD.hh
 Build a homology model of an antibody.
 
file  H3RefineCCD.cc
 Build a homology model of an antibody.
 
file  H3RefineCCD.fwd.hh
 forward declaration
 
file  H3RefineCCD.hh
 Build a homology model of an antibody.
 
file  LHRepulsiveRamp.cc
 Build a homology model of an antibody.
 
file  LHRepulsiveRamp.fwd.hh
 forward declaration
 
file  LHRepulsiveRamp.hh
 Build a homology model of an antibody.
 
file  metrics.cc
 Routines to measure antibodies.
 
file  metrics.hh
 Routines to measure antibodies.
 
file  ModelCDRH3.cc
 models CDR H3 loop using loop modeling
 
file  ModelCDRH3.fwd.hh
 Build a homology model of an antibody.
 
file  ModelCDRH3.hh
 
file  RefineBetaBarrel.cc
 Build a homology model of an antibody.
 
file  RefineBetaBarrel.fwd.hh
 forward declaration
 
file  RefineBetaBarrel.hh
 Build a homology model of an antibody.
 
file  RefineOneCDRLoop.cc
 Build a homology model of an antibody.
 
file  RefineOneCDRLoop.fwd.hh
 forward declaration
 
file  RefineOneCDRLoop.hh
 Build a homology model of an antibody.
 
file  RefineOneCDRLoopCentroid.cc
 Build a homology model of an antibody.
 
file  RefineOneCDRLoopCentroid.fwd.hh
 forward declaration
 
file  RefineOneCDRLoopCentroid.hh
 Build a homology model of an antibody.
 
file  util.cc
 
file  util.hh
 Utility functions for the Antibody namespace.