Rosetta Protocols  2014.35
features Directory Reference
Directory dependency graph for features:
src/protocols/features

Directories

directory  helixAssembly
 
directory  strand_assembly
 

Files

file  AtomAtomPairFeatures.cc
 report atom-atom pair geometry and scores to features statistics scientific benchmark
 
file  AtomAtomPairFeatures.fwd.hh
 report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  AtomAtomPairFeatures.hh
 report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  AtomAtomPairFeaturesCreator.cc
 Header for AtomAtomPairFeaturesCreator for the AtomAtomPairFeatures load-time factory registration scheme.
 
file  AtomAtomPairFeaturesCreator.hh
 Header for AtomAtomPairFeaturesCreator for the AtomAtomPairFeatures load-time factory registration scheme.
 
file  AtomInResidueAtomInResiduePairFeatures.cc
 report atom-atom pair geometry and scores to features statistics scientific benchmark
 
file  AtomInResidueAtomInResiduePairFeatures.fwd.hh
 report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  AtomInResidueAtomInResiduePairFeatures.hh
 report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  AtomInResidueAtomInResiduePairFeaturesCreator.cc
 Header for AtomInResidueAtomInResiduePairFeaturesCreator for the AtomInResidueAtomInResiduePairFeatures load-time factory registration scheme.
 
file  AtomInResidueAtomInResiduePairFeaturesCreator.hh
 Header for AtomInResidueAtomInResiduePairFeaturesCreator for the AtomInResidueAtomInResiduePairFeatures load-time factory registration scheme.
 
file  AtomTypesFeatures.cc
 report AtomType properties to features Statistics Scientific Benchmark
 
file  AtomTypesFeatures.fwd.hh
 report AtomTypes geometry and scores to features Statistics Scientific Benchmark
 
file  AtomTypesFeatures.hh
 report AtomType features Statistics Scientific Benchmark
 
file  AtomTypesFeaturesCreator.cc
 Header for AtomTypesFeaturesCreator for the AtomTypesFeatures load-time factory registration scheme.
 
file  AtomTypesFeaturesCreator.hh
 Header for AtomTypesFeaturesCreator for the AtomTypesFeatures load-time factory registration scheme.
 
file  BatchFeatures.cc
 
file  BatchFeatures.fwd.hh
 
file  BatchFeatures.hh
 
file  BatchFeaturesCreator.cc
 
file  BatchFeaturesCreator.hh
 
file  BetaTurnDetectionFeatures.cc
 report comments stored with each pose
 
file  BetaTurnDetectionFeatures.fwd.hh
 report residue level geometry and scores to features Statistics Scientific Benchmark
 
file  BetaTurnDetectionFeatures.hh
 report comments stored with each pose
 
file  BetaTurnDetectionFeaturesCreator.cc
 Header for BetaTurnDetectionFeaturesCreator for the BetaTurnDetectionFeatures load-time factory registration scheme.
 
file  BetaTurnDetectionFeaturesCreator.hh
 Header for BetaTurnDetectionFeaturesCreator for the BetaTurnDetectionFeatures load-time factory registration scheme.
 
file  ChargeChargeFeatures.cc
 report geometric solvation energy for each polar site to a features database
 
file  ChargeChargeFeatures.fwd.hh
 report geometric solvation for each polar site to features Statistics Scientific Benchmark
 
file  ChargeChargeFeatures.hh
 report comments stored with each pose
 
file  ChargeChargeFeaturesCreator.cc
 Header for ChargeChargeFeaturesCreator for the ChargeChargeFeatures load-time factory registration scheme.
 
file  ChargeChargeFeaturesCreator.hh
 Header for ChargeChargeFeaturesCreator for the ChargeChargeFeatures load-time factory registration scheme.
 
file  DatabaseFilters.cc
 report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  DatabaseFilters.fwd.hh
 report data to database
 
file  DatabaseFilters.hh
 report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  DatabaseJobInputter.cc
 
file  DatabaseJobInputter.fwd.hh
 
file  DatabaseJobInputter.hh
 header file for DatabaseJobInputter class
 
file  DatabaseJobInputterCreator.hh
 
file  DatabaseJobOutputter.cc
 Job Outputter to a database.
 
file  DatabaseJobOutputter.fwd.hh
 header file for DatabaseJobOutputter class
 
file  DatabaseJobOutputter.hh
 header file for DatabaseJobOutputter class
 
file  DatabaseJobOutputterCreator.hh
 
file  DatabaseStatements.cc
 
file  DatabaseStatements.hh
 
file  FeaturesReporter.cc
 Base class to report geometry and scores to features Statistics Scientific Benchmark.
 
file  FeaturesReporter.fwd.hh
 report data to database
 
file  FeaturesReporter.hh
 Base class to report geometry and scores to features Statistics Scientific Benchmark.
 
file  FeaturesReporterCreator.fwd.hh
 Forward Header for base class for FeaturesReporterCreators for the FeaturesReporter load-time factory registration scheme.
 
file  FeaturesReporterCreator.hh
 Base class for FeaturesReporterCreators for the FeaturesReporter load-time factory registration scheme.
 
file  FeaturesReporterFactory.cc
 Factory for creating FeaturesReporters objects.
 
file  FeaturesReporterFactory.fwd.hh
 report data to database
 
file  FeaturesReporterFactory.hh
 Factory for creating FeaturesReporter objects.
 
file  GeometricSolvationFeatures.cc
 report geometric solvation energy for each polar site to a features database
 
file  GeometricSolvationFeatures.fwd.hh
 report geometric solvation for each polar site to features Statistics Scientific Benchmark
 
file  GeometricSolvationFeatures.hh
 report hydrogen bonding based solvation model to a features database
 
file  GeometricSolvationFeaturesCreator.cc
 Header for GeometricSolvationFeaturesCreator for the GeometricSolvationFeatures load-time factory registration scheme.
 
file  GeometricSolvationFeaturesCreator.hh
 Header for GeometricSolvationFeaturesCreator for the GeometricSolvationFeatures load-time factory registration scheme.
 
file  HBondFeatures.cc
 report HBond geometry and scores to features Statistics Scientific Benchmark
 
file  HBondFeatures.fwd.hh
 report HBond geometry and scores to features Statistics Scientific Benchmark
 
file  HBondFeatures.hh
 report HBond geometry and scores to features Statistics Scientific Benchmark
 
file  HBondFeaturesCreator.cc
 Header for HBondFeaturesCreator for the HBondFeatures load-time factory registration scheme.
 
file  HBondFeaturesCreator.hh
 Header for HBondFeaturesCreator for the HBondFeatures load-time factory registration scheme.
 
file  HBondParameterFeatures.cc
 report HBond Parameters to features Statistics Scientific Benchmark
 
file  HBondParameterFeatures.fwd.hh
 report HBondParameter geometry and scores to features Statistics Scientific Benchmark
 
file  HBondParameterFeatures.hh
 report HBond Parameter features Statistics Scientific Benchmark
 
file  HBondParameterFeaturesCreator.cc
 Header for HBondParameterFeaturesCreator for the HBondParameterFeatures load-time factory registration scheme.
 
file  HBondParameterFeaturesCreator.hh
 Header for HBondParameterFeaturesCreator for the HBondParameterFeatures load-time factory registration scheme.
 
file  HelixCapFeatures.cc
 
file  HelixCapFeatures.fwd.hh
 
file  HelixCapFeatures.hh
 
file  HelixCapFeaturesCreator.cc
 
file  HelixCapFeaturesCreator.hh
 
file  InterfaceFeatures.cc
 
file  InterfaceFeatures.fwd.hh
 
file  InterfaceFeatures.hh
 Analyzes interfaces and interface residues of a pose mainly using InterfaceAnalayzerMover.
 
file  InterfaceFeaturesCreator.cc
 
file  InterfaceFeaturesCreator.hh
 
file  JobDataFeatures.cc
 
file  JobDataFeatures.fwd.hh
 
file  JobDataFeatures.hh
 
file  JobDataFeaturesCreator.cc
 Header for JobDataFeaturesCreator for the JobDataFeatures load-time factory registration scheme.
 
file  JobDataFeaturesCreator.hh
 Header for JobDataFeaturesCreator for the JobDataFeatures load-time factory registration scheme.
 
file  LoopAnchorFeatures.cc
 report loop anchor features to a features database
 
file  LoopAnchorFeatures.fwd.hh
 report residue level geometry and scores to features Statistics Scientific Benchmark
 
file  LoopAnchorFeatures.hh
 report comments stored with each pose
 
file  LoopAnchorFeaturesCreator.cc
 Header for LoopAnchorFeaturesCreator for the LoopAnchorFeatures load-time factory registration scheme.
 
file  LoopAnchorFeaturesCreator.hh
 Header for LoopAnchorFeaturesCreator for the LoopAnchorFeatures load-time factory registration scheme.
 
file  OrbitalsFeatures.cc
 report orbital geometry and scores to features statistics scientific benchmark
 
file  OrbitalsFeatures.fwd.hh
 report Orbital geometry and scores to features Statistics Scientific Benchmark
 
file  OrbitalsFeatures.hh
 report Orbital geometry and scores to features Statistics Scientific Benchmark
 
file  OrbitalsFeaturesCreator.cc
 Header for OrbitalsFeaturesCreator for the OrbitalsFeatures load-time factory registration scheme.
 
file  OrbitalsFeaturesCreator.hh
 Header for OrbitalsFeaturesCreator for the OrbitalsFeatures load-time factory registration scheme.
 
file  PairFeatures.cc
 report orbital geometry and scores to features statistics scientific benchmark
 
file  PairFeatures.fwd.hh
 report atom-atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  PairFeatures.hh
 report residue and atom pair geometry and scores to features Statistics Scientific Benchmark
 
file  PairFeaturesCreator.cc
 Header for PairFeaturesCreator for the PairFeatures load-time factory registration scheme.
 
file  PairFeaturesCreator.hh
 Header for PairFeaturesCreator for the PairFeatures load-time factory registration scheme.
 
file  PdbDataFeatures.cc
 
file  PdbDataFeatures.fwd.hh
 
file  PdbDataFeatures.hh
 
file  PdbDataFeaturesCreator.cc
 Header for PdbDataFeaturesCreator for the PdbDataFeatures load-time factory registration scheme.
 
file  PdbDataFeaturesCreator.hh
 Header for PdbDataFeaturesCreator for the PdbDataFeatures load-time factory registration scheme.
 
file  PoseCommentsFeatures.cc
 report comments stored with each pose
 
file  PoseCommentsFeatures.fwd.hh
 report residue level geometry and scores to features Statistics Scientific Benchmark
 
file  PoseCommentsFeatures.hh
 report comments stored with each pose
 
file  PoseCommentsFeaturesCreator.cc
 Header for PoseCommentsFeaturesCreator for the PoseCommentsFeatures load-time factory registration scheme.
 
file  PoseCommentsFeaturesCreator.hh
 Header for PoseCommentsFeaturesCreator for the PoseCommentsFeatures load-time factory registration scheme.
 
file  PoseConformationFeatures.cc
 report comments stored with each pose
 
file  PoseConformationFeatures.fwd.hh
 report pose fold tree related features
 
file  PoseConformationFeatures.hh
 report comments stored with each pose
 
file  PoseConformationFeaturesCreator.cc
 Header for PoseConformationFeaturesCreator for the PoseConformationFeatures load-time factory registration scheme.
 
file  PoseConformationFeaturesCreator.hh
 Header for PoseConformationFeaturesCreator for the PoseConformationFeatures load-time factory registration scheme.
 
file  ProteinBackboneAtomAtomPairFeatures.cc
 report atom-atom pair distances between atoms in protein backbones to features Statistics Scientific Benchmark
 
file  ProteinBackboneAtomAtomPairFeatures.fwd.hh
 report atom-atom pair distances between atoms in protein backbones to features Statistics Scientific Benchmark
 
file  ProteinBackboneAtomAtomPairFeatures.hh
 report atom-atom pair distances between atoms in protein backbones to features Statistics Scientific Benchmark
 
file  ProteinBackboneAtomAtomPairFeaturesCreator.cc
 Header for ProteinBackboneAtomAtomPairFeaturesCreator for the ProteinBackboneAtomAtomPairFeatures load-time factory registration scheme.
 
file  ProteinBackboneAtomAtomPairFeaturesCreator.hh
 Header for ProteinBackboneAtomAtomPairFeaturesCreator for the ProteinBackboneAtomAtomPairFeatures load-time factory registration scheme.
 
file  ProteinBackboneTorsionAngleFeatures.cc
 report Backbone Torsional Angle features
 
file  ProteinBackboneTorsionAngleFeatures.fwd.hh
 report protein backbone torsion angle features
 
file  ProteinBackboneTorsionAngleFeatures.hh
 report protein backbone torsion angle features
 
file  ProteinBackboneTorsionAngleFeaturesCreator.cc
 Header for ProteinBackboneTorsionAngleFeaturesCreator for the ProteinBackboneTorsionAngleFeatures load-time factory registration scheme.
 
file  ProteinBackboneTorsionAngleFeaturesCreator.hh
 Header for ProteinBackboneTorsionAngleFeaturesCreator for the ProteinBackboneTorsionAngleFeatures load-time factory registration scheme.
 
file  ProteinBondGeometryFeatures.cc
 report Backbone Torsional Angle features
 
file  ProteinBondGeometryFeatures.fwd.hh
 report protein bond geometry features
 
file  ProteinBondGeometryFeatures.hh
 report protein backbone torsion angle features
 
file  ProteinBondGeometryFeaturesCreator.cc
 Header for ProteinBondGeometryFeaturesCreator for the ProteinBondGeometryFeatures load-time factory registration scheme.
 
file  ProteinBondGeometryFeaturesCreator.hh
 Header for ProteinBondGeometryFeaturesCreator for the ProteinBondGeometryFeatures load-time factory registration scheme.
 
file  ProteinResidueConformationFeatures.cc
 report idealized torsional DOFs Statistics Scientific Benchmark
 
file  ProteinResidueConformationFeatures.fwd.hh
 report residue level geometry and scores to features Statistics Scientific Benchmark
 
file  ProteinResidueConformationFeatures.hh
 report idealized torsional DOFs Statistics Scientific Benchmark
 
file  ProteinResidueConformationFeaturesCreator.cc
 Header for ProteinResidueConformationFeaturesCreator for the ProteinResidueConformationFeatures load-time factory registration scheme.
 
file  ProteinResidueConformationFeaturesCreator.hh
 Header for ProteinResidueConformationFeaturesCreator for the ProteinResidueConformationFeatures load-time factory registration scheme.
 
file  ProteinRMSDFeatures.cc
 report the root mean squared deviation between two poses
 
file  ProteinRMSDFeatures.fwd.hh
 report RMSD similarity of a protein structure against supplied reference structure
 
file  ProteinRMSDFeatures.hh
 report ProteinRMSD similarity of structure against supplied reference structure
 
file  ProteinRMSDFeaturesCreator.cc
 Header for ProteinRMSDFeaturesCreator for the ProteinRMSDFeatures load-time factory registration scheme.
 
file  ProteinRMSDFeaturesCreator.hh
 Header for ProteinRMSDFeaturesCreator for the ProteinRMSDFeatures load-time factory registration scheme.
 
file  ProteinRMSDNoSuperpositionFeatures.cc
 report the root mean squared deviation (without superposition) between two poses
 
file  ProteinRMSDNoSuperpositionFeatures.fwd.hh
 report (no superposition) RMSD similarity of a protein structure against supplied reference structure
 
file  ProteinRMSDNoSuperpositionFeatures.hh
 report ProteinRMSD similarity of structure against supplied reference structure without superposition
 
file  ProteinRMSDNoSuperpositionFeaturesCreator.cc
 Header for ProteinRMSDNoSuperpositionFeaturesCreator for the ProteinRMSDNoSuperpositionFeatures load-time factory registration scheme.
 
file  ProteinRMSDNoSuperpositionFeaturesCreator.hh
 Header for ProteinRMSDNoSuperpositionFeaturesCreator for the ProteinRMSDNoSuperpositionFeatures load-time factory registration scheme.
 
file  ProteinSilentReport.cc
 report feature data to database
 
file  ProteinSilentReport.fwd.hh
 report pose fold tree related features
 
file  ProteinSilentReport.hh
 report feature data to database
 
file  ProtocolFeatures.cc
 report protocol level features to features statistics scientific benchmark
 
file  ProtocolFeatures.fwd.hh
 report Orbital geometry and scores to features Statistics Scientific Benchmark
 
file  ProtocolFeatures.hh
 report Orbital geometry and scores to features Statistics Scientific Benchmark
 
file  ProtocolFeaturesCreator.cc
 Header for ProtocolFeaturesCreator for the ProtocolFeatures load-time factory registration scheme.
 
file  ProtocolFeaturesCreator.hh
 Header for ProtocolFeaturesCreator for the ProtocolFeatures load-time factory registration scheme.
 
file  RadiusOfGyrationFeatures.cc
 report the radius of gyration to features Statistics Scientific Benchmark
 
file  RadiusOfGyrationFeatures.fwd.hh
 report the radius of gyration to features Statistics Scientific Benchmark
 
file  RadiusOfGyrationFeatures.hh
 report the radius of gyration to features Statistics Scientific Benchmark
 
file  RadiusOfGyrationFeaturesCreator.cc
 Header for RadiusOfGyrationFeaturesCreator for the RadiusOfGyrationFeatures load-time factory registration scheme.
 
file  RadiusOfGyrationFeaturesCreator.hh
 Header for RadiusOfGyrationFeaturesCreator for the RadiusOfGyrationFeatures load-time factory registration scheme.
 
file  Report.cc
 report feature data to database
 
file  Report.fwd.hh
 report pose fold tree related features
 
file  Report.hh
 report feature data to database
 
file  ReportToDB.cc
 report all data to a database
 
file  ReportToDB.fwd.hh
 report data to sqlite database
 
file  ReportToDB.hh
 report feature data to sqlite database
 
file  ReportToDBCreator.hh
 This class will create instances of Mover ReportToDB for the MoverFactory.
 
file  ResidueBurialFeatures.cc
 report residue burial to features statistics scientific benchmark
 
file  ResidueBurialFeatures.fwd.hh
 report residue level geometry and scores to features Statistics Scientific Benchmark
 
file  ResidueBurialFeatures.hh
 report residue to features Statistics Scientific Benchmark
 
file  ResidueBurialFeaturesCreator.cc
 Header for ResidueBurialFeaturesCreator for the ResidueBurialFeatures load-time factory registration scheme.
 
file  ResidueBurialFeaturesCreator.hh
 Header for ResidueBurialFeaturesCreator for the ResidueBurialFeatures load-time factory registration scheme.
 
file  ResidueConformationFeatures.cc
 report idealized torsional DOFs Statistics Scientific Benchmark
 
file  ResidueConformationFeatures.fwd.hh
 report residue level geometry and scores to features Statistics Scientific Benchmark
 
file  ResidueConformationFeatures.hh
 report idealized torsional DOFs Statistics Scientific Benchmark
 
file  ResidueConformationFeaturesCreator.cc
 Header for ResidueConformationFeaturesCreator for the ResidueConformationFeatures load-time factory registration scheme.
 
file  ResidueConformationFeaturesCreator.hh
 Header for ResidueConformationFeaturesCreator for the ResidueConformationFeatures load-time factory registration scheme.
 
file  ResidueFeatures.cc
 report residue features to features Statistics Scientific Benchmark
 
file  ResidueFeatures.fwd.hh
 report residue features to features Statistics Scientific Benchmark
 
file  ResidueFeatures.hh
 report residue to features Statistics Scientific Benchmark
 
file  ResidueFeaturesCreator.cc
 Header for ResidueFeaturesCreator for the ResidueFeatures load-time factory registration scheme.
 
file  ResidueFeaturesCreator.hh
 Header for ResidueFeaturesCreator for the ResidueFeatures load-time factory registration scheme.
 
file  ResidueGridScoresFeatures.cc
 detailed per atom scores of Scoring Grids
 
file  ResidueGridScoresFeatures.fwd.hh
 detailed per atom scores of Scoring Grids
 
file  ResidueGridScoresFeatures.hh
 detailed per atom scores of Scoring Grids
 
file  ResidueGridScoresFeaturesCreator.hh
 detailed per atom scores of Scoring Grids
 
file  ResidueScoresFeatures.cc
 report residue scores to features Statistics Scientific Benchmark
 
file  ResidueScoresFeatures.fwd.hh
 report residue scores to features Statistics Scientific Benchmark
 
file  ResidueScoresFeatures.hh
 report residue scores to features Statistics Scientific Benchmark
 
file  ResidueScoresFeaturesCreator.cc
 Header for ResidueScoresFeaturesCreator for the ResidueScoresFeatures load-time factory registration scheme.
 
file  ResidueScoresFeaturesCreator.hh
 Header for ResidueScoresFeaturesCreator for the ResidueScoresFeatures load-time factory registration scheme.
 
file  ResidueSecondaryStructureFeatures.cc
 report ResidueSecondaryStructure geometry and scores to features Statistics Scientific Benchmark
 
file  ResidueSecondaryStructureFeatures.fwd.hh
 report ResidueSecondaryStructure geometry and scores to features Statistics Scientific Benchmark
 
file  ResidueSecondaryStructureFeatures.hh
 report ResidueSecondaryStructure geometry and scores to features Statistics Scientific Benchmark
 
file  ResidueSecondaryStructureFeaturesCreator.cc
 Header for ResidueSecondaryStructureFeaturesCreator for the ResidueSecondaryStructureFeatures load-time factory registration scheme.
 
file  ResidueSecondaryStructureFeaturesCreator.hh
 Header for ResidueSecondaryStructureFeaturesCreator for the ResidueSecondaryStructureFeatures load-time factory registration scheme.
 
file  ResidueTotalScoresFeatures.cc
 report the total per residue score to a features database
 
file  ResidueTotalScoresFeatures.fwd.hh
 report the total per residue score to a features database
 
file  ResidueTotalScoresFeatures.hh
 report the total per residue score to a features database
 
file  ResidueTotalScoresFeaturesCreator.cc
 Header for ResidueTotalScoresFeaturesCreator for the FeaturesReporter load-time factory registration scheme.
 
file  ResidueTotalScoresFeaturesCreator.hh
 Header for ResidueTotalScoresFeaturesCreator for the ResidueTotalScoresFeatures load-time factory registration scheme.
 
file  ResidueTypesFeatures.cc
 report ResidueTypes to features Statistics Scientific Benchmark
 
file  ResidueTypesFeatures.fwd.hh
 report ResidueTypes geometry and scores to features Statistics Scientific Benchmark
 
file  ResidueTypesFeatures.hh
 report ResidueTypes features Statistics Scientific Benchmark
 
file  ResidueTypesFeaturesCreator.cc
 Header for ResidueTypesFeaturesCreator for the ResidueTypesFeatures load-time factory registration scheme.
 
file  ResidueTypesFeaturesCreator.hh
 Header for ResidueTypesFeaturesCreator for the ResidueTypesFeatures load-time factory registration scheme.
 
file  RotamerBoltzmannWeightFeatures.cc
 report residue burial to features statistics scientific benchmark
 
file  RotamerBoltzmannWeightFeatures.fwd.hh
 report rotamer boltzmann weights to features Statistics Scientific Benchmark
 
file  RotamerBoltzmannWeightFeatures.hh
 report rotamer boltzmann weights to features Statistics Scientific Benchmark
 
file  RotamerBoltzmannWeightFeaturesCreator.cc
 Header for RotamerBoltzmannWeightFeaturesCreator for the RotamerBoltzmannWeightFeatures load-time factory registration scheme.
 
file  RotamerBoltzmannWeightFeaturesCreator.hh
 Header for RotamerBoltzmannWeightFeaturesCreator for the RotamerBoltzmannWeightFeatures load-time factory registration scheme.
 
file  RotamerFeatures.cc
 report rotamer library features to the database
 
file  RotamerFeatures.fwd.hh
 report residue level geometry and scores to features Statistics Scientific Benchmark
 
file  RotamerFeatures.hh
 report idealized torsional DOFs Statistics Scientific Benchmark
 
file  RotamerFeaturesCreator.cc
 Header for RotamerFeaturesCreator for the RotamerFeatures load-time factory registration scheme.
 
file  RotamerFeaturesCreator.hh
 Header for RotamerFeaturesCreator for the RotamerFeatures load-time factory registration scheme.
 
file  RotamerRecoveryFeatures.cc
 report rotamer recover features and scores to features Statistics Scientific Benchmark
 
file  RotamerRecoveryFeatures.fwd.hh
 report Rotamer Recovery features to features Statistics Scientific Benchmark
 
file  RotamerRecoveryFeatures.hh
 report Rotamer Recovery Statistics Scientific Benchmark
 
file  RotamerRecoveryFeaturesCreator.cc
 Header for RotamerRecoveryFeaturesCreator for the RotamerRecoveryFeatures load-time factory registration scheme.
 
file  RotamerRecoveryFeaturesCreator.hh
 Header for RotamerRecoveryFeaturesCreator for the RotamerRecoveryFeatures load-time factory registration scheme.
 
file  SaltBridgeFeatures.cc
 report geometric solvation energy for each polar site to a features database
 
file  SaltBridgeFeatures.fwd.hh
 report geometric solvation for each polar site to features Statistics Scientific Benchmark
 
file  SaltBridgeFeatures.hh
 report comments stored with each pose
 
file  SaltBridgeFeaturesCreator.cc
 Header for SaltBridgeFeaturesCreator for the SaltBridgeFeatures load-time factory registration scheme.
 
file  SaltBridgeFeaturesCreator.hh
 Header for SaltBridgeFeaturesCreator for the SaltBridgeFeatures load-time factory registration scheme.
 
file  ScoreFunctionFeatures.cc
 report the score parameters to a features database
 
file  ScoreFunctionFeatures.fwd.hh
 Structure scores to features Statistics Scientific Benchmark.
 
file  ScoreFunctionFeatures.hh
 Add score function parameters to a features database.
 
file  ScoreFunctionFeaturesCreator.cc
 Header for ScoreFunctionFeaturesCreator for the ScoreFunctionFeatures load-time factory registration scheme.
 
file  ScoreFunctionFeaturesCreator.hh
 Header for ScoreFunctionFeaturesCreator for the ScoreFunctionFeatures load-time factory registration scheme.
 
file  ScoreTypeFeatures.cc
 report protocol level features to features statistics scientific benchmark
 
file  ScoreTypeFeatures.fwd.hh
 Structure scores to features Statistics Scientific Benchmark.
 
file  ScoreTypeFeatures.hh
 Structure scores to features Statistics Scientific Benchmark.
 
file  ScoreTypeFeaturesCreator.cc
 Header for ScoreTypeFeaturesCreator for the ScoreTypeFeatures load-time factory registration scheme.
 
file  ScoreTypeFeaturesCreator.hh
 Header for ScoreTypeFeaturesCreator for the ScoreTypeFeatures load-time factory registration scheme.
 
file  ScreeningFeatures.cc
 report JSON object with information needed for vHTS postprocessing
 
file  ScreeningFeatures.fwd.hh
 forward headers for ScreeningFeatuers
 
file  ScreeningFeatures.hh
 report JSON object with information needed for vHTS postprocessing.
 
file  ScreeningFeaturesCreator.cc
 
file  ScreeningFeaturesCreator.hh
 
file  SecondaryStructureSegmentFeatures.cc
 
file  SecondaryStructureSegmentFeatures.fwd.hh
 
file  SecondaryStructureSegmentFeatures.hh
 
file  SecondaryStructureSegmentFeaturesCreator.cc
 
file  SecondaryStructureSegmentFeaturesCreator.hh
 
file  SmotifFeatures.cc
 Calculate 4 geometric values used to classify smotifs. Reference (http://www.ncbi.nlm.nih.gov/pubmed/20421995)
 
file  SmotifFeatures.fwd.hh
 
file  SmotifFeatures.hh
 
file  SmotifFeaturesCreator.cc
 
file  SmotifFeaturesCreator.hh
 
file  StructureFeatures.cc
 report protocol level features to features statistics scientific benchmark
 
file  StructureFeatures.fwd.hh
 report structure features to features Statistics Scientific Benchmark
 
file  StructureFeatures.hh
 report structure identifiers to a features database
 
file  StructureFeaturesCreator.cc
 Header for StructureFeaturesCreator for the StructureFeatures load-time factory registration scheme.
 
file  StructureFeaturesCreator.hh
 Header for StructureFeaturesCreator for the StructureFeatures load-time factory registration scheme.
 
file  StructureScoresFeatures.cc
 report structure score features to a features database
 
file  StructureScoresFeatures.fwd.hh
 Structure scores to features Statistics Scientific Benchmark.
 
file  StructureScoresFeatures.hh
 Structure scores to features Statistics Scientific Benchmark.
 
file  StructureScoresFeaturesCreator.cc
 Header for StructureScoresFeaturesCreator for the StructureScoresFeatures load-time factory registration scheme.
 
file  StructureScoresFeaturesCreator.hh
 Header for StructureScoresFeaturesCreator for the StructureScoresFeatures load-time factory registration scheme.
 
file  TaskOperationFeatures.cc
 report
 
file  TaskOperationFeatures.fwd.hh
 report
 
file  TaskOperationFeatures.hh
 report
 
file  TaskOperationFeaturesCreator.cc
 Header.
 
file  TaskOperationFeaturesCreator.hh
 Header.
 
file  TrajectoryMapFeatures.cc
 Map trajectory structure_ids to cycle number.
 
file  TrajectoryMapFeatures.fwd.hh
 Map trajectory structure_ids to cycle number.
 
file  TrajectoryMapFeatures.hh
 Map trajectory structure_ids to cycle number.
 
file  TrajectoryMapFeaturesCreator.cc
 Header for TrajectoryMapFeaturesCreator for the TrajectoryMapFeatures load-time factory registration scheme.
 
file  TrajectoryMapFeaturesCreator.hh
 Header for TrajectoryMapFeaturesCreator for the TrajectoryMapFeatures load-time factory registration scheme.
 
file  TrajectoryReportToDB.cc
 Report features data to database multiple times per structure, creating a trajectory.
 
file  TrajectoryReportToDB.fwd.hh
 Report features data to database multiple times per structure, creating a trajectory.
 
file  TrajectoryReportToDB.hh
 Report features data to database multiple times per structure, creating a trajectory.
 
file  TrajectoryReportToDBCreator.hh
 This class will create instances of Mover TrajectoryReportToDB for the MoverFactory.
 
file  UnrecognizedAtomFeatures.cc
 report unrecognized atoms features to features Statistics Scientific Benchmark
 
file  UnrecognizedAtomFeatures.fwd.hh
 report residue features to features Statistics Scientific Benchmark
 
file  UnrecognizedAtomFeatures.hh
 report residue to features Statistics Scientific Benchmark
 
file  UnrecognizedAtomFeaturesCreator.cc
 Header for UnrecognizedAtomFeaturesCreator for the UnrecognizedAtomFeatures load-time factory registration scheme.
 
file  UnrecognizedAtomFeaturesCreator.hh
 Header for UnrecognizedAtomFeaturesCreator for the UnrecognizedAtomFeatures load-time factory registration scheme.
 
file  util.cc
 
file  util.hh
 
file  WaterFeatures.cc
 
file  WaterFeatures.fwd.hh
 
file  WaterFeatures.hh
 report geometry between water and hbond sites
 
file  WaterFeaturesCreator.cc
 Header for WaterFeaturesCreator for the WaterFeatures load-time factory registration scheme.
 
file  WaterFeaturesCreator.hh
 Header for WaterFeaturesCreator for the WaterFeatures load-time factory registration scheme.